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Context-specific regulation of surface and soluble IL7R expression by an autoimmune risk allele.

Al-Mossawi H, Yager N, Taylor CA, Lau E, Danielli S, de Wit J, Gilchrist J, Nassiri I, Mahe EA, Lee W, Rizvi L, Makino S, Cheeseman J, Neville M, Knight JC, Bowness P, Fairfax BP.

Nat Commun. 2019 Oct 8;10(1):4575. doi: 10.1038/s41467-019-12393-1.


The functional changes of the circadian system organization in aging.

Zhao J, Warman GR, Cheeseman JF.

Ageing Res Rev. 2019 Jul;52:64-71. doi: 10.1016/j.arr.2019.04.006. Epub 2019 Apr 29. Review.


Development of the Molecular Circadian Clock and Its Light Sensitivity in Drosophila Melanogaster.

Zhao J, Warman GR, Stanewsky R, Cheeseman JF.

J Biol Rhythms. 2019 Jun;34(3):272-282. doi: 10.1177/0748730419836818. Epub 2019 Mar 18.


Potential Role for the Gut Microbiota in Modulating Host Circadian Rhythms and Metabolic Health.

Parkar SG, Kalsbeek A, Cheeseman JF.

Microorganisms. 2019 Jan 31;7(2). pii: E41. doi: 10.3390/microorganisms7020041. Review.


Guidance of Navigating Honeybees by Learned Elongated Ground Structures.

Menzel R, Tison L, Fischer-Nakai J, Cheeseman J, Balbuena MS, Chen X, Landgraf T, Petrasch J, Polster J, Greggers U.

Front Behav Neurosci. 2019 Jan 15;12:322. doi: 10.3389/fnbeh.2018.00322. eCollection 2018.


Response to Letter to the Editor: Costs and Radiographic Outcomes of Rotational Ankle Fractures Treated by Orthopaedic Surgeons With or Without Trauma Fellowship Training.

Virkus WW, Wetzel RJ, McKinley TO, Sorkin AT, Cheeseman JS, Hill LC, Kempton LB.

J Am Acad Orthop Surg. 2019 Feb 1;27(3):e143-e145. doi: 10.5435/JAAOS-D-18-00509. No abstract available.


Toll-like receptor activation as a biomarker in traumatically injured patients.

Darrabie MD, Cheeseman J, Limkakeng AT, Borawski J, Sullenger BA, Elster EA, Kirk AD, Lee J.

J Surg Res. 2018 Nov;231:270-277. doi: 10.1016/j.jss.2018.05.059. Epub 2018 Jun 23.


Impact of anaesthesia on circadian rhythms and implications for laboratory experiments.

Orts-Sebastian A, Ludin NM, Pawley MDM, Cheeseman JF, Warman GR.

Exp Neurol. 2019 Jan;311:318-322. doi: 10.1016/j.expneurol.2018.09.017. Epub 2018 Sep 28. Review.


Halophytism: What Have We Learnt From Arabidopsis thaliana Relative Model Systems?

Kazachkova Y, Eshel G, Pantha P, Cheeseman JM, Dassanayake M, Barak S.

Plant Physiol. 2018 Nov;178(3):972-988. doi: 10.1104/pp.18.00863. Epub 2018 Sep 20. Review.


Clock gene expression and locomotor activity predict death in the last days of life in Drosophila melanogaster.

Zhao J, Warman GR, Cheeseman JF.

Sci Rep. 2018 Aug 9;8(1):11923. doi: 10.1038/s41598-018-30323-x.


Expression of Mitochondrial-Encoded Genes in Blood Differentiate Acute Renal Allograft Rejection.

Roedder S, Sigdel T, Hsieh SC, Cheeseman J, Metes D, Macedo C, Reed EF, Gritsch HA, Zeevi A, Shapiro R, Kirk AD, Sarwal MM.

Front Med (Lausanne). 2017 Nov 1;4:185. doi: 10.3389/fmed.2017.00185. eCollection 2017.


Cohort Profile: The Oxford Biobank.

Karpe F, Vasan SK, Humphreys SM, Miller J, Cheeseman J, Dennis AL, Neville MJ.

Int J Epidemiol. 2018 Feb 1;47(1):21-21g. doi: 10.1093/ije/dyx132. No abstract available.


The innate immune cell response to bacterial infection in larval zebrafish is light-regulated.

Du LY, Darroch H, Keerthisinghe P, Ashimbayeva E, Astin JW, Crosier KE, Crosier PS, Warman G, Cheeseman J, Hall CJ.

Sci Rep. 2017 Oct 4;7(1):12657. doi: 10.1038/s41598-017-12842-1.


Polarizable Embedding Approach for the Analytical Calculation of Raman and Raman Optical Activity Spectra of Solvated Systems.

Giovannini T, Olszówka M, Egidi F, Cheeseman JR, Scalmani G, Cappelli C.

J Chem Theory Comput. 2017 Sep 12;13(9):4421-4435. doi: 10.1021/acs.jctc.7b00628. Epub 2017 Aug 18.


Circadian and circatidal clocks control the mechanism of semilunar foraging behaviour.

Cheeseman JF, Fewster RM, Walker MM.

Sci Rep. 2017 Jun 19;7(1):3780. doi: 10.1038/s41598-017-03245-3.


How does general anaesthesia affect the circadian clock?

Poulsen RC, Warman GR, Sleigh J, Ludin NM, Cheeseman JF.

Sleep Med Rev. 2018 Feb;37:35-44. doi: 10.1016/j.smrv.2016.12.002. Epub 2016 Dec 18. Review.


Resolving TYK2 locus genotype-to-phenotype differences in autoimmunity.

Dendrou CA, Cortes A, Shipman L, Evans HG, Attfield KE, Jostins L, Barber T, Kaur G, Kuttikkatte SB, Leach OA, Desel C, Faergeman SL, Cheeseman J, Neville MJ, Sawcer S, Compston A, Johnson AR, Everett C, Bell JI, Karpe F, Ultsch M, Eigenbrot C, McVean G, Fugger L.

Sci Transl Med. 2016 Nov 2;8(363):363ra149.


Changes in Urinary Microbiome Populations Correlate in Kidney Transplants With Interstitial Fibrosis and Tubular Atrophy Documented in Early Surveillance Biopsies.

Modena BD, Milam R, Harrison F, Cheeseman JA, Abecassis MM, Friedewald JJ, Kirk AD, Salomon DR.

Am J Transplant. 2017 Mar;17(3):712-723. doi: 10.1111/ajt.14038. Epub 2016 Oct 11.


Premature T Cell Senescence in Pediatric CKD.

George RP, Mehta AK, Perez SD, Winterberg P, Cheeseman J, Johnson B, Kwun J, Monday S, Stempora L, Warshaw B, Kirk AD.

J Am Soc Nephrol. 2017 Jan;28(1):359-367. doi: 10.1681/ASN.2016010053. Epub 2016 Jul 13.


Dynamic cutaneous information is sufficient for precise curvature discrimination.

Cheeseman JR, Norman JF, Kappers AM.

Sci Rep. 2016 May 3;6:25473. doi: 10.1038/srep25473.


Perceiving Object Shape from Specular Highlight Deformation, Boundary Contour Deformation, and Active Haptic Manipulation.

Norman JF, Phillips F, Cheeseman JR, Thomason KE, Ronning C, Behari K, Kleinman K, Calloway AB, Lamirande D.

PLoS One. 2016 Feb 10;11(2):e0149058. doi: 10.1371/journal.pone.0149058. eCollection 2016.


The effects of the general anaesthetic isoflurane on the honey bee (Apis mellifera) circadian clock.

Ludin NM, Cheeseman JF, Merry AF, Millar CD, Warman GR.

Chronobiol Int. 2016;33(1):128-33. doi: 10.3109/07420528.2015.1113987. Epub 2016 Jan 5.


CD57(+) CD4 T Cells Underlie Belatacept-Resistant Allograft Rejection.

Espinosa J, Herr F, Tharp G, Bosinger S, Song M, Farris AB 3rd, George R, Cheeseman J, Stempora L, Townsend R, Durrbach A, Kirk AD.

Am J Transplant. 2016 Apr;16(4):1102-12. doi: 10.1111/ajt.13613. Epub 2016 Jan 14.


Aging and solid shape recognition: Vision and haptics.

Norman JF, Cheeseman JR, Adkins OC, Cox AG, Rogers CE, Dowell CJ, Baxter MW, Norman HF, Reyes CM.

Vision Res. 2015 Oct;115(Pt A):113-8. doi: 10.1016/j.visres.2015.09.001. Epub 2015 Sep 10.


CMV reactivation drives posttransplant T-cell reconstitution and results in defects in the underlying TCRβ repertoire.

Suessmuth Y, Mukherjee R, Watkins B, Koura DT, Finstermeier K, Desmarais C, Stempora L, Horan JT, Langston A, Qayed M, Khoury HJ, Grizzle A, Cheeseman JA, Conger JA, Robertson J, Garrett A, Kirk AD, Waller EK, Blazar BR, Mehta AK, Robins HS, Kean LS.

Blood. 2015 Jun 18;125(25):3835-50. doi: 10.1182/blood-2015-03-631853. Epub 2015 Apr 7.


Use and Safety of Erythromycin and Metoclopramide in Hospitalized Infants.

Ericson JE, Arnold C, Cheeseman J, Cho J, Kaneko S, Wilson E, Clark RH, Benjamin DK Jr, Chu V, Smith PB, Hornik CP; Best Pharmaceuticals for Children Act–Pediatric Trials Network Administrative Core Committee.

J Pediatr Gastroenterol Nutr. 2015 Sep;61(3):334-9. doi: 10.1097/MPG.0000000000000792.


Absolute configuration of remisporines A & B.

Sherer EC, Cheeseman JR, Williamson RT.

Org Biomol Chem. 2015 Apr 14;13(14):4169-73. doi: 10.1039/c5ob00082c. Epub 2015 Mar 4.


Conformational dynamics of carbohydrates: Raman optical activity of D-glucuronic acid and N-acetyl-D-glucosamine using a combined molecular dynamics and quantum chemical approach.

Mutter ST, Zielinski F, Cheeseman JR, Johannessen C, Popelier PL, Blanch EW.

Phys Chem Chem Phys. 2015 Feb 28;17(8):6016-27. doi: 10.1039/c4cp05517a.


The evolution of halophytes, glycophytes and crops, and its implications for food security under saline conditions.

Cheeseman JM.

New Phytol. 2015 Apr;206(2):557-70. doi: 10.1111/nph.13217. Epub 2014 Dec 15. Review.


The kSORT assay to detect renal transplant patients at high risk for acute rejection: results of the multicenter AART study.

Roedder S, Sigdel T, Salomonis N, Hsieh S, Dai H, Bestard O, Metes D, Zeevi A, Gritsch A, Cheeseman J, Macedo C, Peddy R, Medeiros M, Vincenti F, Asher N, Salvatierra O, Shapiro R, Kirk A, Reed EF, Sarwal MM.

PLoS Med. 2014 Nov 11;11(11):e1001759. doi: 10.1371/journal.pmed.1001759. eCollection 2014 Nov. Erratum in: PLoS Med. 2015 Feb;12(2):e1001790. Zeevi, Andrea [corrected to Zeevi, Adriana]; Reed, Elaine [corrected to Reed, Elaine F].


Multicenter comparison of laboratory performance in cytomegalovirus and Epstein-Barr virus viral load testing using international standards.

Rychert J, Danziger-Isakov L, Yen-Lieberman B, Storch G, Buller R, Sweet SC, Mehta AK, Cheeseman JA, Heeger P, Rosenberg ES, Fishman JA.

Clin Transplant. 2014 Dec;28(12):1416-23. doi: 10.1111/ctr.12473. Epub 2014 Nov 13.


Reply to Cheung et al.: The cognitive map hypothesis remains the best interpretation of the data in honeybee navigation.

Cheeseman JF, Millar CD, Greggers U, Lehmann K, Pawley MD, Gallistel CR, Warman GR, Menzel R.

Proc Natl Acad Sci U S A. 2014 Oct 21;111(42):E4398. doi: 10.1073/pnas.1415738111. Epub 2014 Oct 2. No abstract available.


Way-finding in displaced clock-shifted bees proves bees use a cognitive map.

Cheeseman JF, Millar CD, Greggers U, Lehmann K, Pawley MD, Gallistel CR, Warman GR, Menzel R.

Proc Natl Acad Sci U S A. 2014 Jun 17;111(24):8949-54. doi: 10.1073/pnas.1408039111. Epub 2014 Jun 2.


High CTLA-4 expression on Th17 cells results in increased sensitivity to CTLA-4 coinhibition and resistance to belatacept.

Krummey SM, Cheeseman JA, Conger JA, Jang PS, Mehta AK, Kirk AD, Larsen CP, Ford ML.

Am J Transplant. 2014 Mar;14(3):607-14.


Aging and visual length discrimination: sequential dependencies, biases, and the effects of multiple implicit standards.

Norman JF, Cheeseman JR, Baxter MW, Thomason KE, Adkins OC, Rogers CE.

Vision Res. 2014 May;98:89-98. doi: 10.1016/j.visres.2014.03.011. Epub 2014 Apr 3.


Renal transplantation using belatacept without maintenance steroids or calcineurin inhibitors.

Kirk AD, Guasch A, Xu H, Cheeseman J, Mead SI, Ghali A, Mehta AK, Wu D, Gebel H, Bray R, Horan J, Kean LS, Larsen CP, Pearson TC.

Am J Transplant. 2014 May;14(5):1142-51. doi: 10.1111/ajt.12712. Epub 2014 Mar 31.


The allo- and viral-specific immunosuppressive effect of belatacept, but not tacrolimus, attenuates with progressive T cell maturation.

Xu H, Perez SD, Cheeseman J, Mehta AK, Kirk AD.

Am J Transplant. 2014 Feb;14(2):319-32. doi: 10.1111/ajt.12574.


The effect of age upon the perception of 3-D shape from motion.

Norman JF, Cheeseman JR, Pyles J, Baxter MW, Thomason KE, Calloway AB.

Vision Res. 2013 Dec 18;93:54-61. doi: 10.1016/j.visres.2013.10.012. Epub 2013 Oct 21.


In vivo T cell costimulation blockade with abatacept for acute graft-versus-host disease prevention: a first-in-disease trial.

Koura DT, Horan JT, Langston AA, Qayed M, Mehta A, Khoury HJ, Harvey RD, Suessmuth Y, Couture C, Carr J, Grizzle A, Johnson HR, Cheeseman JA, Conger JA, Robertson J, Stempora L, Johnson BE, Garrett A, Kirk AD, Larsen CP, Waller EK, Kean LS.

Biol Blood Marrow Transplant. 2013 Nov;19(11):1638-49. doi: 10.1016/j.bbmt.2013.09.003. Epub 2013 Sep 15.


Heterologous immunity triggered by a single, latent virus in Mus musculus: combined costimulation- and adhesion- blockade decrease rejection.

Beus JM, Hashmi SS, Selvaraj SA, Duan D, Stempora LL, Monday SA, Cheeseman JA, Hamby KM, Speck SH, Larsen CP, Kirk AD, Kean LS.

PLoS One. 2013 Aug 5;8(8):e71221. doi: 10.1371/journal.pone.0071221. Print 2013.


Brachial arterial temperature as an indicator of core temperature: proof of concept and potential applications.

Pawley MD, Martinsen P, Mitchell SJ, Cheeseman JF, Merry AF, Willcox T, Grieve R, Nand P, Davies E, Warman GR.

J Extra Corpor Technol. 2013 Jun;45(2):86-93.


Aging and curvature discrimination from static and dynamic touch.

Norman JF, Kappers AM, Cheeseman JR, Ronning C, Thomason KE, Baxter MW, Calloway AB, Lamirande DN.

PLoS One. 2013 Jul 2;8(7):e68577. doi: 10.1371/journal.pone.0068577. Print 2013.


Post-transplant lymphoproliferative disorder associated with immunosuppressive therapy for renal transplantation in rhesus macaques (Macaca mulatta).

Page EK, Courtney CL, Sharma P, Cheeseman J, Jenkins JB, Strobert E, Knechtle SJ.

Exp Toxicol Pathol. 2013 Nov;65(7-8):1019-24. doi: 10.1016/j.etp.2013.02.005. Epub 2013 Apr 8.


Solid shape discrimination from vision and haptics: natural objects (Capsicum annuum) and Gibson's "feelies".

Norman JF, Phillips F, Holmin JS, Norman HF, Beers AM, Boswell AM, Cheeseman JR, Stethen AG, Ronning C.

Exp Brain Res. 2012 Oct;222(3):321-32. Epub 2012 Aug 25.


Insights into salt tolerance from the genome of Thellungiella salsuginea.

Wu HJ, Zhang Z, Wang JY, Oh DH, Dassanayake M, Liu B, Huang Q, Sun HX, Xia R, Wu Y, Wang YN, Yang Z, Liu Y, Zhang W, Zhang H, Chu J, Yan C, Fang S, Zhang J, Wang Y, Zhang F, Wang G, Lee SY, Cheeseman JM, Yang B, Li B, Min J, Yang L, Wang J, Chu C, Chen SY, Bohnert HJ, Zhu JK, Wang XJ, Xie Q.

Proc Natl Acad Sci U S A. 2012 Jul 24;109(30):12219-24. doi: 10.1073/pnas.1209954109. Epub 2012 Jul 9.


Aging and the discrimination of 3-D shape from motion and binocular disparity.

Norman JF, Holmin JS, Beers AM, Cheeseman JR, Ronning C, Stethen AG, Frost AL.

Atten Percept Psychophys. 2012 Oct;74(7):1512-21.


General anesthesia alters time perception by phase shifting the circadian clock.

Cheeseman JF, Winnebeck EC, Millar CD, Kirkland LS, Sleigh J, Goodwin M, Pawley MD, Bloch G, Lehmann K, Menzel R, Warman GR.

Proc Natl Acad Sci U S A. 2012 May 1;109(18):7061-6. doi: 10.1073/pnas.1201734109. Epub 2012 Apr 16.


A honey bee (Apis mellifera) light phase response curve.

Ludin NM, Rescan M, Cheeseman JF, Millar CD, Warman GR.

Chronobiol Int. 2012 May;29(4):523-6. doi: 10.3109/07420528.2012.667468. Epub 2012 Apr 5.


Life at the extreme: lessons from the genome.

Oh DH, Dassanayake M, Bohnert HJ, Cheeseman JM.

Genome Biol. 2012;13(3):241. doi: 10.1186/gb-2012-13-3-241. Review.

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