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Items: 1 to 50 of 64

1.

Single gold nanoparticle plasmonic spectroscopy for study of chemical-dependent efflux function of single ABC transporters of single live Bacillus subtilis cells.

Browning LM, Lee KJ, Cherukuri PK, Huang T, Songkiatisak P, Warren S, Xu XN.

Analyst. 2018 Mar 26;143(7):1599-1608. doi: 10.1039/c7an01787a.

2.

Size-Dependent Inhibitory Effects of Antibiotic Drug Nanocarriers against Pseudomonas aeruginosa.

Ding F, Songkiatisak P, Cherukuri PK, Huang T, Xu XN.

ACS Omega. 2018 Jan 31;3(1):1231-1243. doi: 10.1021/acsomega.7b01956. Epub 2018 Jan 30.

3.

A prospective study of diffusion weighted magnetic resonance imaging abnormalities in patients with cluster of seizures and status epilepticus.

Jabeen SA, Cherukuri P, Mridula R, Harshavardhana KR, Gaddamanugu P, Sarva S, Meena AK, Borgohain R, Jyotsna Rani Y.

Clin Neurol Neurosurg. 2017 Apr;155:70-74. doi: 10.1016/j.clineuro.2017.02.013. Epub 2017 Feb 24.

PMID:
28267656
4.

Single Nanoparticle Plasmonic Spectroscopy for Study of Charge-Dependent Efflux Function of Multidrug ABC Transporters of Single Live Bacillus subtilis Cells.

Browning LM, Lee KJ, Nallathamby PD, Cherukuri PK, Huang T, Warren S, Xu XN.

J Phys Chem C Nanomater Interfaces. 2016 Sep 22;120(37):21007-21016. doi: 10.1021/acs.jpcc.6b03313. Epub 2016 May 26.

5.

Single Nanoparticle Plasmonic Spectroscopy for Study of the Efflux Function of Multidrug ABC Membrane Transporters of Single Live Cells.

Browning LM, Lee KJ, Cherukuri PK, Nallathamby PD, Warren S, Jault JM, Xu XN.

RSC Adv. 2016;6(43):36794-36802. Epub 2016 Mar 30.

6.

Complex translocation disrupting TCF4 and altering TCF4 isoform expression segregates as mild autosomal dominant intellectual disability.

Maduro V, Pusey BN, Cherukuri PF, Atkins P, du Souich C, Rupps R, Limbos M, Adams DR, Bhatt SS, Eydoux P, Links AE, Lehman A, Malicdan MC, Mason CE, Morimoto M, Mullikin JC, Sear A, Van Karnebeek C, Stankiewicz P, Gahl WA, Toro C, Boerkoel CF.

Orphanet J Rare Dis. 2016 May 14;11(1):62. doi: 10.1186/s13023-016-0439-6.

7.

Teslaphoresis of Carbon Nanotubes.

Bornhoeft LR, Castillo AC, Smalley PR, Kittrell C, James DK, Brinson BE, Rybolt TR, Johnson BR, Cherukuri TK, Cherukuri P.

ACS Nano. 2016 Apr 26;10(4):4873-81. doi: 10.1021/acsnano.6b02313. Epub 2016 Apr 15.

PMID:
27074626
8.

Retinal Remodeling: Concerns, Emerging Remedies and Future Prospects.

Krishnamoorthy V, Cherukuri P, Poria D, Goel M, Dagar S, Dhingra NK.

Front Cell Neurosci. 2016 Feb 17;10:38. doi: 10.3389/fncel.2016.00038. eCollection 2016.

9.

Replicate exome-sequencing in a multiple-generation family: improved interpretation of next-generation sequencing data.

Cherukuri PF, Maduro V, Fuentes-Fajardo KV, Lam K; NISC Comparative Sequencing Program, Adams DR, Tifft CJ, Mullikin JC, Gahl WA, Boerkoel CF.

BMC Genomics. 2015 Nov 25;16:998. doi: 10.1186/s12864-015-2107-y.

10.

p53 and ΔNp63α Coregulate the Transcriptional and Cellular Response to TGFβ and BMP Signals.

Balboni AL, Cherukuri P, Ung M, DeCastro AJ, Cheng C, DiRenzo J.

Mol Cancer Res. 2015 Apr;13(4):732-42. doi: 10.1158/1541-7786.MCR-14-0152-T. Epub 2015 Feb 19.

11.

ΔNP63α transcriptionally activates chemokine receptor 4 (CXCR4) expression to regulate breast cancer stem cell activity and chemotaxis.

DeCastro AJ, Cherukuri P, Balboni A, DiRenzo J.

Mol Cancer Ther. 2015 Jan;14(1):225-35. doi: 10.1158/1535-7163.MCT-14-0194. Epub 2014 Nov 5.

12.

Identification of candidate genes involved in coronary artery calcification by transcriptome sequencing of cell lines.

Sen SK, Barb JJ, Cherukuri PF, Accame DS, Elkahloun AG, Singh LN, Lee-Lin SQ; NISC Comparative Sequencing Program, Kolodgie FD, Cheng Q, Zhao X, Chen MY, Arai AE, Green ED, Mullikin JC, Munson PJ, Biesecker LG.

BMC Genomics. 2014 Mar 14;15:198. doi: 10.1186/1471-2164-15-198.

13.

Dlk1 promotes a fast motor neuron biophysical signature required for peak force execution.

Müller D, Cherukuri P, Henningfeld K, Poh CH, Wittler L, Grote P, Schlüter O, Schmidt J, Laborda J, Bauer SR, Brownstone RM, Marquardt T.

Science. 2014 Mar 14;343(6176):1264-6. doi: 10.1126/science.1246448.

14.

Gene-based sequencing identifies lipid-influencing variants with ethnicity-specific effects in African Americans.

Bentley AR, Chen G, Shriner D, Doumatey AP, Zhou J, Huang H, Mullikin JC, Blakesley RW, Hansen NF, Bouffard GG, Cherukuri PF, Maskeri B, Young AC, Adeyemo A, Rotimi CN.

PLoS Genet. 2014 Mar 6;10(3):e1004190. doi: 10.1371/journal.pgen.1004190. eCollection 2014 Mar.

15.

Loss of photoreceptors results in upregulation of synaptic proteins in bipolar cells and amacrine cells.

Dagar S, Nagar S, Goel M, Cherukuri P, Dhingra NK.

PLoS One. 2014 Mar 4;9(3):e90250. doi: 10.1371/journal.pone.0090250. eCollection 2014.

16.

Sequence diversity of Pan troglodytes subspecies and the impact of WFDC6 selective constraints in reproductive immunity.

Ferreira Z, Hurle B, Andrés AM, Kretzschmar WW, Mullikin JC, Cherukuri PF, Cruz P, Gonder MK, Stone AC, Tishkoff S, Swanson WJ; NISC Comparative Sequencing Program, Green ED, Clark AG, Seixas S.

Genome Biol Evol. 2013;5(12):2512-23. doi: 10.1093/gbe/evt198. Erratum in: Genome Biol Evol. 2014;6(2):406.

17.

Sequencing of candidate chromosome instability genes in endometrial cancers reveals somatic mutations in ESCO1, CHTF18, and MRE11A.

Price JC, Pollock LM, Rudd ML, Fogoros SK, Mohamed H, Hanigan CL, Le Gallo M; NIH Intramural Sequencing Center (NISC) Comparative Sequencing Program, Zhang S, Cruz P, Cherukuri PF, Hansen NF, McManus KJ, Godwin AK, Sgroi DC, Mullikin JC, Merino MJ, Hieter P, Bell DW.

PLoS One. 2013 Jun 3;8(6):e63313. doi: 10.1371/journal.pone.0063313. Print 2014.

18.

Novel SNP array analysis and exome sequencing detect a homozygous exon 7 deletion of MEGF10 causing early onset myopathy, areflexia, respiratory distress and dysphagia (EMARDD).

Pierson TM, Markello T, Accardi J, Wolfe L, Adams D, Sincan M, Tarazi NM, Fajardo KF, Cherukuri PF, Bajraktari I, Meilleur KG, Donkervoort S, Jain M, Hu Y, Lehky TJ, Cruz P, Mullikin JC, Bonnemann C, Gahl WA, Boerkoel CF, Tifft CJ.

Neuromuscul Disord. 2013 Jun;23(6):483-8. doi: 10.1016/j.nmd.2013.01.013. Epub 2013 Mar 1.

19.

MiR203 mediates subversion of stem cell properties during mammary epithelial differentiation via repression of ΔNP63α and promotes mesenchymal-to-epithelial transition.

DeCastro AJ, Dunphy KA, Hutchinson J, Balboni AL, Cherukuri P, Jerry DJ, DiRenzo J.

Cell Death Dis. 2013 Feb 28;4:e514. doi: 10.1038/cddis.2013.37.

20.

Reproduction and immunity-driven natural selection in the human WFDC locus.

Ferreira Z, Seixas S, Andrés AM, Kretzschmar WW, Mullikin JC, Cherukuri PF, Cruz P, Swanson WJ; NISC Comparative Sequencing Program, Clark AG, Green ED, Hurle B.

Mol Biol Evol. 2013 Apr;30(4):938-50. doi: 10.1093/molbev/mss329. Epub 2013 Jan 4.

21.

ΔNp63α-mediated activation of bone morphogenetic protein signaling governs stem cell activity and plasticity in normal and malignant mammary epithelial cells.

Balboni AL, Hutchinson JA, DeCastro AJ, Cherukuri P, Liby K, Sporn MB, Schwartz GN, Wells WA, Sempere LF, Yu PB, DiRenzo J.

Cancer Res. 2013 Jan 15;73(2):1020-30. doi: 10.1158/0008-5472.CAN-12-2862. Epub 2012 Dec 14.

22.

Phosphorylation of ΔNp63α via a novel TGFβ/ALK5 signaling mechanism mediates the anti-clonogenic effects of TGFβ.

Cherukuri P, DeCastro AJ, Balboni AL, Downey SL, Liu JY, Hutchinson JA, DiRenzo J.

PLoS One. 2012;7(11):e50066. doi: 10.1371/journal.pone.0050066. Epub 2012 Nov 16.

23.

Unanticipated reversal of polarity in primary human mammospheres cultured in ultra-low attachment plates.

Dorosko SM, Cherukuri P, Direnzo J.

J Pharm Sci. 2012 Dec;101(12):4666-8. doi: 10.1002/jps.23314. Epub 2012 Sep 10. No abstract available.

24.

Circadian changes in long noncoding RNAs in the pineal gland.

Coon SL, Munson PJ, Cherukuri PF, Sugden D, Rath MF, Møller M, Clokie SJ, Fu C, Olanich ME, Rangel Z, Werner T; NISC Comparative Sequencing Program, Mullikin JC, Klein DC.

Proc Natl Acad Sci U S A. 2012 Aug 14;109(33):13319-24. doi: 10.1073/pnas.1207748109. Epub 2012 Aug 3.

25.

Exome sequencing as a diagnostic tool in a case of undiagnosed juvenile-onset GM1-gangliosidosis.

Pierson TM, Adams DA, Markello T, Golas G, Yang S, Sincan M, Simeonov DR, Fuentes Fajardo K, Hansen NF, Cherukuri PF, Cruz P, Teer JK, Mullikin JC; NISC Comparative Sequencing Program, Boerkoel CF, Gahl WA, Tifft CJ.

Neurology. 2012 Jul 10;79(2):123-6. doi: 10.1212/WNL.0b013e31825f047a. Epub 2012 Jun 6.

26.

Incidental medical information in whole-exome sequencing.

Solomon BD, Hadley DW, Pineda-Alvarez DE; NISC Comparative Sequencing Program, Kamat A, Teer JK, Cherukuri PF, Hansen NF, Cruz P, Young AC, Berkman BE, Chandrasekharappa SC, Mullikin JC.

Pediatrics. 2012 Jun;129(6):e1605-11. doi: 10.1542/peds.2011-0080. Epub 2012 May 14.

27.

Single nanoparticle spectroscopy for real-time in vivo quantitative analysis of transport and toxicity of single nanoparticles in single embryos.

Lee KJ, Nallathamby PD, Browning LM, Desai T, Cherukuri PK, Xu XH.

Analyst. 2012 Jul 7;137(13):2973-86. doi: 10.1039/c2an35293a. Epub 2012 May 4.

PMID:
22563577
28.

In vivo quantitative study of sized-dependent transport and toxicity of single silver nanoparticles using zebrafish embryos.

Lee KJ, Browning LM, Nallathamby PD, Desai T, Cherukuri PK, Xu XH.

Chem Res Toxicol. 2012 May 21;25(5):1029-46. doi: 10.1021/tx300021u. Epub 2012 Apr 24.

29.

An analysis of exome sequencing for diagnostic testing of the genes associated with muscle disease and spastic paraplegia.

Dias C, Sincan M, Cherukuri PF, Rupps R, Huang Y, Briemberg H, Selby K, Mullikin JC, Markello TC, Adams DR, Gahl WA, Boerkoel CF.

Hum Mutat. 2012 Apr;33(4):614-26. doi: 10.1002/humu.22032. Epub 2012 Feb 28.

30.

Exome sequencing and SNP analysis detect novel compound heterozygosity in fatty acid hydroxylase-associated neurodegeneration.

Pierson TM, Simeonov DR, Sincan M, Adams DA, Markello T, Golas G, Fuentes-Fajardo K, Hansen NF, Cherukuri PF, Cruz P, Mullikin JC, Blackstone C, Tifft C, Boerkoel CF, Gahl WA; NISC Comparative Sequencing Program.

Eur J Hum Genet. 2012 Apr;20(4):476-9. doi: 10.1038/ejhg.2011.222. Epub 2011 Dec 7.

31.

Whole-exome sequencing identifies homozygous AFG3L2 mutations in a spastic ataxia-neuropathy syndrome linked to mitochondrial m-AAA proteases.

Pierson TM, Adams D, Bonn F, Martinelli P, Cherukuri PF, Teer JK, Hansen NF, Cruz P, Mullikin For The Nisc Comparative Sequencing Program JC, Blakesley RW, Golas G, Kwan J, Sandler A, Fuentes Fajardo K, Markello T, Tifft C, Blackstone C, Rugarli EI, Langer T, Gahl WA, Toro C.

PLoS Genet. 2011 Oct;7(10):e1002325. doi: 10.1371/journal.pgen.1002325. Epub 2011 Oct 13.

32.

Exon capture analysis of G protein-coupled receptors identifies activating mutations in GRM3 in melanoma.

Prickett TD, Wei X, Cardenas-Navia I, Teer JK, Lin JC, Walia V, Gartner J, Jiang J, Cherukuri PF, Molinolo A, Davies MA, Gershenwald JE, Stemke-Hale K, Rosenberg SA, Margulies EH, Samuels Y.

Nat Genet. 2011 Sep 25;43(11):1119-26. doi: 10.1038/ng.950.

33.

ΔNp63α promotes cellular quiescence via induction and activation of Notch3.

Kent S, Hutchinson J, Balboni A, Decastro A, Cherukuri P, Direnzo J.

Cell Cycle. 2011 Sep 15;10(18):3111-8. Epub 2011 Sep 15.

34.

Predisposition to cancer caused by genetic and functional defects of mammalian Atad5.

Bell DW, Sikdar N, Lee KY, Price JC, Chatterjee R, Park HD, Fox J, Ishiai M, Rudd ML, Pollock LM, Fogoros SK, Mohamed H, Hanigan CL; NISC Comparative Sequencing Program, Zhang S, Cruz P, Renaud G, Hansen NF, Cherukuri PF, Borate B, McManus KJ, Stoepel J, Sipahimalani P, Godwin AK, Sgroi DC, Merino MJ, Elliot G, Elkahloun A, Vinson C, Takata M, Mullikin JC, Wolfsberg TG, Hieter P, Lim DS, Myung K.

PLoS Genet. 2011 Aug;7(8):e1002245. doi: 10.1371/journal.pgen.1002245. Epub 2011 Aug 25.

35.

Genome-wide ChIP-Seq reveals a dramatic shift in the binding of the transcription factor erythroid Kruppel-like factor during erythrocyte differentiation.

Pilon AM, Ajay SS, Kumar SA, Steiner LA, Cherukuri PF, Wincovitch S, Anderson SM; NISC Comparative Sequencing Center, Mullikin JC, Gallagher PG, Hardison RC, Margulies EH, Bodine DM.

Blood. 2011 Oct 27;118(17):e139-48. doi: 10.1182/blood-2011-05-355107. Epub 2011 Sep 6.

36.

Personalized genomic medicine: lessons from the exome.

Solomon BD, Pineda-Alvarez DE, Hadley DW, NISC Comparative Sequencing Program, Teer JK, Cherukuri PF, Hansen NF, Cruz P, Young AC, Blakesley RW, Lanpher B, Mayfield Gibson S, Sincan M, Chandrasekharappa SC, Mullikin JC.

Mol Genet Metab. 2011 Sep-Oct;104(1-2):189-91. doi: 10.1016/j.ymgme.2011.06.022. Epub 2011 Jul 5.

37.

TTC21B contributes both causal and modifying alleles across the ciliopathy spectrum.

Davis EE, Zhang Q, Liu Q, Diplas BH, Davey LM, Hartley J, Stoetzel C, Szymanska K, Ramaswami G, Logan CV, Muzny DM, Young AC, Wheeler DA, Cruz P, Morgan M, Lewis LR, Cherukuri P, Maskeri B, Hansen NF, Mullikin JC, Blakesley RW, Bouffard GG; NISC Comparative Sequencing Program, Gyapay G, Rieger S, Tönshoff B, Kern I, Soliman NA, Neuhaus TJ, Swoboda KJ, Kayserili H, Gallagher TE, Lewis RA, Bergmann C, Otto EA, Saunier S, Scambler PJ, Beales PL, Gleeson JG, Maher ER, Attié-Bitach T, Dollfus H, Johnson CA, Green ED, Gibbs RA, Hildebrandt F, Pierce EA, Katsanis N.

Nat Genet. 2011 Mar;43(3):189-96. doi: 10.1038/ng.756. Epub 2011 Jan 23.

38.

Compound heterozygosity for loss-of-function lysyl-tRNA synthetase mutations in a patient with peripheral neuropathy.

McLaughlin HM, Sakaguchi R, Liu C, Igarashi T, Pehlivan D, Chu K, Iyer R, Cruz P, Cherukuri PF, Hansen NF, Mullikin JC; NISC Comparative Sequencing Program, Biesecker LG, Wilson TE, Ionasescu V, Nicholson G, Searby C, Talbot K, Vance JM, Züchner S, Szigeti K, Lupski JR, Hou YM, Green ED, Antonellis A.

Am J Hum Genet. 2010 Oct 8;87(4):560-6. doi: 10.1016/j.ajhg.2010.09.008.

39.

Gray platelet syndrome: natural history of a large patient cohort and locus assignment to chromosome 3p.

Gunay-Aygun M, Zivony-Elboum Y, Gumruk F, Geiger D, Cetin M, Khayat M, Kleta R, Kfir N, Anikster Y, Chezar J, Arcos-Burgos M, Shalata A, Stanescu H, Manaster J, Arat M, Edwards H, Freiberg AS, Hart PS, Riney LC, Patzel K, Tanpaiboon P, Markello T, Huizing M, Maric I, Horne M, Kehrel BE, Jurk K, Hansen NF, Cherukuri PF, Jones M, Cruz P, Mullikin JC, Nurden A, White JG, Gahl WA, Falik-Zaccai T.

Blood. 2010 Dec 2;116(23):4990-5001. doi: 10.1182/blood-2010-05-286534. Epub 2010 Aug 13.

40.

Massively parallel sequencing of exons on the X chromosome identifies RBM10 as the gene that causes a syndromic form of cleft palate.

Johnston JJ, Teer JK, Cherukuri PF, Hansen NF, Loftus SK; NIH Intramural Sequencing Center (NISC), Chong K, Mullikin JC, Biesecker LG.

Am J Hum Genet. 2010 May 14;86(5):743-8. doi: 10.1016/j.ajhg.2010.04.007. Epub 2010 May 6.

41.

Use of nanoparticles for targeted, noninvasive thermal destruction of malignant cells.

Cherukuri P, Curley SA.

Methods Mol Biol. 2010;624:359-73. doi: 10.1007/978-1-60761-609-2_24.

PMID:
20217608
42.

In Vivo Therapeutic Silencing of Hypoxia-Inducible Factor 1 Alpha (HIF-1α) Using Single-Walled Carbon Nanotubes Noncovalently Coated with siRNA.

Bartholomeusz G, Cherukuri P, Kingston J, Cognet L, Lemos R, Leeuw TK, Gumbiner-Russo L, Weisman RB, Powis G.

Nano Res. 2009 Apr 17;2(4):279-291.

43.

Replacing Mn(2+) with Co(2+) in human arginase i enhances cytotoxicity toward l-arginine auxotrophic cancer cell lines.

Stone EM, Glazer ES, Chantranupong L, Cherukuri P, Breece RM, Tierney DL, Curley SA, Iverson BL, Georgiou G.

ACS Chem Biol. 2010 Mar 19;5(3):333-42. doi: 10.1021/cb900267j. Erratum in: ACS Chem Biol. 2010 Aug 20;5(8):797.

44.

Targeted hyperthermia using metal nanoparticles.

Cherukuri P, Glazer ES, Curley SA.

Adv Drug Deliv Rev. 2010 Mar 8;62(3):339-45. doi: 10.1016/j.addr.2009.11.006. Epub 2009 Nov 10. Review.

45.

The ClinSeq Project: piloting large-scale genome sequencing for research in genomic medicine.

Biesecker LG, Mullikin JC, Facio FM, Turner C, Cherukuri PF, Blakesley RW, Bouffard GG, Chines PS, Cruz P, Hansen NF, Teer JK, Maskeri B, Young AC; NISC Comparative Sequencing Program, Manolio TA, Wilson AF, Finkel T, Hwang P, Arai A, Remaley AT, Sachdev V, Shamburek R, Cannon RO, Green ED.

Genome Res. 2009 Sep;19(9):1665-74. doi: 10.1101/gr.092841.109. Epub 2009 Jul 14.

46.

Parallel and orthogonal E-field alignment of single-walled carbon nanotubes by ac dielectrophoresis.

Padmaraj D, Zagozdzon-Wosik W, Xie LM, Hadjiev VG, Cherukuri P, Wosik J.

Nanotechnology. 2009 Jan 21;20(3):035201. doi: 10.1088/0957-4484/20/3/035201. Epub 2008 Dec 16.

PMID:
19417287
47.

Early remodeling in an inducible animal model of retinal degeneration.

Nagar S, Krishnamoorthy V, Cherukuri P, Jain V, Dhingra NK.

Neuroscience. 2009 May 5;160(2):517-29. doi: 10.1016/j.neuroscience.2009.02.056. Epub 2009 Mar 6.

PMID:
19272416
48.

Noninvasive radiofrequency field-induced hyperthermic cytotoxicity in human cancer cells using cetuximab-targeted gold nanoparticles.

Curley SA, Cherukuri P, Briggs K, Patra CR, Upton M, Dolson E, Mukherjee P.

J Exp Ther Oncol. 2008;7(4):313-26.

PMID:
19227011
49.

Reciprocal intraepithelial interactions between TP63 and hedgehog signaling regulate quiescence and activation of progenitor elaboration by mammary stem cells.

Li N, Singh S, Cherukuri P, Li H, Yuan Z, Ellisen LW, Wang B, Robbins D, DiRenzo J.

Stem Cells. 2008 May;26(5):1253-64. doi: 10.1634/stemcells.2007-0691. Epub 2008 Feb 21.

50.

Intravitreal injection of fluorochrome-conjugated peanut agglutinin results in specific and reversible labeling of mammalian cones in vivo.

Krishnamoorthy V, Jain V, Cherukuri P, Baloni S, Dhingra NK.

Invest Ophthalmol Vis Sci. 2008 Jun;49(6):2643-50. doi: 10.1167/iovs.07-1471. Epub 2008 Feb 15.

PMID:
18281609

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