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Items: 41

1.

Form III RubisCO-mediated transaldolase variant of the Calvin cycle in a chemolithoautotrophic bacterium.

Frolov EN, Kublanov IV, Toshchakov SV, Lunev EA, Pimenov NV, Bonch-Osmolovskaya EA, Lebedinsky AV, Chernyh NA.

Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18638-18646. doi: 10.1073/pnas.1904225116. Epub 2019 Aug 26.

PMID:
31451656
2.

Diversity of "Ca. Micrarchaeota" in Two Distinct Types of Acidic Environments and Their Associations with Thermoplasmatales.

Golyshina OV, Bargiela R, Toshchakov SV, Chernyh NA, Ramayah S, Korzhenkov AA, Kublanov IV, Golyshin PN.

Genes (Basel). 2019 Jun 15;10(6). pii: E461. doi: 10.3390/genes10060461.

3.

Desulfothermobacter acidiphilus gen. nov., sp. nov., a thermoacidophilic sulfate-reducing bacterium isolated from a terrestrial hot spring.

Frolov EN, Zayulina KS, Kopitsyn DS, Kublanov IV, Bonch-Osmolovskaya EA, Chernyh NA.

Int J Syst Evol Microbiol. 2018 Mar;68(3):871-875. doi: 10.1099/ijsem.0.002599. Epub 2018 Jan 25.

PMID:
29458537
4.

Genomic Analysis of Caldithrix abyssi, the Thermophilic Anaerobic Bacterium of the Novel Bacterial Phylum Calditrichaeota.

Kublanov IV, Sigalova OM, Gavrilov SN, Lebedinsky AV, Rinke C, Kovaleva O, Chernyh NA, Ivanova N, Daum C, Reddy TB, Klenk HP, Spring S, Göker M, Reva ON, Miroshnichenko ML, Kyrpides NC, Woyke T, Gelfand MS, Bonch-Osmolovskaya EA.

Front Microbiol. 2017 Feb 20;8:195. doi: 10.3389/fmicb.2017.00195. eCollection 2017.

5.

Respiratory Ammonification of Nitrate Coupled to Anaerobic Oxidation of Elemental Sulfur in Deep-Sea Autotrophic Thermophilic Bacteria.

Slobodkina GB, Mardanov AV, Ravin NV, Frolova AA, Chernyh NA, Bonch-Osmolovskaya EA, Slobodkin AI.

Front Microbiol. 2017 Jan 30;8:87. doi: 10.3389/fmicb.2017.00087. eCollection 2017.

6.

Stable and Variable Parts of Microbial Community in Siberian Deep Subsurface Thermal Aquifer System Revealed in a Long-Term Monitoring Study.

Frank YA, Kadnikov VV, Gavrilov SN, Banks D, Gerasimchuk AL, Podosokorskaya OA, Merkel AY, Chernyh NA, Mardanov AV, Ravin NV, Karnachuk OV, Bonch-Osmolovskaya EA.

Front Microbiol. 2016 Dec 27;7:2101. doi: 10.3389/fmicb.2016.02101. eCollection 2016.

7.

Thermodesulfobium acidiphilum sp. nov., a thermoacidophilic, sulfate-reducing, chemoautotrophic bacterium from a thermal site.

Frolov EN, Kublanov IV, Toshchakov SV, Samarov NI, Novikov AA, Lebedinsky AV, Bonch-Osmolovskaya EA, Chernyh NA.

Int J Syst Evol Microbiol. 2017 May;67(5):1482-1485. doi: 10.1099/ijsem.0.001745. Epub 2017 May 24.

PMID:
27995866
8.

Calorithrix insularis gen. nov., sp. nov., a novel representative of the phylum Calditrichaeota.

Kompantseva EI, Kublanov IV, Perevalova AA, Chernyh NA, Toshchakov SV, Litti YV, Antipov AN, Bonch-Osmolovskaya EA, Miroshnichenko ML.

Int J Syst Evol Microbiol. 2017 May;67(5):1486-1490. doi: 10.1099/ijsem.0.001744. Epub 2017 May 30.

PMID:
27983475
9.

Desulfonatronospira sulfatiphila sp. nov., and Desulfitispora elongata sp. nov., two novel haloalkaliphilic sulfidogenic bacteria from soda lakes.

Sorokin DY, Chernyh NA.

Int J Syst Evol Microbiol. 2017 Feb;67(2):396-401. doi: 10.1099/ijsem.0.001640. Epub 2017 Feb 24.

PMID:
27902279
10.
11.

Dissulfurimicrobium hydrothermale gen. nov., sp. nov., a thermophilic, autotrophic, sulfur-disproportionating deltaproteobacterium isolated from a hydrothermal pond.

Slobodkin AI, Slobodkina GB, Panteleeva AN, Chernyh NA, Novikov AA, Bonch-Osmolovskaya EA.

Int J Syst Evol Microbiol. 2016 Feb;66(2):1022-1026. doi: 10.1099/ijsem.0.000828. Epub 2015 Dec 8.

PMID:
26646853
12.

Microbial life in Bourlyashchy, the hottest thermal pool of Uzon Caldera, Kamchatka.

Chernyh NA, Mardanov AV, Gumerov VM, Miroshnichenko ML, Lebedinsky AV, Merkel AY, Crowe D, Pimenov NV, Rusanov II, Ravin NV, Moran MA, Bonch-Osmolovskaya EA.

Extremophiles. 2015 Nov;19(6):1157-71. doi: 10.1007/s00792-015-0787-5. Epub 2015 Sep 8.

PMID:
26349929
13.

Desulfonatronobacter acetoxydans sp. nov.,: a first acetate-oxidizing, extremely salt-tolerant alkaliphilic SRB from a hypersaline soda lake.

Sorokin DY, Chernyh NA, Poroshina MN.

Extremophiles. 2015 Sep;19(5):899-907. doi: 10.1007/s00792-015-0765-y. Epub 2015 Jun 18.

14.

Pyrobaculum ferrireducens sp. nov., a hyperthermophilic Fe(III)-, selenate- and arsenate-reducing crenarchaeon isolated from a hot spring.

Slobodkina GB, Lebedinsky AV, Chernyh NA, Bonch-Osmolovskaya EA, Slobodkin AI.

Int J Syst Evol Microbiol. 2015 Mar;65(Pt 3):851-6. doi: 10.1099/ijs.0.000027. Epub 2014 Dec 15.

PMID:
25510975
15.

Detection of putatively thermophilic anaerobic methanotrophs in diffuse hydrothermal vent fluids.

Merkel AY, Huber JA, Chernyh NA, Bonch-Osmolovskaya EA, Lebedinsky AV.

Appl Environ Microbiol. 2013 Feb;79(3):915-23. doi: 10.1128/AEM.03034-12. Epub 2012 Nov 26.

16.

Complete genome sequence of the hyperthermophilic archaeon Thermococcus sp. strain AM4, capable of organotrophic growth and growth at the expense of hydrogenogenic or sulfidogenic oxidation of carbon monoxide.

Oger P, Sokolova TG, Kozhevnikova DA, Chernyh NA, Bartlett DH, Bonch-Osmolovskaya EA, Lebedinsky AV.

J Bacteriol. 2011 Dec;193(24):7019-20. doi: 10.1128/JB.06259-11.

17.

Moorella humiferrea sp. nov., a thermophilic, anaerobic bacterium capable of growth via electron shuttling between humic acid and Fe(III).

Nepomnyashchaya YN, Slobodkina GB, Baslerov RV, Chernyh NA, Bonch-Osmolovskaya EA, Netrusov AI, Slobodkin AI.

Int J Syst Evol Microbiol. 2012 Mar;62(Pt 3):613-7. doi: 10.1099/ijs.0.029009-0. Epub 2011 Apr 29.

PMID:
21531740
18.

Fervidobacterium riparium sp. nov., a thermophilic anaerobic cellulolytic bacterium isolated from a hot spring.

Podosokorskaya OA, Merkel AY, Kolganova TV, Chernyh NA, Miroshnichenko ML, Bonch-Osmolovskaya EA, Kublanov IV.

Int J Syst Evol Microbiol. 2011 Nov;61(Pt 11):2697-701. doi: 10.1099/ijs.0.026070-0. Epub 2010 Dec 17.

PMID:
21169457
19.

Caldanaerobacter uzonensis sp. nov., an anaerobic, thermophilic, heterotrophic bacterium isolated from a hot spring.

Kozina IV, Kublanov IV, Kolganova TV, Chernyh NA, Bonch-Osmolovskaya EA.

Int J Syst Evol Microbiol. 2010 Jun;60(Pt 6):1372-5. doi: 10.1099/ijs.0.012328-0. Epub 2009 Aug 11.

PMID:
19671728
20.

Deferribacter autotrophicus sp. nov., an iron(III)-reducing bacterium from a deep-sea hydrothermal vent.

Slobodkina GB, Kolganova TV, Chernyh NA, Querellou J, Bonch-Osmolovskaya EA, Slobodkin AI.

Int J Syst Evol Microbiol. 2009 Jun;59(Pt 6):1508-12. doi: 10.1099/ijs.0.006767-0.

PMID:
19502344
21.

Caldimicrobium rimae gen. nov., sp. nov., an extremely thermophilic, facultatively lithoautotrophic, anaerobic bacterium from the Uzon Caldera, Kamchatka.

Miroshnichenko ML, Lebedinsky AV, Chernyh NA, Tourova TP, Kolganova TV, Spring S, Bonch-Osmolovskaya EA.

Int J Syst Evol Microbiol. 2009 May;59(Pt 5):1040-4. doi: 10.1099/ijs.0.006072-0.

PMID:
19406789
22.

Complete genome sequence of the anaerobic, protein-degrading hyperthermophilic crenarchaeon Desulfurococcus kamchatkensis.

Ravin NV, Mardanov AV, Beletsky AV, Kublanov IV, Kolganova TV, Lebedinsky AV, Chernyh NA, Bonch-Osmolovskaya EA, Skryabin KG.

J Bacteriol. 2009 Apr;191(7):2371-9. doi: 10.1128/JB.01525-08. Epub 2008 Dec 29.

23.

Phylogenetic systematics of microorganisms inhabiting thermal environments.

Lebedinsky AV, Chernyh NA, Bonch-Osmolovskaya EA.

Biochemistry (Mosc). 2007 Dec;72(12):1299-312. Review.

24.

Characterization of technetium(vII) reduction by cell suspensions of thermophilic bacteria and archaea.

Chernyh NA, Gavrilov SN, Sorokin VV, German KE, Sergeant C, Simonoff M, Robb F, Slobodkin AI.

Appl Microbiol Biotechnol. 2007 Aug;76(2):467-72. Epub 2007 Jul 7.

PMID:
17619187
25.

Thermincola ferriacetica sp. nov., a new anaerobic, thermophilic, facultatively chemolithoautotrophic bacterium capable of dissimilatory Fe(III) reduction.

Zavarzina DG, Sokolova TG, Tourova TP, Chernyh NA, Kostrikina NA, Bonch-Osmolovskaya EA.

Extremophiles. 2007 Jan;11(1):1-7. Epub 2006 Sep 20.

PMID:
16988758
26.

Thermincola carboxydiphila gen. nov., sp. nov., a novel anaerobic, carboxydotrophic, hydrogenogenic bacterium from a hot spring of the Lake Baikal area.

Sokolova TG, Kostrikina NA, Chernyh NA, Kolganova TV, Tourova TP, Bonch-Osmolovskaya EA.

Int J Syst Evol Microbiol. 2005 Sep;55(Pt 5):2069-73.

PMID:
16166711
27.

Desulfurococcus fermentans sp. nov., a novel hyperthermophilic archaeon from a Kamchatka hot spring, and emended description of the genus Desulfurococcus.

Perevalova AA, Svetlichny VA, Kublanov IV, Chernyh NA, Kostrikina NA, Tourova TP, Kuznetsov BB, Bonch-Osmolovskaya EA.

Int J Syst Evol Microbiol. 2005 May;55(Pt 3):995-9.

PMID:
15879224
28.

Thermosinus carboxydivorans gen. nov., sp. nov., a new anaerobic, thermophilic, carbon-monoxide-oxidizing, hydrogenogenic bacterium from a hot pool of Yellowstone National Park.

Sokolova TG, González JM, Kostrikina NA, Chernyh NA, Slepova TV, Bonch-Osmolovskaya EA, Robb FT.

Int J Syst Evol Microbiol. 2004 Nov;54(Pt 6):2353-9.

PMID:
15545483
29.

PCR-based identification of hyperthermophilic archaea of the family Thermococcaceae.

Slobodkina GB, Chernyh NA, Slobodkin AI, Subbotina IV, Bonch-Osmolovskaya EA, Lebedinsky AV.

Appl Environ Microbiol. 2004 Sep;70(9):5701-3.

30.

The first evidence of anaerobic CO oxidation coupled with H2 production by a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent.

Sokolova TG, Jeanthon C, Kostrikina NA, Chernyh NA, Lebedinsky AV, Stackebrandt E, Bonch-Osmolovskaya EA.

Extremophiles. 2004 Aug;8(4):317-23. Epub 2004 May 26.

PMID:
15164268
31.

Radioisotopic, culture-based, and oligonucleotide microchip analyses of thermophilic microbial communities in a continental high-temperature petroleum reservoir.

Bonch-Osmolovskaya EA, Miroshnichenko ML, Lebedinsky AV, Chernyh NA, Nazina TN, Ivoilov VS, Belyaev SS, Boulygina ES, Lysov YP, Perov AN, Mirzabekov AD, Hippe H, Stackebrandt E, L'Haridon S, Jeanthon C.

Appl Environ Microbiol. 2003 Oct;69(10):6143-51.

32.

Tepidibacter thalassicus gen. nov., sp. nov., a novel moderately thermophilic, anaerobic, fermentative bacterium from a deep-sea hydrothermal vent.

Slobodkin AI, Tourova TP, Kostrikina NA, Chernyh NA, Bonch-Osmolovskaya EA, Jeanthon C, Jones BE.

Int J Syst Evol Microbiol. 2003 Jul;53(Pt 4):1131-4.

PMID:
12892139
33.

Caldithrix abyssi gen. nov., sp. nov., a nitrate-reducing, thermophilic, anaerobic bacterium isolated from a Mid-Atlantic Ridge hydrothermal vent, represents a novel bacterial lineage.

Miroshnichenko ML, Kostrikina NA, Chernyh NA, Pimenov NV, Tourova TP, Antipov AN, Spring S, Stackebrandt E, Bonch-Osmolovskaya EA.

Int J Syst Evol Microbiol. 2003 Jan;53(Pt 1):323-9.

PMID:
12656191
34.

Carboxydocella thermautotrophica gen. nov., sp. nov., a novel anaerobic, CO-utilizing thermophile from a Kamchatkan hot spring.

Sokolova TG, Kostrikina NA, Chernyh NA, Tourova TP, Kolganova TV, Bonch-Osmolovskaya EA.

Int J Syst Evol Microbiol. 2002 Nov;52(Pt 6):1961-7.

PMID:
12508854
35.

Isolation and characterization of Thermococcus sibiricus sp. nov. from a Western Siberia high-temperature oil reservoir.

Miroshnichenko ML, Hippe H, Stackebrandt E, Kostrikina NA, Chernyh NA, Jeanthon C, Nazina TN, Belyaev SS, Bonch-Osmolovskaya EA.

Extremophiles. 2001 Apr;5(2):85-91.

PMID:
11354459
36.

Carboxydobrachium pacificum gen. nov., sp. nov., a new anaerobic, thermophilic, CO-utilizing marine bacterium from Okinawa Trough.

Sokolova TG, González JM, Kostrikina NA, Chernyh NA, Tourova TP, Kato C, Bonch-Osmolovskaya EA, Robb FT.

Int J Syst Evol Microbiol. 2001 Jan;51(Pt 1):141-9.

PMID:
11211251
37.

Acidilobus aceticus gen. nov., sp. nov., a novel anaerobic thermoacidophilic archaeon from continental hot vents in Kamchatka.

Prokofeva MI, Miroshnichenko ML, Kostrikina NA, Chernyh NA, Kuznetsov BB, Tourova TP, Bonch-Osmolovskaya EA.

Int J Syst Evol Microbiol. 2000 Nov;50 Pt 6:2001-8.

PMID:
11155973
38.

Investigation of structure and antigenic capacities of Thermococcales cell envelopes and reclassification of "Caldococcus litoralis" Z-1301 as Thermococcus litoralis Z-1301.

Kostyukova AS, Gongadze GM, Polosina YY, Bonch-Osmolovskaya EA, Miroshnichenko ML, Chernyh NA, Obraztsova MV, Svetlichny VA, Messner P, Sleytr UB, L'Haridon S, Jeanthon C, Prieur D.

Extremophiles. 1999 Nov;3(4):239-45.

PMID:
10591013
39.

Thermoanaerobacter siderophilus sp. nov., a novel dissimilatory Fe(III)-reducing, anaerobic, thermophilic bacterium.

Slobodkin AI, Tourova TP, Kuznetsov BB, Kostrikina NA, Chernyh NA, Bonch-Osmolovskaya EA.

Int J Syst Bacteriol. 1999 Oct;49 Pt 4:1471-8.

PMID:
10555328
40.

Desulfurella kamchatkensis sp. nov. and desulfurella propionica sp. nov., new sulfur-respiring thermophilic bacteria from Kamchatka thermal environments.

Miroshnichenko ML, Rainey FA, Hippe H, Chernyh NA, Kostrikina NA, Bonch-Osmolovskaya EA.

Int J Syst Bacteriol. 1998 Apr;48 Pt 2:475-9.

PMID:
9731287
41.

Thermococcus gorgonarius sp. nov. and Thermococcus pacificus sp. nov.: heterotrophic extremely thermophilic archaea from New Zealand submarine hot vents.

Miroshnichenko ML, Gongadze GM, Rainey FA, Kostyukova AS, Lysenko AM, Chernyh NA, Bonch-Osmolovskaya EA.

Int J Syst Bacteriol. 1998 Jan;48 Pt 1:23-9.

PMID:
9542072

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