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Items: 45

1.

shRNA library screening identifies nucleocytoplasmic transport as a mediator of BCR-ABL1 kinase-independent resistance.

Khorashad JS, Eiring AM, Mason CC, Gantz KC, Bowler AD, Redwine HM, Yu F, Kraft IL, Pomicter AD, Reynolds KR, Iovino AJ, Zabriskie MS, Heaton WL, Tantravahi SK, Kauffman M, Shacham S, Chenchik A, Bonneau K, Ullman KS, O'Hare T, Deininger MW.

Blood. 2015 Mar 12;125(11):1772-81. doi: 10.1182/blood-2014-08-588855. Epub 2015 Jan 8.

2.

Protein kinase A type II-α regulatory subunit regulates the response of prostate cancer cells to taxane treatment.

Zynda ER, Matveev V, Makhanov M, Chenchik A, Kandel ES.

Cell Cycle. 2014;13(20):3292-301. doi: 10.4161/15384101.2014.949501.

3.

Use of RNAi screens to uncover resistance mechanisms in cancer cells and identify synthetic lethal interactions.

Diehl P, Tedesco D, Chenchik A.

Drug Discov Today Technol. 2014 Mar;11:11-8. doi: 10.1016/j.ddtec.2013.12.002. Review.

4.

Peptides genetically selected for NF-κB activation cooperate with oncogene Ras and model carcinogenic role of inflammation.

Natarajan V, Komarov AP, Ippolito T, Bonneau K, Chenchik AA, Gudkov AV.

Proc Natl Acad Sci U S A. 2014 Jan 28;111(4):E474-83. doi: 10.1073/pnas.1311945111. Epub 2014 Jan 13.

5.

Measurement of Cancer Cell Growth Heterogeneity through Lentiviral Barcoding Identifies Clonal Dominance as a Characteristic of In Vivo Tumor Engraftment.

Nolan-Stevaux O, Tedesco D, Ragan S, Makhanov M, Chenchik A, Ruefli-Brasse A, Quon K, Kassner PD.

PLoS One. 2013 Jun 26;8(6):e67316. doi: 10.1371/journal.pone.0067316. Print 2013.

6.

p53 cooperates with DNA methylation and a suicidal interferon response to maintain epigenetic silencing of repeats and noncoding RNAs.

Leonova KI, Brodsky L, Lipchick B, Pal M, Novototskaya L, Chenchik AA, Sen GC, Komarova EA, Gudkov AV.

Proc Natl Acad Sci U S A. 2013 Jan 2;110(1):E89-98. doi: 10.1073/pnas.1216922110. Epub 2012 Dec 10.

7.

Long-distance effects of insertional mutagenesis.

Singhal R, Deng X, Chenchik AA, Kandel ES.

PLoS One. 2011 Jan 5;6(1):e15832. doi: 10.1371/journal.pone.0015832.

8.

Screening of cell death genes with a mammalian genome-wide RNAi library.

Tsujii H, Eguchi Y, Chenchik A, Mizutani T, Yamada K, Tsujimoto Y.

J Biochem. 2010 Aug;148(2):157-70. doi: 10.1093/jb/mvq042. Epub 2010 Apr 26.

PMID:
20421362
9.

[Genome-wide lentivector-based pooled shRNA library optimization].

Gur'ianova OA, Makhanov M, Chenchik AA, Chumakov PM, Frolova EI.

Mol Biol (Mosk). 2006 May-Jun;40(3):448-59. Russian.

PMID:
16813164
10.

Optimization of a Genome-Wide Disordered Lentivector-Based Short Hairpin RNA Library.

Guryanova OA, Makhanov M, Chenchik AA, Chumakov PM, Frolova EI.

Mol Biol. 2006 May 1;40(3):396-405.

11.

Disease profiling arrays: reverse format cDNA arrays complimentary to microarrays.

Zhumabayeva B, Chenchik A, Siebert PD, Herrler M.

Adv Biochem Eng Biotechnol. 2004;86:191-213. Review.

PMID:
15088766
12.

Plastic microarrays: a novel array support combining the benefits of macro- and microarrays.

Munishkin A, Faulstich K, Aivazachvili V, Granger C, Chenchik A.

Methods Mol Biol. 2003;224:31-54. No abstract available.

PMID:
12710664
13.

Nylon cDNA expression arrays.

Jokhadze G, Chen S, Granger C, Chenchik A.

Methods Mol Biol. 2003;224:9-29. No abstract available.

PMID:
12710663
14.

Amplification of cDNA ends using PCR suppression effect and step-out PCR.

Matz MV, Alieva NO, Chenchik A, Lukyanov S.

Methods Mol Biol. 2003;221:41-9. No abstract available.

PMID:
12703732
15.

Gene expression profiling in postmortem Rett Syndrome brain: differential gene expression and patient classification.

Colantuoni C, Jeon OH, Hyder K, Chenchik A, Khimani AH, Narayanan V, Hoffman EP, Kaufmann WE, Naidu S, Pevsner J.

Neurobiol Dis. 2001 Oct;8(5):847-65.

PMID:
11592853
16.

Reverse transcriptase template switching: a SMART approach for full-length cDNA library construction.

Zhu YY, Machleder EM, Chenchik A, Li R, Siebert PD.

Biotechniques. 2001 Apr;30(4):892-7.

17.

Use of SMART-generated cDNA for gene expression studies in multiple human tumors.

Zhumabayeva B, Diatchenko L, Chenchik A, Siebert PD.

Biotechniques. 2001 Jan;30(1):158-63.

18.

Specific pattern of p53 phosphorylation during nitric oxide-induced cell cycle arrest.

Nakaya N, Lowe SW, Taya Y, Chenchik A, Enikolopov G.

Oncogene. 2000 Dec 14;19(54):6369-75.

19.

RecA-mediated affinity capture: a method for full-length cDNA cloning.

Zhumabayeva B, Chenchik A, Siebert PD.

Biotechniques. 1999 Oct;27(4):834-6, 838, 840 passim.

20.

cDNA expression array reveals heterogeneous gene expression profiles in three glioblastoma cell lines.

Rhee CH, Hess K, Jabbur J, Ruiz M, Yang Y, Chen S, Chenchik A, Fuller GN, Zhang W.

Oncogene. 1999 Apr 29;18(17):2711-7.

21.

Amplification of cDNA ends based on template-switching effect and step-out PCR.

Matz M, Shagin D, Bogdanova E, Britanova O, Lukyanov S, Diatchenko L, Chenchik A.

Nucleic Acids Res. 1999 Mar 15;27(6):1558-60.

22.

Characterization of cellular pathways involved in glioblastoma response to the chemotherapeutic agent 1, 3-bis(2-chloroethyl)-1-nitrosourea (BCNU) by gene expression profiling.

Rhee CH, Ruan S, Chen S, Chenchik A, Levin VA, Yung AW, Fuller GN, Zhang W.

Oncol Rep. 1999 Mar-Apr;6(2):393-401.

PMID:
10023010
23.

Construction of cDNA libraries from small amounts of total RNA using the suppression PCR effect.

Lukyanov K, Diatchenko L, Chenchik A, Nanisetti A, Siebert P, Usman N, Matz M, Lukyanov S.

Biochem Biophys Res Commun. 1997 Jan 13;230(2):285-8.

PMID:
9016767
24.

[A method for obtaining the normalized cDNA libraries based on the effect of suppression of polymerase chain reaction].

Luk'ianov KA, Gurskaia IG, Matts MV, Khaspekov GL, D'iachenko LB, Chenchik AA, Il'evich-Stuchkov SG, Luk'ianov SA.

Bioorg Khim. 1996 Sep;22(9):686-90. Russian.

PMID:
8999786
25.

Full-length cDNA cloning and determination of mRNA 5' and 3' ends by amplification of adaptor-ligated cDNA.

Chenchik A, Diachenko L, Moqadam F, Tarabykin V, Lukyanov S, Siebert PD.

Biotechniques. 1996 Sep;21(3):526-34.

26.

Equalizing cDNA subtraction based on selective suppression of polymerase chain reaction: cloning of Jurkat cell transcripts induced by phytohemaglutinin and phorbol 12-myristate 13-acetate.

Gurskaya NG, Diatchenko L, Chenchik A, Siebert PD, Khaspekov GL, Lukyanov KA, Vagner LL, Ermolaeva OD, Lukyanov SA, Sverdlov ED.

Anal Biochem. 1996 Aug 15;240(1):90-7.

PMID:
8811883
27.

Suppression subtractive hybridization: a method for generating differentially regulated or tissue-specific cDNA probes and libraries.

Diatchenko L, Lau YF, Campbell AP, Chenchik A, Moqadam F, Huang B, Lukyanov S, Lukyanov K, Gurskaya N, Sverdlov ED, Siebert PD.

Proc Natl Acad Sci U S A. 1996 Jun 11;93(12):6025-30.

28.

Combining the technique of RNA fingerprinting and differential display to obtain differentially expressed mRNA.

Diachenko LB, Ledesma J, Chenchik AA, Siebert PD.

Biochem Biophys Res Commun. 1996 Feb 27;219(3):824-8.

PMID:
8645264
29.

[New hot start technology in the polymerase chain reaction].

Rybalkin IN, Mukhamedova NM, Vlasik TN, Chenchik AA.

Biull Eksp Biol Med. 1996 Feb;121(2):238-40. Russian. No abstract available.

PMID:
9026140
30.

An improved PCR method for walking in uncloned genomic DNA.

Siebert PD, Chenchik A, Kellogg DE, Lukyanov KA, Lukyanov SA.

Nucleic Acids Res. 1995 Mar 25;23(6):1087-8. No abstract available.

31.

[Analysis of effectiveness of cDNA synthesis, induced using complementary primers and primers containing a noncomplementary base matrix].

D'iachenko LB, Chenchik AA, Khaspekov GL, Tatarenko AO, Bibilashvili RSh.

Mol Biol (Mosk). 1994 Sep-Oct;28(5):1014-27. Russian.

PMID:
7527482
32.

TaqStart Antibody: "hot start" PCR facilitated by a neutralizing monoclonal antibody directed against Taq DNA polymerase.

Kellogg DE, Rybalkin I, Chen S, Mukhamedova N, Vlasik T, Siebert PD, Chenchik A.

Biotechniques. 1994 Jun;16(6):1134-7.

PMID:
8074881
33.

[Derivatives of ddUTP, modified at the 5-position of uridine, as substrate terminators of reverse transcriptase. Hydrolysis of oligonucleotides, terminated by these analogs, by phosphodiesterase I].

D'iachenko LB, Chenchik AA, Lukin MA, Aleksandrova LA, Kraevskiĭ AA, Bibilashvili RSh.

Mol Biol (Mosk). 1994 Jan-Feb;28(1):102-12. Russian.

PMID:
7511782
34.

Application of poly(A)+RNA patterns method for searching of differentially expressed genes.

Chenchik AA, Diachenko LB, Beabealashvilli RSh.

FEBS Lett. 1993 Jun 14;324(2):136-9.

35.

Modified acid guanidinium thiocyanate-phenol-chloroform RNA extraction method which greatly reduces DNA contamination.

Siebert PD, Chenchik A.

Nucleic Acids Res. 1993 Apr 25;21(8):2019-20. No abstract available.

36.

Analysis of poly(A)+RNA patterns in human tissues.

Chenchik AA, Diachenko LB, Beabealashvilli RS.

FEBS Lett. 1993 Apr 19;321(1):98-101.

37.

[Quantitative analysis of individual RNA in preparations of poly(A)+-RNA mammalian cells].

Chenchik AA, D'iachenko LV, Bibilashvili RSh.

Mol Biol (Mosk). 1992 Sep-Oct;26(5):1181-94. Russian.

PMID:
1281908
38.

Localization of apolipoprotein E in normal and atherosclerotic human aorta.

Babaev VR, Dergunov AD, Chenchik AA, Tararak EM, Yanushevskaya EV, Trakht IN, Sorg C, Smirnov VN.

Atherosclerosis. 1990 Dec;85(2-3):239-47.

PMID:
2102087
39.

Escherichia coli and Pseudomonas putida RNA polymerases display identical contacts with promoters.

Gragerov AI, Chenchik AA, Aivasashvilli VA, Beabealashvilli RSh, Nikiforov VG.

Mol Gen Genet. 1984;195(3):511-5.

PMID:
6236350
40.

Processive pyrophosphorolysis of RNA by Escherichia coli RNA polymerase.

Rozovskaya TA, Chenchik AA, Beabealashvilli RSh.

FEBS Lett. 1982 Jan 11;137(1):100-4. No abstract available.

41.

[Contacts of Escherichia coli RNA polymerase subunits with nucleotides of lacUV5 promoter].

Chenchik AA, Bibilashvili RSh, Mirzabekov AD, Shik VV.

Mol Biol (Mosk). 1982 Jan-Feb;16(1):35-46. Russian.

PMID:
7040939
42.

[Pyrophosphate analogs in the pyrophosphorolysis reaction catalyzed by Escherichia coli RNA polymerase].

Rozovskaia TA, Chenchik AA, Tarusova NB, Bibilashvili RSh, Khomutov RM.

Mol Biol (Mosk). 1981 Nov-Dec;15(6):1205-23. Russian.

PMID:
6275257
43.

[Reaction of pyrophosphorolysis catalyzed by Escherichia coli RNA polymerase].

Rozovskaia TA, Chenchik AA, Bibilashvili RSh.

Mol Biol (Mosk). 1981 May-Jun;15(3):636-52. Russian.

PMID:
6265761
44.

[Topography of the interaction of bacterial RNA polymerase subunits with lac UV5 promotor].

Chenchik AA, Bibilashvili RSh, Mirabekov AD.

Dokl Akad Nauk SSSR. 1981;260(3):765-8. Russian. No abstract available.

PMID:
7030680
45.

[Methylation of E. coli RNA polymerase with dimethylsulfate].

Chenchik AA, Bibilashvili RSh.

Mol Biol (Mosk). 1977 Mar-Apr;11(2):403-9. Russian.

PMID:
379599

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