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Application of the Milan System for Reporting Salivary Gland Cytopathology: A retrospective study in a tertiary institute.

Chen YA, Wu CY, Yang CS.

Diagn Cytopathol. 2019 Jul 16. doi: 10.1002/dc.24279. [Epub ahead of print]


Practical applications of CISS MRI in spine imaging.

Li Z, Chen YA, Chow D, Talbott J, Glastonbury C, Shah V.

Eur J Radiol Open. 2019 Jun 27;6:231-242. doi: 10.1016/j.ejro.2019.06.001. eCollection 2019.

Free PMC Article

Non-target Effects of Naphthalene on the Soil Microbial Biomass and Bacterial Communities in the Subalpine Forests of Western China.

Lan L, Yang F, Zhang L, Yang W, Wu F, Xu Z, Liu Y, Yue K, Ni X, Li H, Liao S, Liu Y, Chen Y, Tan B.

Sci Rep. 2019 Jul 8;9(1):9811. doi: 10.1038/s41598-019-46394-3.


[Dose-response Relationship of Dexmedetomidine Combined with Sufentail for Postoperative Intravenous Analgesia in Video-assisted Thoracoscopic Surgery].

Tan XL, Chen YY, Hu B, Zhou QM, Shao WD, Xu B, Xiao HP, Zhang XA.

Zhongguo Yi Xue Ke Xue Yuan Xue Bao. 2019 Jun 30;41(3):373-378. doi: 10.3881/j.issn.1000-503X.10881. Chinese.


Quick-SOFA score ≥ 2 predicts prolonged hospital stay in geriatric patients with influenza infection.

Yeh CC, Chen YA, Hsu CC, Chen JH, Chen WL, Huang CC, Chung JY.

Am J Emerg Med. 2019 Jun 25. pii: S0735-6757(19)30422-X. doi: 10.1016/j.ajem.2019.06.041. [Epub ahead of print]


Assessing drug target suitability using TargetMine.

Chen YA, Yogo E, Kurihara N, Ohno T, Higuchi C, Rokushima M, Mizuguchi K.

Version 2. F1000Res. 2019 Feb 28 [revised 2019 Jan 1];8:233. doi: 10.12688/f1000research.18214.2. eCollection 2019.


Validation strategies for target prediction methods.

Mathai N, Chen Y, Kirchmair J.

Brief Bioinform. 2019 Apr 9. pii: bbz026. doi: 10.1093/bib/bbz026. [Epub ahead of print]


GMSimpute: a generalized two-step Lasso approach to impute missing values in label-free mass spectrum analysis.

Li Q, Fisher K, Meng W, Fang B, Welsh E, Haura EB, Koomen JM, Eschrich SA, Fridley BL, Chen YA.

Bioinformatics. 2019 Jun 14. pii: btz488. doi: 10.1093/bioinformatics/btz488. [Epub ahead of print]


Ligand Rigidification for Enhancing the Stability of Metal-Organic Frameworks.

Lv XL, Yuan S, Xie LH, Darke HF, Chen Y, He T, Dong C, Wang B, Zhang YZ, Li JR, Zhou HC.

J Am Chem Soc. 2019 Jul 3;141(26):10283-10293. doi: 10.1021/jacs.9b02947. Epub 2019 Jun 21.


Tumor suppressor gene glycine N-methyltransferase and its potential in liver disorders and hepatocellular carcinoma.

Chen M, Yang MH, Chang MM, Tyan YC, Chen YA.

Toxicol Appl Pharmacol. 2019 Jun 3;378:114607. doi: 10.1016/j.taap.2019.114607. [Epub ahead of print] Review.


Quick-SOFA score to predict mortality among geriatric patients with influenza in the emergency department.

Chang SH, Yeh CC, Chen YA, Hsu CC, Chen JH, Chen WL, Huang CC, Chung JY.

Medicine (Baltimore). 2019 Jun;98(23):e15966. doi: 10.1097/MD.0000000000015966.


Urethral involvement in granulomatosis with polyangiitis: a case-based review.

Ahmed HMA, Elfishawi MM, Hagiga A, Ahmed IMA, Chen YL.

Rheumatol Int. 2019 Jul;39(7):1279-1284. doi: 10.1007/s00296-019-04331-7. Epub 2019 May 28. Review.


Application of laser capture microdissection and polymerase chain reaction in the diagnosis of Trichoderma longibrachiatum infection: a promising diagnostic tool for 'fungal contaminants' infection.

Zhou YB, Zhang GJ, Song YG, Sun LN, Chen YH, Sun TT, Li RY, Liu W, Li DM.

Med Mycol. 2019 May 25. pii: myz055. doi: 10.1093/mmy/myz055. [Epub ahead of print]


Strategies by which WWOX-deficient metastatic cancer cells utilize to survive via dodging, compromising, and causing damage to WWOX-positive normal microenvironment.

Chou PY, Lai FJ, Chen YA, Sie YD, Kuo HL, Su WP, Wu CY, Liu TY, Wen KY, Hsu LJ, Sze CI, Chang NS.

Cell Death Discov. 2019 May 21;5:97. doi: 10.1038/s41420-019-0176-4. eCollection 2019.


Data Warehousing with TargetMine for Omics Data Analysis.

Chen YA, Tripathi LP, Mizuguchi K.

Methods Mol Biol. 2019;1986:35-64. doi: 10.1007/978-1-4939-9442-7_3.


Identification of complete F-type mitochondrial genome in Lamprotula scripta and Lamprotula caveata and analysis on DUI.

Wang G, Wu C, Ge J, Chen Y, Han Z, Guo P, Li J.

Gene. 2019 Aug 20;710:59-65. doi: 10.1016/j.gene.2019.04.075. Epub 2019 Apr 27.


Identifying Reducing and Capping Sites of Protein-Encapsulated Gold Nanoclusters.

Hsu YC, Hung MJ, Chen YA, Wang TF, Ou YR, Chen SH.

Molecules. 2019 Apr 25;24(8). pii: E1630. doi: 10.3390/molecules24081630.


Generation of induced pluripotent stem cell line-NTUHi001-A from a premature ovarian failure patient with Turner's syndrome mosaicism.

Lu CY, Chen YA, Syu SH, Lu HE, Ho HN, Chen HF.

Stem Cell Res. 2019 May;37:101422. doi: 10.1016/j.scr.2019.101422. Epub 2019 Apr 2.


HDAC8 Regulates a Stress Response Pathway in Melanoma to Mediate Escape from BRAF Inhibitor Therapy.

Emmons MF, Faião-Flores F, Sharma R, Thapa R, Messina JL, Becker JC, Schadendorf D, Seto E, Sondak VK, Koomen JM, Chen YA, Lau EK, Wan L, Licht JD, Smalley KSM.

Cancer Res. 2019 Jun 1;79(11):2947-2961. doi: 10.1158/0008-5472.CAN-19-0040. Epub 2019 Apr 15.


Utilizing proteomic approach to identify nuclear translocation related serine kinase phosphorylation site of GNMT as downstream effector for benzo[a]pyrene.

Yang MH, Liao CC, Hung JH, Lai XT, Yen CH, Chen YA.

J Food Drug Anal. 2019 Apr;27(2):603-609. doi: 10.1016/j.jfda.2018.12.007. Epub 2019 Jan 8.


Experimental Quantum Switching for Exponentially Superior Quantum Communication Complexity.

Wei K, Tischler N, Zhao SR, Li YH, Arrazola JM, Liu Y, Zhang W, Li H, You L, Wang Z, Chen YA, Sanders BC, Zhang Q, Pryde GJ, Xu F, Pan JW.

Phys Rev Lett. 2019 Mar 29;122(12):120504. doi: 10.1103/PhysRevLett.122.120504.


A 27-year-old female presented with diffuse alveolar haemorrhage due to breast angiosarcoma with lung metastasis.

Lee PH, Chen YA, Fu PK.

Respirol Case Rep. 2019 Mar 25;7(5):e0419. doi: 10.1002/rcr2.419. eCollection 2019 Jul.


Is skeletal stability after bimaxillary surgery for skeletal class III deformity related to surgical occlusal contact?

Lo SH, Chen YA, Yao CF, Liao YF, Chen YR.

Int J Oral Maxillofac Surg. 2019 Apr 3. pii: S0901-5027(19)31001-X. doi: 10.1016/j.ijom.2019.03.895. [Epub ahead of print]


Genome-wide Analysis of Common Copy Number Variation and Epithelial Ovarian Cancer Risk.

Reid BM, Permuth JB, Chen YA, Fridley BL, Iversen ES, Chen Z, Jim H, Vierkant RA, Cunningham JM, Barnholtz-Sloan JS, Narod S, Risch H, Schildkraut JM, Goode EL, Monteiro AN, Sellers TA.

Cancer Epidemiol Biomarkers Prev. 2019 Jul;28(7):1117-1126. doi: 10.1158/1055-9965.EPI-18-0833. Epub 2019 Apr 4.


Oligomer Procyanidins from Lotus Seedpod Regulate Lipid Homeostasis Partially by Modifying Fat Emulsification and Digestion.

Li X, Chen Y, Li S, Chen M, Xiao J, Xie B, Sun Z.

J Agric Food Chem. 2019 Apr 24;67(16):4524-4534. doi: 10.1021/acs.jafc.9b01469. Epub 2019 Apr 15.


Prevention of cisplatin-induced hearing loss by extended release fluticasone propionate intracochlear implants.

Pierstorff E, Yang WW, Chen YA, Cheung S, Kalinec F, Slattery WH.

Int J Pediatr Otorhinolaryngol. 2019 Jun;121:157-163. doi: 10.1016/j.ijporl.2019.03.021. Epub 2019 Mar 20.


Responses of soil active carbon and nitrogen to short-term warming in alpine treeline of west Sichuan, China.

Ma CX, Li HJ, Zheng HF, Chen YM, Yang L, Wang LF, Zhang J, Liu Y.

Ying Yong Sheng Tai Xue Bao. 2019 Mar;30(3):718-726. doi: 10.13287/j.1001-9332.201903.006.


Extracts from Fermented Black Garlic Exhibit a Hepatoprotective Effect on Acute Hepatic Injury.

Tsai JC, Chen YA, Wu JT, Cheng KC, Lai PS, Liu KF, Lin YK, Huang YT, Hsieh CW.

Molecules. 2019 Mar 20;24(6). pii: E1112. doi: 10.3390/molecules24061112.


MCT-1/miR-34a/IL-6/IL-6R signaling axis promotes EMT progression, cancer stemness and M2 macrophage polarization in triple-negative breast cancer.

Weng YS, Tseng HY, Chen YA, Shen PC, Al Haq AT, Chen LM, Tung YC, Hsu HL.

Mol Cancer. 2019 Mar 18;18(1):42. doi: 10.1186/s12943-019-0988-0.


[The inhibition of accessory gene regulator C specific binding peptides on biofilm formation of Staphylococcus epidermidis on the surface of polyvinyl chloride in vitro].

Yang J, Qiu L, Huang Y, Chen Y, Rao S, Ruan W, Zhao G, Ye L.

Zhongguo Xiu Fu Chong Jian Wai Ke Za Zhi. 2019 Mar 15;33(3):349-355. doi: 10.7507/1002-1892.201806110. Chinese.


Breast adenosquamous cell carcinoma presented in an intracystic form.

Liu Y, Hung CC, Chen YA, Tsai IC.

Asian J Surg. 2019 Jun;42(6):711-714. doi: 10.1016/j.asjsur.2019.02.005. Epub 2019 Mar 11.


Coalescence of RAGE in Lipid Rafts in Response to Cytolethal Distending Toxin-Induced Inflammation.

Lin HJ, Jiang ZP, Lo HR, Feng CL, Chen CJ, Yang CY, Huang MZ, Wu HY, Chen YA, Chen Y, Chiu CH, Lai CH.

Front Immunol. 2019 Feb 26;10:109. doi: 10.3389/fimmu.2019.00109. eCollection 2019.


Short- and Long-term Risks of Highly Active Antiretroviral Treatment with Incident Opportunistic Infections among People Living with HIV/AIDS.

Yen YF, Chen M, Jen IA, Chuang PH, Lee CY, Lin SI, Chen YA.

Sci Rep. 2019 Mar 5;9(1):3476. doi: 10.1038/s41598-019-39665-6.


Upregulation of SPAG6 in Myelodysplastic Syndrome: Knockdown Inhibits Cell Proliferation via AKT/FOXO Signaling Pathway.

Jiang M, Chen Y, Deng L, Luo X, Wang L, Liu L.

DNA Cell Biol. 2019 May;38(5):476-484. doi: 10.1089/dna.2018.4521. Epub 2019 Mar 5.


Assessing metastatic potential of breast cancer cells based on EGFR dynamics.

Liu YL, Chou CK, Kim M, Vasisht R, Kuo YA, Ang P, Liu C, Perillo EP, Chen YA, Blocher K, Horng H, Chen YI, Nguyen DT, Yankeelov TE, Hung MC, Dunn AK, Yeh HC.

Sci Rep. 2019 Mar 4;9(1):3395. doi: 10.1038/s41598-018-37625-0.


Effects of naphthalene on soil fauna abundance and enzyme activity in the subalpine forest of western Sichuan, China.

Liu Y, Yang F, Yang W, Wu F, Xu Z, Liu Y, Zhang L, Yue K, Ni X, Lan L, Chen Y, Tan B.

Sci Rep. 2019 Feb 26;9(1):2849. doi: 10.1038/s41598-019-39603-6.


WW Domain-Containing Proteins YAP and TAZ in the Hippo Pathway as Key Regulators in Stemness Maintenance, Tissue Homeostasis, and Tumorigenesis.

Chen YA, Lu CY, Cheng TY, Pan SH, Chen HF, Chang NS.

Front Oncol. 2019 Feb 11;9:60. doi: 10.3389/fonc.2019.00060. eCollection 2019. Review.


Somatic mutations of PREX2 gene in patients with hepatocellular carcinoma.

Yang MH, Yen CH, Chen YF, Fang CC, Li CH, Lee KJ, Lin YH, Weng CH, Liu TT, Huang SF, Teh BT, Chen YA.

Sci Rep. 2019 Feb 22;9(1):2552. doi: 10.1038/s41598-018-36810-5.


Extracorporeal membrane oxygenation (ECMO)-assisted intratracheal tumor resection and carina reconstruction: A safer and more effective technique for resection and reconstruction.

Qiu Y, Chen Q, Wu W, Zhang S, Tang M, Chen Y, Zhang C, Zhou N, Jiang N, Feng J, Xia M, Wang H.

Thorac Cancer. 2019 May;10(5):1297-1302. doi: 10.1111/1759-7714.13007. Epub 2019 Feb 19.


Acral angioma serpiginosum: Clinicopathologic and dermoscopic presentation.

Lo Y, Chen YA.

Australas J Dermatol. 2019 Feb 14. doi: 10.1111/ajd.13002. [Epub ahead of print] No abstract available.


Litter removal reduced soil nitrogen mineralization in repeated freeze-thaw cycles.

Yang Y, Zhang L, Wei X, Chen Y, Yang W, Tan B, Yue K, Ni X, Wu F.

Sci Rep. 2019 Feb 14;9(1):2052. doi: 10.1038/s41598-018-38431-4.


Induction of GNMT by 1,2,3,4,6-penta-O-galloyl-beta-D-glucopyranoside through proteasome-independent MYC downregulation in hepatocellular carcinoma.

Kant R, Yen CH, Hung JH, Lu CK, Tung CY, Chang PC, Chen YH, Tyan YC, Chen YA.

Sci Rep. 2019 Feb 13;9(1):1968. doi: 10.1038/s41598-018-37292-1.


Enzymatic oxydate-triggered AgNPs etching: A novel signal-on photoelectrochemical immunosensing platform based on Ag@AgCl nanocubes loaded RGO plasmonic heterostructure.

Tang J, Xiong P, Cheng Y, Chen Y, Peng S, Zhu ZQ.

Biosens Bioelectron. 2019 Apr 1;130:125-131. doi: 10.1016/j.bios.2019.01.014. Epub 2019 Jan 15.


Melanoma central nervous system metastases: An update to approaches, challenges, and opportunities.

Eroglu Z, Holmen SL, Chen Q, Khushalani NI, Amaravadi R, Thomas R, Ahmed KA, Tawbi H, Chandra S, Markowitz J, Smalley I, Liu JKC, Chen YA, Najjar YG, Karreth FA, Abate-Daga D, Glitza IC, Sosman JA, Sondak VK, Bosenberg M, Herlyn M, Atkins MB, Kluger H, Margolin K, Forsyth PA, Davies MA, Smalley KSM.

Pigment Cell Melanoma Res. 2019 May;32(3):458-469. doi: 10.1111/pcmr.12771. Epub 2019 Feb 19.


Randomized controlled clinical effectiveness of adjunct 660-nm light-emitting diode irradiation during non-surgical periodontal therapy.

Chen YW, Hsieh O, Chen YA, Chiou LL, Chang PC.

J Formos Med Assoc. 2019 Jan 29. pii: S0929-6646(18)30864-7. doi: 10.1016/j.jfma.2019.01.010. [Epub ahead of print]


Excision recommended in high-risk patients: Revisiting the diagnosis of papilloma on core biopsy in the context of patient risk.

Chen YA, Mack JA, Karamchandani DM, Zaleski MP, Xu L, Dodge DG, Chetlen AL.

Breast J. 2019 Mar;25(2):232-236. doi: 10.1111/tbj.13200. Epub 2019 Jan 30.


Semiautomated Measure of Abdominal Adiposity Using Computed Tomography Scan Analysis.

Srikumar T, Siegel EM, Gu Y, Balagurunathan Y, Garcia AL, Chen YA, Zhou JM, Zhao X, Gillies R, Clark W, Gamenthaler A, Choi J, Shibata D.

J Surg Res. 2019 May;237:12-21. doi: 10.1016/j.jss.2018.11.027. Epub 2019 Jan 14.


NP-Scout: Machine Learning Approach for the Quantification and Visualization of the Natural Product-Likeness of Small Molecules.

Chen Y, Stork C, Hirte S, Kirchmair J.

Biomolecules. 2019 Jan 24;9(2). pii: E43. doi: 10.3390/biom9020043.


Simultaneous Determination of Rimsulfuron and Haloxyfop-P-Methyl and Its Metabolite Haloxyfop in Tobacco Leaf by LC-MS/MS.

Yu Y, Zhao S, Yang Y, Chen Y, Qiu D, Ran X, Lu P, Hu D.

J AOAC Int. 2019 Jan 23. doi: 10.5740/jaoacint.18-0280. [Epub ahead of print]


30 W, sub-kHz frequency-locked laser at 532 nm.

Chen HZ, Liu XP, Wang XQ, Wu YP, Wang YX, Yao XC, Chen YA, Pan JW.

Opt Express. 2018 Dec 24;26(26):33756-33763. doi: 10.1364/OE.26.033756.


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