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Items: 23


TDR Targets 6: driving drug discovery for human pathogens through intensive chemogenomic data integration.

Urán Landaburu L, Berenstein AJ, Videla S, Maru P, Shanmugam D, Chernomoretz A, Agüero F.

Nucleic Acids Res. 2019 Nov 4. pii: gkz999. doi: 10.1093/nar/gkz999. [Epub ahead of print]


Ultrasensitivity in signaling cascades revisited: Linking local and global ultrasensitivity estimations.

Altszyler E, Ventura AC, Colman-Lerner A, Chernomoretz A.

PLoS One. 2017 Jun 29;12(6):e0180083. doi: 10.1371/journal.pone.0180083. eCollection 2017.


Reprogramming human A375 amelanotic melanoma cells by catalase overexpression: Upregulation of antioxidant genes correlates with regression of melanoma malignancy and with malignant progression when downregulated.

Bracalente C, Ibañez IL, Berenstein A, Notcovich C, Cerda MB, Klamt F, Chernomoretz A, Durán H.

Oncotarget. 2016 Jul 5;7(27):41154-41171. doi: 10.18632/oncotarget.9273.


Uncovering disease mechanisms through network biology in the era of Next Generation Sequencing.

Piñero J, Berenstein A, Gonzalez-Perez A, Chernomoretz A, Furlong LI.

Sci Rep. 2016 Apr 15;6:24570. doi: 10.1038/srep24570.


A Multilayer Network Approach for Guiding Drug Repositioning in Neglected Diseases.

Berenstein AJ, Magariños MP, Chernomoretz A, Agüero F.

PLoS Negl Trop Dis. 2016 Jan 6;10(1):e0004300. doi: 10.1371/journal.pntd.0004300. eCollection 2016 Jan.


The spliceosome assembly factor GEMIN2 attenuates the effects of temperature on alternative splicing and circadian rhythms.

Schlaen RG, Mancini E, Sanchez SE, Perez-Santángelo S, Rugnone ML, Simpson CG, Brown JW, Zhang X, Chernomoretz A, Yanovsky MJ.

Proc Natl Acad Sci U S A. 2015 Jul 28;112(30):9382-7. doi: 10.1073/pnas.1504541112. Epub 2015 Jul 13.


Fibulin-2 is a key mediator of the pro-neurogenic effect of TGF-beta1 on adult neural stem cells.

Radice PD, Mathieu P, Leal MC, Farías MI, Ferrari C, Puntel M, Salibe M, Chernomoretz A, Pitossi FJ.

Mol Cell Neurosci. 2015 Jul;67:75-83. doi: 10.1016/j.mcn.2015.06.004. Epub 2015 Jun 5.


Mining the modular structure of protein interaction networks.

Berenstein AJ, Piñero J, Furlong LI, Chernomoretz A.

PLoS One. 2015 Apr 9;10(4):e0122477. doi: 10.1371/journal.pone.0122477. eCollection 2015.


Identification and functional analysis of healing regulators in Drosophila.

Álvarez-Fernández C, Tamirisa S, Prada F, Chernomoretz A, Podhajcer O, Blanco E, Martín-Blanco E.

PLoS Genet. 2015 Feb 3;11(2):e1004965. doi: 10.1371/journal.pgen.1004965. eCollection 2015.


Impact of upstream and downstream constraints on a signaling module's ultrasensitivity.

Altszyler E, Ventura A, Colman-Lerner A, Chernomoretz A.

Phys Biol. 2014 Oct 14;11(6):066003. doi: 10.1088/1478-3975/11/6/066003.


Role for LSM genes in the regulation of circadian rhythms.

Perez-Santángelo S, Mancini E, Francey LJ, Schlaen RG, Chernomoretz A, Hogenesch JB, Yanovsky MJ.

Proc Natl Acad Sci U S A. 2014 Oct 21;111(42):15166-71. doi: 10.1073/pnas.1409791111. Epub 2014 Oct 6.


Utilization of extracellular information before ligand-receptor binding reaches equilibrium expands and shifts the input dynamic range.

Ventura AC, Bush A, Vasen G, Goldín MA, Burkinshaw B, Bhattacharjee N, Folch A, Brent R, Chernomoretz A, Colman-Lerner A.

Proc Natl Acad Sci U S A. 2014 Sep 16;111(37):E3860-9. doi: 10.1073/pnas.1322761111. Epub 2014 Aug 29.


LNK genes integrate light and clock signaling networks at the core of the Arabidopsis oscillator.

Rugnone ML, Faigón Soverna A, Sanchez SE, Schlaen RG, Hernando CE, Seymour DK, Mancini E, Chernomoretz A, Weigel D, Más P, Yanovsky MJ.

Proc Natl Acad Sci U S A. 2013 Jul 16;110(29):12120-5. doi: 10.1073/pnas.1302170110. Epub 2013 Jul 1.


MISTIC: Mutual information server to infer coevolution.

Simonetti FL, Teppa E, Chernomoretz A, Nielsen M, Marino Buslje C.

Nucleic Acids Res. 2013 Jul;41(Web Server issue):W8-14. doi: 10.1093/nar/gkt427. Epub 2013 May 28.


Using Cell-ID 1.4 with R for microscope-based cytometry.

Bush A, Chernomoretz A, Yu R, Gordon A, Colman-Lerner A.

Curr Protoc Mol Biol. 2012 Oct;Chapter 14:Unit 14.18. doi: 10.1002/0471142727.mb1418s100.


Staufen: from embryo polarity to cellular stress and neurodegeneration.

Tosar LJ, Thomas MG, Baez MV, Ibanez I, Chernomoretz A, Boccaccio GL.

Front Biosci (Schol Ed). 2012 Jan 1;4:432-52. Review.


Modular organization of brain resting state networks in chronic back pain patients.

Balenzuela P, Chernomoretz A, Fraiman D, Cifre I, Sitges C, Montoya P, Chialvo DR.

Front Neuroinform. 2010 Nov 17;4:116. doi: 10.3389/fninf.2010.00116. eCollection 2010.


Using Cell-ID 1.4 with R for microscope-based cytometry.

Chernomoretz A, Bush A, Yu R, Gordon A, Colman-Lerner A.

Curr Protoc Mol Biol. 2008 Oct;Chapter 14:Unit 14.18. doi: 10.1002/0471142727.mb1418s84.


Reduced glioma growth following dexamethasone or anti-angiopoietin 2 treatment.

Villeneuve J, Galarneau H, Beaudet MJ, Tremblay P, Chernomoretz A, Vallières L.

Brain Pathol. 2008 Jul;18(3):401-14. doi: 10.1111/j.1750-3639.2008.00139.x. Epub 2008 Mar 26.


Genes involved in the balance between neuronal survival and death during inflammation.

Glezer I, Chernomoretz A, David S, Plante MM, Rivest S.

PLoS One. 2007 Mar 21;2(3):e310.


Identification of genes preferentially expressed by microglia and upregulated during cuprizone-induced inflammation.

Bédard A, Tremblay P, Chernomoretz A, Vallières L.

Glia. 2007 Jun;55(8):777-89.


Dehydroepiandrosterone (DHEA) is an anabolic steroid like dihydrotestosterone (DHT), the most potent natural androgen, and tetrahydrogestrinone (THG).

Labrie F, Luu-The V, Martel C, Chernomoretz A, Calvo E, Morissette J, Labrie C.

J Steroid Biochem Mol Biol. 2006 Jul;100(1-3):52-8. Epub 2006 Jun 21.


Slow time evolution of two-time-scale reaction-diffusion systems: the physical origin of nondiffusive transport.

Strier DE, Chernomoretz A, Ponce Dawson S.

Phys Rev E Stat Nonlin Soft Matter Phys. 2002 Apr;65(4 Pt 2A):046233. Epub 2002 Apr 11.


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