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Items: 1 to 50 of 71

1.

The imbroglio of the physiological Cra effector clarified at last.

Chavarría M, de Lorenzo V.

Mol Microbiol. 2018 Aug;109(3):273-277. doi: 10.1111/mmi.14080. Epub 2018 Aug 7.

PMID:
30019355
2.

Two new cellulolytic fungal species isolated from a 19th-century art collection.

Coronado-Ruiz C, Avendaño R, Escudero-Leyva E, Conejo-Barboza G, Chaverri P, Chavarría M.

Sci Rep. 2018 May 10;8(1):7492. doi: 10.1038/s41598-018-24934-7.

3.

TB or not TB? Mycobacterium celatum mimicking Mycobacterium tuberculosis: A case of mistaken identity.

Chavarria M, Lutwick L, Dickinson BL.

IDCases. 2018 Feb 7;11:83-87. doi: 10.1016/j.idcr.2018.01.015. eCollection 2018.

4.

Increased sensitization to several allergens over a 12-year period in Brazilian children.

Aranda CS, Cocco RR, Pierotti FF, Mallozi MC, Franco JM, Porto A, Goudouris E, Moraes L, Rosário N, Wandalsen NF, Pastorino A, Sarinho E, Sano F, Chavarria ML, Borres MP, Solé D.

Pediatr Allergy Immunol. 2018 May;29(3):321-324. doi: 10.1111/pai.12860. Epub 2018 Jan 25. No abstract available.

PMID:
29314278
5.

Computational flow cytometry analysis reveals a unique immune signature of the human maternal-fetal interface.

Vazquez J, Chavarria M, Li Y, Lopez GE, Stanic AK.

Am J Reprod Immunol. 2018 Jan;79(1). doi: 10.1111/aji.12774. Epub 2017 Oct 14.

PMID:
29030900
6.

Empowering human cardiac progenitor cells by P2Y14 nucleotide receptor overexpression.

Khalafalla FG, Kayani W, Kassab A, Ilves K, Monsanto MM, Alvarez R Jr, Chavarria M, Norman B, Dembitsky WP, Sussman MA.

J Physiol. 2017 Dec 1;595(23):7135-7148. doi: 10.1113/JP274980. Epub 2017 Nov 9.

PMID:
28980705
7.

P2Y2 Nucleotide Receptor Prompts Human Cardiac Progenitor Cell Activation by Modulating Hippo Signaling.

Khalafalla FG, Greene S, Khan H, Ilves K, Monsanto MM, Alvarez R Jr, Chavarria M, Nguyen J, Norman B, Dembitsky WP, Sussman MA.

Circ Res. 2017 Nov 10;121(11):1224-1236. doi: 10.1161/CIRCRESAHA.117.310812. Epub 2017 Sep 18.

PMID:
28923792
8.

High sensitivity field asymmetric ion mobility spectrometer.

Chavarria MA, Matheoud AV, Marmillod P, Liu Y, Kong D, Brugger J, Boero G.

Rev Sci Instrum. 2017 Mar;88(3):035115. doi: 10.1063/1.4978960.

PMID:
28372433
9.

Pristine but metal-rich Río Sucio (Dirty River) is dominated by Gallionella and other iron-sulfur oxidizing microbes.

Arce-Rodríguez A, Puente-Sánchez F, Avendaño R, Libby E, Rojas L, Cambronero JC, Pieper DH, Timmis KN, Chavarría M.

Extremophiles. 2017 Mar;21(2):235-243. doi: 10.1007/s00792-016-0898-7. Epub 2016 Dec 8.

PMID:
27933457
10.

A Metabolic Widget Adjusts the Phosphoenolpyruvate-Dependent Fructose Influx in Pseudomonas putida.

Chavarría M, Goñi-Moreno Á, de Lorenzo V, Nikel PI.

mSystems. 2016 Dec 6;1(6). pii: e00154-16. eCollection 2016 Nov-Dec.

11.

Production of selenium nanoparticles in Pseudomonas putida KT2440.

Avendaño R, Chaves N, Fuentes P, Sánchez E, Jiménez JI, Chavarría M.

Sci Rep. 2016 Nov 15;6:37155. doi: 10.1038/srep37155.

12.

From dirt to industrial applications: Pseudomonas putida as a Synthetic Biology chassis for hosting harsh biochemical reactions.

Nikel PI, Chavarría M, Danchin A, de Lorenzo V.

Curr Opin Chem Biol. 2016 Oct;34:20-29. doi: 10.1016/j.cbpa.2016.05.011. Epub 2016 May 27. Review.

13.

Canine Distemper Virus in Wild Felids of Costa Rica.

Avendaño R, Barrueta F, Soto-Fournier S, Chavarría M, Monge O, Gutiérrez-Espeleta GA, Chaves A.

J Wildl Dis. 2016 Apr 28;52(2):373-7. doi: 10.7589/2015-02-041. Epub 2016 Mar 11.

PMID:
26967127
14.

Pseudomonas putida KT2440 Strain Metabolizes Glucose through a Cycle Formed by Enzymes of the Entner-Doudoroff, Embden-Meyerhof-Parnas, and Pentose Phosphate Pathways.

Nikel PI, Chavarría M, Fuhrer T, Sauer U, de Lorenzo V.

J Biol Chem. 2015 Oct 23;290(43):25920-32. doi: 10.1074/jbc.M115.687749. Epub 2015 Sep 8.

15.

Interplay of the PtsN (EIIA(Ntr)) protein of Pseudomonas putida with its target sensor kinase KdpD.

Deuschle M, Limbrunner S, Rother D, Wahler S, Chavarría M, de Lorenzo V, Kremling A, Pflüger-Grau K.

Environ Microbiol Rep. 2015 Dec;7(6):899-907. doi: 10.1111/1758-2229.12323. Epub 2015 Aug 27.

PMID:
26224366
16.

The two paralogue phoN (phosphinothricin acetyl transferase) genes of Pseudomonas putida encode functionally different proteins.

Páez-Espino AD, Chavarría M, de Lorenzo V.

Environ Microbiol. 2015 Sep;17(9):3330-40. doi: 10.1111/1462-2920.12798. Epub 2015 Apr 8.

PMID:
25684119
17.

Antenatal exposure of maternal secondhand smoke (SHS) increases fetal lung expression of RAGE and induces RAGE-mediated pulmonary inflammation.

Winden DR, Barton DB, Betteridge BC, Bodine JS, Jones CM, Rogers GD, Chavarria M, Wright AJ, Jergensen ZR, Jimenez FR, Reynolds PR.

Respir Res. 2014 Oct 23;15:129. doi: 10.1186/s12931-014-0129-7.

18.

Acute secondhand smoke-induced pulmonary inflammation is diminished in RAGE knockout mice.

Wood TT, Winden DR, Marlor DR, Wright AJ, Jones CM, Chavarria M, Rogers GD, Reynolds PR.

Am J Physiol Lung Cell Mol Physiol. 2014 Nov 15;307(10):L758-64. doi: 10.1152/ajplung.00185.2014. Epub 2014 Sep 26.

19.

Fructose 1-phosphate is the one and only physiological effector of the Cra (FruR) regulator of Pseudomonas putida.

Chavarría M, Durante-Rodríguez G, Krell T, Santiago C, Brezovsky J, Damborsky J, de Lorenzo V.

FEBS Open Bio. 2014 Apr 4;4:377-86. doi: 10.1016/j.fob.2014.03.013. eCollection 2014.

20.

Puberty in the corpus callosum.

Chavarria MC, Sánchez FJ, Chou YY, Thompson PM, Luders E.

Neuroscience. 2014 Apr 18;265:1-8. doi: 10.1016/j.neuroscience.2014.01.030. Epub 2014 Jan 24.

21.

A second chromosomal copy of the catA gene endows Pseudomonas putida mt-2 with an enzymatic safety valve for excess of catechol.

Jiménez JI, Pérez-Pantoja D, Chavarría M, Díaz E, de Lorenzo V.

Environ Microbiol. 2014 Jun;16(6):1767-78. doi: 10.1111/1462-2920.12361. Epub 2014 Jan 21.

22.

The metabolic cost of flagellar motion in Pseudomonas putida KT2440.

Martínez-García E, Nikel PI, Chavarría M, de Lorenzo V.

Environ Microbiol. 2014 Jan;16(1):291-303. doi: 10.1111/1462-2920.12309. Epub 2013 Nov 18.

23.

Scattering of light by colloidal aluminosilicate particles produces the unusual sky-blue color of Río Celeste (Tenorio volcano complex, Costa Rica).

Castellón E, Martínez M, Madrigal-Carballo S, Arias ML, Vargas WE, Chavarría M.

PLoS One. 2013 Sep 18;8(9):e75165. doi: 10.1371/journal.pone.0075165. eCollection 2013.

24.

Endogenous stress caused by faulty oxidation reactions fosters evolution of 2,4-dinitrotoluene-degrading bacteria.

Pérez-Pantoja D, Nikel PI, Chavarría M, de Lorenzo V.

PLoS Genet. 2013 Aug;9(8):e1003764. doi: 10.1371/journal.pgen.1003764. Epub 2013 Aug 29.

25.

Accumulation of inorganic polyphosphate enables stress endurance and catalytic vigour in Pseudomonas putida KT2440.

Nikel PI, Chavarría M, Martínez-García E, Taylor AC, de Lorenzo V.

Microb Cell Fact. 2013 May 20;12:50. doi: 10.1186/1475-2859-12-50.

26.

The Entner-Doudoroff pathway empowers Pseudomonas putida KT2440 with a high tolerance to oxidative stress.

Chavarría M, Nikel PI, Pérez-Pantoja D, de Lorenzo V.

Environ Microbiol. 2013 Jun;15(6):1772-85. doi: 10.1111/1462-2920.12069. Epub 2013 Jan 10.

PMID:
23301697
27.

Modeling and analysis of flux distributions in the two branches of the phosphotransferase system in Pseudomonas putida.

Kremling A, Pflüger-Grau K, Chavarría M, Puchalka J, dos Santos VM, de Lorenzo V.

BMC Syst Biol. 2012 Dec 6;6:149. doi: 10.1186/1752-0509-6-149.

28.

The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes.

Silva-Rocha R, Martínez-García E, Calles B, Chavarría M, Arce-Rodríguez A, de Las Heras A, Páez-Espino AD, Durante-Rodríguez G, Kim J, Nikel PI, Platero R, de Lorenzo V.

Nucleic Acids Res. 2013 Jan;41(Database issue):D666-75. doi: 10.1093/nar/gks1119. Epub 2012 Nov 23.

29.

Cra regulates the cross-talk between the two branches of the phosphoenolpyruvate : phosphotransferase system of Pseudomonas putida.

Chavarría M, Fuhrer T, Sauer U, Pflüger-Grau K, de Lorenzo V.

Environ Microbiol. 2013 Jan;15(1):121-32. doi: 10.1111/j.1462-2920.2012.02808.x. Epub 2012 Jun 19.

PMID:
22708906
30.

The IHF regulon of exponentially growing Pseudomonas putida cells.

Silva-Rocha R, Chavarría M, Kleijn RJ, Sauer U, de Lorenzo V.

Environ Microbiol. 2013 Jan;15(1):49-63. doi: 10.1111/j.1462-2920.2012.02750.x. Epub 2012 Apr 18.

PMID:
22510163
31.

Regulatory tasks of the phosphoenolpyruvate-phosphotransferase system of Pseudomonas putida in central carbon metabolism.

Chavarría M, Kleijn RJ, Sauer U, Pflüger-Grau K, de Lorenzo V.

MBio. 2012 Mar 20;3(2). pii: e00028-12. doi: 10.1128/mBio.00028-12. Print 2012.

32.

Association of dnt genes of Burkholderia sp. DNT with the substrate-blind regulator DntR draws the evolutionary itinerary of 2,4-dinitrotoluene biodegradation.

de Las Heras A, Chavarría M, de Lorenzo V.

Mol Microbiol. 2011 Oct;82(2):287-99. doi: 10.1111/j.1365-2958.2011.07825.x. Epub 2011 Sep 29.

33.

Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida.

Chavarría M, Santiago C, Platero R, Krell T, Casasnovas JM, de Lorenzo V.

J Biol Chem. 2011 Mar 18;286(11):9351-9. doi: 10.1074/jbc.M110.187583. Epub 2011 Jan 14.

34.

The interplay of the EIIA(Ntr) component of the nitrogen-related phosphotransferase system (PTS(Ntr)) of Pseudomonas putida with pyruvate dehydrogenase.

Pflüger-Grau K, Chavarría M, de Lorenzo V.

Biochim Biophys Acta. 2011 Oct;1810(10):995-1005. doi: 10.1016/j.bbagen.2011.01.002. Epub 2011 Jan 12.

PMID:
21236318
35.

An electro-optical device from a biofilm structure created by bacterial activity.

Castellón E, Chavarría M, de Lorenzo V, Zayat M, Levy D.

Adv Mater. 2010 Nov 16;22(43):4846-50. doi: 10.1002/adma.201001986. No abstract available.

PMID:
20717993
36.

Futura study: evaluation of efficacy and safety of rupatadine fumarate in the treatment of persistent allergic rhinitis.

Mion Ode G, Campos RA, Antila M, Rapoport PB, Rosario N, de Mello Junior JF, Guimarães RE, Mocellin M, Di Gesu G, Solé D, Wexler L, de Mello JF, Castro FM, Chavarria ML.

Braz J Otorhinolaryngol. 2009 Sep-Oct;75(5):673-9.

37.

[Four new compounds from the non-polar extract of the plant Amyris brenesii (Rutaceae) from Costa Rica].

Chavarría M, Castro V, Poveda L, Renato M.

Rev Biol Trop. 2008 Sep;56(3):1043-51. Spanish.

PMID:
19419026
38.

Advances in hematologic stem cell transplant: an update for oral health care providers.

Epstein JB, Raber-Durlacher JE, Wilkins A, Chavarria MG, Myint H.

Oral Surg Oral Med Oral Pathol Oral Radiol Endod. 2009 Mar;107(3):301-12. doi: 10.1016/j.tripleo.2008.12.006. Erratum in: Oral Surg Oral Med Oral Pathol Oral Radiol Endod. 2011 Sep;112(3):412. Raber-Drulacher, Judith E [corrected to Raber-Durlacher, Judith E].

PMID:
19217013
39.

Microbial degradation of palm (Elaeis guineensis) biodiesel.

Lutz G, Chavarría M, Arias ML, Mata-Segreda JF.

Rev Biol Trop. 2006 Mar;54(1):59-63.

PMID:
18457175
40.

Activation of the interleukin-6/STAT3 antiapoptotic pathway in esophageal cells by bile acids and low pH: relevance to barrett's esophagus.

Dvorak K, Chavarria M, Payne CM, Ramsey L, Crowley-Weber C, Dvorakova B, Dvorak B, Bernstein H, Holubec H, Sampliner RE, Bernstein C, Prasad A, Green SB, Garewal H.

Clin Cancer Res. 2007 Sep 15;13(18 Pt 1):5305-13.

41.

Adhesion molecules changes at 20 gestation weeks in pregnancies complicated by preeclampsia.

Chavarría ME, Lara-González L, García-Paleta Y, Vital-Reyes VS, Reyes A.

Eur J Obstet Gynecol Reprod Biol. 2008 Apr;137(2):157-64. Epub 2007 Aug 13.

PMID:
17706337
42.

Bile acids in combination with low pH induce oxidative stress and oxidative DNA damage: relevance to the pathogenesis of Barrett's oesophagus.

Dvorak K, Payne CM, Chavarria M, Ramsey L, Dvorakova B, Bernstein H, Holubec H, Sampliner RE, Guy N, Condon A, Bernstein C, Green SB, Prasad A, Garewal HS.

Gut. 2007 Jun;56(6):763-71. Epub 2006 Dec 4.

43.

Esophageal acid exposure at pH < or = 2 is more common in Barrett's esophagus patients and is associated with oxidative stress.

Dvorak K, Fass R, Dekel R, Payne CM, Chavarria M, Dvorakova B, Bernstein H, Bernstein C, Garewal H.

Dis Esophagus. 2006;19(5):366-72.

PMID:
16984534
44.

Apoptosis resistance in Barrett's esophagus: ex vivo bioassay of live stressed tissues.

Dvorakova K, Payne CM, Ramsey L, Bernstein H, Holubec H, Chavarria M, Bernstein C, Sampliner RE, Riley C, Prasad A, Garewal H.

Am J Gastroenterol. 2005 Feb;100(2):424-31.

PMID:
15667503
45.

[Phadiatop in the diagnosis of respiratory allergy in children: Allergy Project--PROAL].

Naspitz CK, Solé D, Aguiar MC, Chavarria ML, Rosário Filho N, Zuliani A, Toledo EC, Barreto BA, Souza LS; Grupo PROAL.

J Pediatr (Rio J). 2004 May-Jun;80(3):217-22. Portuguese.

46.

Prostacyclin/thromboxane early changes in pregnancies that are complicated by preeclampsia.

Chavarría ME, Lara-González L, González-Gleason A, García-Paleta Y, Vital-Reyes VS, Reyes A.

Am J Obstet Gynecol. 2003 Apr;188(4):986-92.

PMID:
12712098
47.

Maternal plasma cellular fibronectin concentrations in normal and preeclamptic pregnancies: a longitudinal study for early prediction of preeclampsia.

Chavarría ME, Lara-González L, González-Gleason A, Sojo I, Reyes A.

Am J Obstet Gynecol. 2002 Sep;187(3):595-601.

PMID:
12237633
48.

Asymmetric calmodulin distribution in the hypothalamus: role of sexual differentiation in the rat.

Rodríguez-Medina MA, Reyes A, Chavarría ME, Vergara-Onofre M, Canchola E, Rosado A.

Pharmacol Biochem Behav. 2002 May;72(1-2):189-95.

PMID:
11900787
49.

Effect of bafilomycin A1, a specific inhibitor of vacuolar (V-type) proton ATPases, on the capacitation of rabbit spermatozoa.

García-MacEdo R, Rosales AM, Hernández-Pérez O, Chavarría ME, Reyes A, Rosado A.

Andrologia. 2001 Mar;33(2):113-21.

PMID:
11350375
50.

Changes in hypothalamic calmodulin concentration induced by perinatal hormone manipulation in the rat.

Rodríguez-Medina MA, Vergara M, Chavarria ME, Rosado A, Reyes A.

Pharmacol Biochem Behav. 1998 Dec;61(4):445-50.

PMID:
9802840

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