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Items: 1 to 50 of 917

1.

Significant chemical fluxes from natural terrestrial groundwater rival anthropogenic and fluvial input in a large-river deltaic estuary.

Luo X, Jiao JJ, Moore WS, Cherry JA, Wang Y, Liu K.

Water Res. 2018 Jul 31;144:603-615. doi: 10.1016/j.watres.2018.07.004. [Epub ahead of print]

PMID:
30096687
2.

Lewy Body Pathology and Chronic Traumatic Encephalopathy Associated With Contact Sports.

Adams JW, Alvarez VE, Mez J, Huber BR, Tripodis Y, Xia W, Meng G, Kubilus CA, Cormier K, Kiernan PT, Daneshvar DH, Chua AS, Svirsky S, Nicks R, Abdolmohammadi B, Evers L, Solomon TM, Cherry JD, Aytan N, Mahar I, Devine S, Auerbach S, Alosco ML, Nowinski CJ, Kowall NW, Goldstein LE, Dwyer B, Katz DI, Cantu RC, Stern RA, Au R, McKee AC, Stein TD.

J Neuropathol Exp Neurol. 2018 Sep 1;77(9):757-768. doi: 10.1093/jnen/nly065.

3.

Improving estimates of groundwater velocity in a fractured rock borehole using hydraulic and tracer dilution methods.

Maldaner CH, Quinn PM, Cherry JA, Parker BL.

J Contam Hydrol. 2018 Jul;214:75-86. doi: 10.1016/j.jconhyd.2018.05.003. Epub 2018 May 17.

PMID:
29907430
4.

High resolution spatial and temporal evolution of dissolved gases in groundwater during a controlled natural gas release experiment.

Cahill AG, Parker BL, Mayer B, Mayer KU, Cherry JA.

Sci Total Environ. 2018 May 1;622-623:1178-1192. doi: 10.1016/j.scitotenv.2017.12.049. Epub 2017 Dec 13.

PMID:
29890586
5.

Clinical Characteristics of Measles in Previously Vaccinated and Unvaccinated Patients in California.

Cherry JD, Zahn M.

Clin Infect Dis. 2018 Jun 7. doi: 10.1093/cid/ciy286. [Epub ahead of print]

PMID:
29878209
6.

Cognitive Performance as Predictor and Outcome of Adolescent Bariatric Surgery: A Nonrandomized Pilot Study.

Mackey ER, Jacobs M, Nadler EP, Olson A, Pearce A, Cherry JBC, Magge SN, Mietus-Snyer M, Vaidya C.

J Pediatr Psychol. 2018 Sep 1;43(8):916-927. doi: 10.1093/jpepsy/jsy028.

PMID:
29788390
7.

Prevention of data duplication for high throughput sequencing repositories.

Gabdank I, Chan ET, Davidson JM, Hilton JA, Davis CA, Baymuradov UK, Narayanan A, Onate KC, Graham K, Miyasato SR, Dreszer TR, Strattan JS, Jolanki O, Tanaka FY, Hitz BC, Sloan CA, Cherry JM.

Database (Oxford). 2018 Jan 1;2018. doi: 10.1093/database/bay008.

8.

Updated regulation curation model at the Saccharomyces Genome Database.

Engel SR, Skrzypek MS, Hellerstedt ST, Wong ED, Nash RS, Weng S, Binkley G, Sheppard TK, Karra K, Cherry JM.

Database (Oxford). 2018 Jan 1;2018. doi: 10.1093/database/bay007.

9.

HEx: A heterologous expression platform for the discovery of fungal natural products.

Harvey CJB, Tang M, Schlecht U, Horecka J, Fischer CR, Lin HC, Li J, Naughton B, Cherry J, Miranda M, Li YF, Chu AM, Hennessy JR, Vandova GA, Inglis D, Aiyar RS, Steinmetz LM, Davis RW, Medema MH, Sattely E, Khosla C, St Onge RP, Tang Y, Hillenmeyer ME.

Sci Adv. 2018 Apr 11;4(4):eaar5459. doi: 10.1126/sciadv.aar5459. eCollection 2018 Apr.

10.

DFN-M field characterization of sandstone for a process-based site conceptual model and numerical simulations of TCE transport with degradation.

Pierce AA, Chapman SW, Zimmerman LK, Hurley JC, Aravena R, Cherry JA, Parker BL.

J Contam Hydrol. 2018 May;212:96-114. doi: 10.1016/j.jconhyd.2018.03.001. Epub 2018 Mar 3.

PMID:
29530334
11.

Gonadal hormones, but not sex, affect the acquisition and maintenance of a Go/No-Go odor discrimination task in mice.

Kunkhyen T, Perez E, Bass M, Coyne A, Baum MJ, Cherry JA.

Horm Behav. 2018 Apr;100:12-19. doi: 10.1016/j.yhbeh.2018.02.009. Epub 2018 Mar 7.

PMID:
29481807
12.

Predictors of measles vaccination coverage among children 6-59 months of age in the Democratic Republic of the Congo.

Ashbaugh HR, Hoff NA, Doshi RH, Alfonso VH, Gadoth A, Mukadi P, Okitolonda-Wemakoy E, Muyembe-Tamfum JJ, Gerber SK, Cherry JD, Rimoin AW.

Vaccine. 2018 Jan 25;36(4):587-593. doi: 10.1016/j.vaccine.2017.11.049. Epub 2017 Dec 14.

13.

Effect of Ovarian Hormones and Mating Experience on the Preference of Female Mice to Investigate Male Urinary Pheromones.

McCarthy EA, Naik AS, Coyne AF, Cherry JA, Baum MJ.

Chem Senses. 2018 Feb 2;43(2):97-104. doi: 10.1093/chemse/bjx073.

PMID:
29211837
14.

Characterization of Detergent Insoluble Proteome in Chronic Traumatic Encephalopathy.

Cherry JD, Zeineddin A, Dammer EB, Webster JA, Duong D, Seyfried NT, Levey AI, Alvarez VE, Huber BR, Stein TD, Kiernan PT, McKee AC, Lah JJ, Hales CM.

J Neuropathol Exp Neurol. 2018 Jan 1;77(1):40-49. doi: 10.1093/jnen/nlx100.

PMID:
29145658
15.

Saccharomyces genome database informs human biology.

Skrzypek MS, Nash RS, Wong ED, MacPherson KA, Hellerstedt ST, Engel SR, Karra K, Weng S, Sheppard TK, Binkley G, Simison M, Miyasato SR, Cherry JM.

Nucleic Acids Res. 2018 Jan 4;46(D1):D736-D742. doi: 10.1093/nar/gkx1112.

16.

The Encyclopedia of DNA elements (ENCODE): data portal update.

Davis CA, Hitz BC, Sloan CA, Chan ET, Davidson JM, Gabdank I, Hilton JA, Jain K, Baymuradov UK, Narayanan AK, Onate KC, Graham K, Miyasato SR, Dreszer TR, Strattan JS, Jolanki O, Tanaka FY, Cherry JM.

Nucleic Acids Res. 2018 Jan 4;46(D1):D794-D801. doi: 10.1093/nar/gkx1081.

17.

Optimization of a series of heterocycles as survival motor neuron gene transcription enhancers.

Choi S, Calder AN, Miller EH, Anderson KP, Fiejtek DK, Rietz A, Li H, Cherry JJ, Quist KM, Xing X, Glicksman MA, Cuny GD, Lorson CL, Androphy EA, Hodgetts KJ.

Bioorg Med Chem Lett. 2017 Dec 1;27(23):5144-5148. doi: 10.1016/j.bmcl.2017.10.066. Epub 2017 Oct 26.

PMID:
29103974
18.

Stuttering as a Symptom of Concussion: Confirmation of Association Using Nontraditional Information Sources.

Cherry JC, Gordon KE.

Pediatr Emerg Care. 2017 Nov;33(11):e137-e139. doi: 10.1097/PEC.0000000000001326. Review.

PMID:
29095783
19.

Effect of Adolescent Bariatric Surgery on the Brain and Cognition: A Pilot Study.

Pearce AL, Mackey E, Cherry JBC, Olson A, You X, Magge SN, Mietus-Snyder M, Nadler EP, Vaidya CJ.

Obesity (Silver Spring). 2017 Nov;25(11):1852-1860. doi: 10.1002/oby.22013.

PMID:
29086502
20.

Development of a Flexible-Monomer Two-Body Carbon Dioxide Potential and Its Application to Clusters up to (CO2 )13.

Sode O, Cherry JN.

J Comput Chem. 2017 Dec 15;38(32):2763-2774. doi: 10.1002/jcc.25053. Epub 2017 Oct 24.

PMID:
29067701
21.

Effectiveness of Intramuscular Immunoglobulin in Unvaccinated Family Members After Household Measles Exposure.

Salzman MB, Cherry JD.

Clin Infect Dis. 2017 Nov 13;65(11):1955-1956. doi: 10.1093/cid/cix642. No abstract available.

PMID:
29020233
22.

CCL11 is increased in the CNS in chronic traumatic encephalopathy but not in Alzheimer's disease.

Cherry JD, Stein TD, Tripodis Y, Alvarez VE, Huber BR, Au R, Kiernan PT, Daneshvar DH, Mez J, Solomon TM, Alosco ML, McKee AC.

PLoS One. 2017 Sep 26;12(9):e0185541. doi: 10.1371/journal.pone.0185541. eCollection 2017.

23.

In vitro and in vivo effects of 2,4 diaminoquinazoline inhibitors of the decapping scavenger enzyme DcpS: Context-specific modulation of SMN transcript levels.

Cherry JJ, DiDonato CJ, Androphy EJ, Calo A, Potter K, Custer SK, Du S, Foley TL, Gopalsamy A, Reedich EJ, Gordo SM, Gordon W, Hosea N, Jones LH, Krizay DK, LaRosa G, Li H, Mathur S, Menard CA, Patel P, Ramos-Zayas R, Rietz A, Rong H, Zhang B, Tones MA.

PLoS One. 2017 Sep 25;12(9):e0185079. doi: 10.1371/journal.pone.0185079. eCollection 2017.

24.

Assessing coastal wetland vulnerability to sea-level rise along the northern Gulf of Mexico coast: Gaps and opportunities for developing a coordinated regional sampling network.

Osland MJ, Griffith KT, Larriviere JC, Feher LC, Cahoon DR, Enwright NM, Oster DA, Tirpak JM, Woodrey MS, Collini RC, Baustian JJ, Breithaupt JL, Cherry JA, Conrad JR, Cormier N, Coronado-Molina CA, Donoghue JF, Graham SA, Harper JW, Hester MW, Howard RJ, Krauss KW, Kroes DE, Lane RR, McKee KL, Mendelssohn IA, Middleton BA, Moon JA, Piazza SC, Rankin NM, Sklar FH, Steyer GD, Swanson KM, Swarzenski CM, Vervaeke WC, Willis JM, Wilson KV.

PLoS One. 2017 Sep 13;12(9):e0183431. doi: 10.1371/journal.pone.0183431. eCollection 2017.

25.

Substrate-triggered position switching of TatA and TatB during Tat transport in Escherichia coli.

Habersetzer J, Moore K, Cherry J, Buchanan G, Stansfeld PJ, Palmer T.

Open Biol. 2017 Aug;7(8). pii: 170091. doi: 10.1098/rsob.170091.

26.

Novel near-diploid ovarian cancer cell line derived from a highly aneuploid metastatic ovarian tumor.

Rozenblum E, Sotelo-Silveira JR, Kim GY, Zhu JY, Lau CC, McNeil N, Korolevich S, Liao H, Cherry JM, Munroe DJ, Ried T, Meltzer PS, Kuehl WM, Roschke AV.

PLoS One. 2017 Aug 7;12(8):e0182610. doi: 10.1371/journal.pone.0182610. eCollection 2017.

27.

An Observational Study of Severe Pertussis in 100 Infants ≤120 Days of Age.

Cherry JD, Wendorf K, Bregman B, Lehman D, Nieves D, Bradley JS, Mason WH, Sande-Lopez L, Lopez M, Federman M, Chen T, Blumberg D, Johnston S, Schwenk HT, Weintrub P, Quinn KK, Winter K, Harriman K.

Pediatr Infect Dis J. 2018 Mar;37(3):202-205. doi: 10.1097/INF.0000000000001710.

PMID:
28737623
28.

DREADD-induced silencing of the medial amygdala reduces the preference for male pheromones and the expression of lordosis in estrous female mice.

McCarthy EA, Maqsudlu A, Bass M, Georghiou S, Cherry JA, Baum MJ.

Eur J Neurosci. 2017 Aug;46(4):2035-2046. doi: 10.1111/ejn.13636. Epub 2017 Aug 1.

29.

Treatment of Pertussis-2017.

Cherry JD.

J Pediatric Infect Dis Soc. 2018 Aug 17;7(3):e123-e125. doi: 10.1093/jpids/pix044. No abstract available.

PMID:
28637326
30.

Recent advances in synthetic biology for engineering isoprenoid production in yeast.

Vickers CE, Williams TC, Peng B, Cherry J.

Curr Opin Chem Biol. 2017 Oct;40:47-56. doi: 10.1016/j.cbpa.2017.05.017. Epub 2017 Jun 14. Review.

PMID:
28623722
31.

Evaluating the Clinical Validity of Gene-Disease Associations: An Evidence-Based Framework Developed by the Clinical Genome Resource.

Strande NT, Riggs ER, Buchanan AH, Ceyhan-Birsoy O, DiStefano M, Dwight SS, Goldstein J, Ghosh R, Seifert BA, Sneddon TP, Wright MW, Milko LV, Cherry JM, Giovanni MA, Murray MF, O'Daniel JM, Ramos EM, Santani AB, Scott AF, Plon SE, Rehm HL, Martin CL, Berg JS.

Am J Hum Genet. 2017 Jun 1;100(6):895-906. doi: 10.1016/j.ajhg.2017.04.015. Epub 2017 May 25.

32.

Maternal Zika Virus Disease Severity, Virus Load, Prior Dengue Antibodies, and Their Relationship to Birth Outcomes.

Halai UA, Nielsen-Saines K, Moreira ML, de Sequeira PC, Junior JPP, de Araujo Zin A, Cherry J, Gabaglia CR, Gaw SL, Adachi K, Tsui I, Pilotto JH, Nogueira RR, de Filippis AMB, Brasil P.

Clin Infect Dis. 2017 Sep 15;65(6):877-883. doi: 10.1093/cid/cix472.

33.

Discovery of a Small Molecule Probe That Post-Translationally Stabilizes the Survival Motor Neuron Protein for the Treatment of Spinal Muscular Atrophy.

Rietz A, Li H, Quist KM, Cherry JJ, Lorson CL, Burnett BG, Kern NL, Calder AN, Fritsche M, Lusic H, Boaler PJ, Choi S, Xing X, Glicksman MA, Cuny GD, Androphy EJ, Hodgetts KJ.

J Med Chem. 2017 Jun 8;60(11):4594-4610. doi: 10.1021/acs.jmedchem.6b01885. Epub 2017 May 19.

34.

SnoVault and encodeD: A novel object-based storage system and applications to ENCODE metadata.

Hitz BC, Rowe LD, Podduturi NR, Glick DI, Baymuradov UK, Malladi VS, Chan ET, Davidson JM, Gabdank I, Narayana AK, Onate KC, Hilton J, Ho MC, Lee BT, Miyasato SR, Dreszer TR, Sloan CA, Strattan JS, Tanaka FY, Hong EL, Cherry JM.

PLoS One. 2017 Apr 12;12(4):e0175310. doi: 10.1371/journal.pone.0175310. eCollection 2017.

35.

Subacute Sclerosing Panencephalitis: The Devastating Measles Complication That Might Be More Common Than Previously Estimated.

Wendorf KA, Winter K, Zipprich J, Schechter R, Hacker JK, Preas C, Cherry JD, Glaser C, Harriman K.

Clin Infect Dis. 2017 Jul 15;65(2):226-232. doi: 10.1093/cid/cix302.

PMID:
28387784
36.

Optogenetic Activation of Accessory Olfactory Bulb Input to the Forebrain Differentially Modulates Investigation of Opposite versus Same-Sex Urinary Chemosignals and Stimulates Mating in Male Mice.

Kunkhyen T, McCarthy EA, Korzan WJ, Doctor D, Han X, Baum MJ, Cherry JA.

eNeuro. 2017 Mar 23;4(2). pii: ENEURO.0010-17.2017. doi: 10.1523/ENEURO.0010-17.2017. eCollection 2017 Mar-Apr.

37.

Curated protein information in the Saccharomyces genome database.

Hellerstedt ST, Nash RS, Weng S, Paskov KM, Wong ED, Karra K, Engel SR, Cherry JM.

Database (Oxford). 2017 Jan 1;2017(1). doi: 10.1093/database/bax011.

38.

Outreach and online training services at the Saccharomyces Genome Database.

MacPherson KA, Starr B, Wong ED, Dalusag KS, Hellerstedt ST, Lang OW, Nash RS, Skrzypek MS, Engel SR, Cherry JM.

Database (Oxford). 2017 Jan 1;2017(1). doi: 10.1093/database/bax002.

39.

Design of Potent mRNA Decapping Scavenger Enzyme (DcpS) Inhibitors with Improved Physicochemical Properties To Investigate the Mechanism of Therapeutic Benefit in Spinal Muscular Atrophy (SMA).

Gopalsamy A, Narayanan A, Liu S, Parikh MD, Kyne RE Jr, Fadeyi O, Tones MA, Cherry JJ, Nabhan JF, LaRosa G, Petersen DN, Menard C, Foley TL, Noell S, Ren Y, Loria PM, Maglich-Goodwin J, Rong H, Jones LH.

J Med Chem. 2017 Apr 13;60(7):3094-3108. doi: 10.1021/acs.jmedchem.7b00124. Epub 2017 Mar 16.

PMID:
28257199
40.

A practical exact maximum compatibility algorithm for reconstruction of recent evolutionary history.

Cherry JL.

BMC Bioinformatics. 2017 Feb 23;18(1):127. doi: 10.1186/s12859-017-1520-4.

41.

Active Interaction Mapping Reveals the Hierarchical Organization of Autophagy.

Kramer MH, Farré JC, Mitra K, Yu MK, Ono K, Demchak B, Licon K, Flagg M, Balakrishnan R, Cherry JM, Subramani S, Ideker T.

Mol Cell. 2017 Feb 16;65(4):761-774.e5. doi: 10.1016/j.molcel.2016.12.024. Epub 2017 Jan 26.

42.

Ecosystem responses to climate change at a Low Arctic and a High Arctic long-term research site.

Hobbie JE, Shaver GR, Rastetter EB, Cherry JE, Goetz SJ, Guay KC, Gould WA, Kling GW.

Ambio. 2017 Feb;46(Suppl 1):160-173. doi: 10.1007/s13280-016-0870-x.

43.

A comparison of the effects of male pheromone priming and optogenetic inhibition of accessory olfactory bulb forebrain inputs on the sexual behavior of estrous female mice.

McCarthy EA, Kunkhyen T, Korzan WJ, Naik A, Maqsudlu A, Cherry JA, Baum MJ.

Horm Behav. 2017 Mar;89:104-112. doi: 10.1016/j.yhbeh.2016.12.011. Epub 2017 Jan 5.

44.

ML372 blocks SMN ubiquitination and improves spinal muscular atrophy pathology in mice.

Abera MB, Xiao J, Nofziger J, Titus S, Southall N, Zheng W, Moritz KE, Ferrer M, Cherry JJ, Androphy EJ, Wang A, Xu X, Austin C, Fischbeck KH, Marugan JJ, Burnett BG.

JCI Insight. 2016 Nov 17;1(19):e88427.

45.

Pertussis in Young Infants Throughout the World.

Cherry JD.

Clin Infect Dis. 2016 Dec 1;63(suppl 4):S119-S122.

46.

Effectiveness of Prenatal Tetanus, Diphtheria, and Acellular Pertussis Vaccination on Pertussis Severity in Infants.

Winter K, Cherry JD, Harriman K.

Clin Infect Dis. 2017 Jan 1;64(1):9-14. Epub 2016 Sep 13.

PMID:
27624956
47.

Microglial neuroinflammation contributes to tau accumulation in chronic traumatic encephalopathy.

Cherry JD, Tripodis Y, Alvarez VE, Huber B, Kiernan PT, Daneshvar DH, Mez J, Montenigro PH, Solomon TM, Alosco ML, Stern RA, McKee AC, Stein TD.

Acta Neuropathol Commun. 2016 Oct 28;4(1):112.

48.

The Influence of Televised Food Commercials on Children's Food Choices: Evidence from Ventromedial Prefrontal Cortex Activations.

Bruce AS, Pruitt SW, Ha OR, Cherry JBC, Smith TR, Bruce JM, Lim SL.

J Pediatr. 2016 Oct;177:27-32.e1. doi: 10.1016/j.jpeds.2016.06.067. Epub 2016 Aug 12.

49.

Clinical Characteristics and Factors Associated With Measles Transmission in California.

Zipprich J, Zahn M, Harriman K, Cherry JD.

Open Forum Infect Dis. 2015 Dec 9;2(Suppl 1). pii: LB-4. doi: 10.1093/ofid/ofv130.04. eCollection 2015 Dec. No abstract available.

50.

Healthy eating decisions require efficient dietary self-control in children: A mouse-tracking food decision study.

Ha OR, Bruce AS, Pruitt SW, Cherry JB, Smith TR, Burkart D, Bruce JM, Lim SL.

Appetite. 2016 Oct 1;105:575-81. doi: 10.1016/j.appet.2016.06.027. Epub 2016 Jun 25.

PMID:
27349708

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