Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 66


Diversity and coexistence are influenced by time-dependent species interactions in a predator-prey system.

Karakoç C, Clark AT, Chatzinotas A.

Ecol Lett. 2020 Apr 3. doi: 10.1111/ele.13500. [Epub ahead of print]


Mycelial Effects on Phage Retention during Transport in a Microfluidic Platform.

Ghanem N, Stanley CE, Harms H, Chatzinotas A, Wick LY.

Environ Sci Technol. 2019 Oct 15;53(20):11755-11763. doi: 10.1021/acs.est.9b03502. Epub 2019 Sep 30.


Temperature and stoichiometric dependence of phytoplankton traits.

Hofmann P, Chatzinotas A, Harpole WS, Dunker S.

Ecology. 2019 Dec;100(12):e02875. doi: 10.1002/ecy.2875. Epub 2019 Oct 18.


Ecological Functions of Agricultural Soil Bacteria and Microeukaryotes in Chitin Degradation: A Case Study.

Wieczorek AS, Schmidt O, Chatzinotas A, von Bergen M, Gorissen A, Kolb S.

Front Microbiol. 2019 Jun 20;10:1293. doi: 10.3389/fmicb.2019.01293. eCollection 2019.


Drought modulates interactions between arbuscular mycorrhizal fungal diversity and barley genotype diversity.

Sendek A, Karakoç C, Wagg C, Domínguez-Begines J, do Couto GM, van der Heijden MGA, Naz AA, Lochner A, Chatzinotas A, Klotz S, Gómez-Aparicio L, Eisenhauer N.

Sci Rep. 2019 Jul 4;9(1):9650. doi: 10.1038/s41598-019-45702-1.


Evaluation of Sequencing Library Preparation Protocols for Viral Metagenomic Analysis from Pristine Aquifer Groundwaters.

Kallies R, Hölzer M, Brizola Toscan R, Nunes da Rocha U, Anders J, Marz M, Chatzinotas A.

Viruses. 2019 May 28;11(6). pii: E484. doi: 10.3390/v11060484.


Bacteria and microeukaryotes are differentially segregated in sympatric wastewater microhabitats.

Cohen Y, Pasternak Z, Johnke J, Abed-Rabbo A, Kushmaro A, Chatzinotas A, Jurkevitch E.

Environ Microbiol. 2019 May;21(5):1757-1770. doi: 10.1111/1462-2920.14548. Epub 2019 Mar 21.


Molecular quantification and differentiation of Candida species in biological specimens of patients with liver cirrhosis.

Krohn S, Zeller K, Böhm S, Chatzinotas A, Harms H, Hartmann J, Heidtmann A, Herber A, Kaiser T, Treuheit M, Hoffmeister A, Berg T, Engelmann C.

PLoS One. 2018 Jun 13;13(6):e0197319. doi: 10.1371/journal.pone.0197319. eCollection 2018.


Rhizosphere Protists Change Metabolite Profiles in Zea mays.

Kuppardt A, Fester T, Härtig C, Chatzinotas A.

Front Microbiol. 2018 May 3;9:857. doi: 10.3389/fmicb.2018.00857. eCollection 2018.


Different Recovery Processes of Soil Ammonia Oxidizers from Flooding Disturbance.

Ye F, Ma MH, Op den Camp HJM, Chatzinotas A, Li L, Lv MQ, Wu SJ, Wang Y.

Microb Ecol. 2018 Nov;76(4):1041-1052. doi: 10.1007/s00248-018-1183-3. Epub 2018 Apr 11.


Changes of the Specific Infectivity of Tracer Phages during Transport in Porous Media.

Ghanem N, Trost M, Sánchez Fontanet L, Harms H, Chatzinotas A, Wick LY.

Environ Sci Technol. 2018 Mar 20;52(6):3486-3492. doi: 10.1021/acs.est.7b06271. Epub 2018 Mar 9.


Interactions between predation and disturbances shape prey communities.

Karakoç C, Radchuk V, Harms H, Chatzinotas A.

Sci Rep. 2018 Feb 14;8(1):2968. doi: 10.1038/s41598-018-21219-x.


People, pollution and pathogens - Global change impacts in mountain freshwater ecosystems.

Schmeller DS, Loyau A, Bao K, Brack W, Chatzinotas A, De Vleeschouwer F, Friesen J, Gandois L, Hansson SV, Haver M, Le Roux G, Shen J, Teisserenc R, Vredenburg VT.

Sci Total Environ. 2018 May 1;622-623:756-763. doi: 10.1016/j.scitotenv.2017.12.006. Epub 2017 Dec 13. Review.


Complete Genome Sequence of Alteromonas Virus vB_AspP-H4/4.

Kallies R, Kiesel B, Zopfi J, Wick LY, Chatzinotas A.

Genome Announc. 2017 Oct 26;5(43). pii: e00914-17. doi: 10.1128/genomeA.00914-17.


Soil Viral Communities Vary Temporally and along a Land Use Transect as Revealed by Virus-Like Particle Counting and a Modified Community Fingerprinting Approach (fRAPD).

Narr A, Nawaz A, Wick LY, Harms H, Chatzinotas A.

Front Microbiol. 2017 Oct 10;8:1975. doi: 10.3389/fmicb.2017.01975. eCollection 2017.


Root exudate cocktails: the link between plant diversity and soil microorganisms?

Steinauer K, Chatzinotas A, Eisenhauer N.

Ecol Evol. 2016 Sep 23;6(20):7387-7396. doi: 10.1002/ece3.2454. eCollection 2016 Oct.


Killing the killer: predation between protists and predatory bacteria.

Johnke J, Boenigk J, Harms H, Chatzinotas A.

FEMS Microbiol Lett. 2017 May 1;364(9). doi: 10.1093/femsle/fnx089.


Transient recovery dynamics of a predator-prey system under press and pulse disturbances.

Karakoç C, Singer A, Johst K, Harms H, Chatzinotas A.

BMC Ecol. 2017 Apr 4;17(1):13. doi: 10.1186/s12898-017-0123-2.


Complete genome sequence of Pseudoalteromonas phage vB_PspS-H40/1 (formerly H40/1) that infects Pseudoalteromonas sp. strain H40 and is used as biological tracer in hydrological transport studies.

Kallies R, Kiesel B, Schmidt M, Kacza J, Ghanem N, Narr A, Zopfi J, Wick LY, Hackermüller J, Harms H, Chatzinotas A.

Stand Genomic Sci. 2017 Feb 2;12:20. doi: 10.1186/s40793-017-0235-5. eCollection 2017.


Isolation of a bacterial consortium able to degrade the fungicide thiabendazole: the key role of a Sphingomonas phylotype.

Perruchon C, Chatzinotas A, Omirou M, Vasileiadis S, Menkissoglou-Spiroudi U, Karpouzas DG.

Appl Microbiol Biotechnol. 2017 May;101(9):3881-3893. doi: 10.1007/s00253-017-8128-5. Epub 2017 Feb 2.


Where less may be more: how the rare biosphere pulls ecosystems strings.

Jousset A, Bienhold C, Chatzinotas A, Gallien L, Gobet A, Kurm V, Küsel K, Rillig MC, Rivett DW, Salles JF, van der Heijden MG, Youssef NH, Zhang X, Wei Z, Hol WH.

ISME J. 2017 Apr;11(4):853-862. doi: 10.1038/ismej.2016.174. Epub 2017 Jan 10.


Trade-off between taxon diversity and functional diversity in European lake ecosystems.

Grossmann L, Beisser D, Bock C, Chatzinotas A, Jensen M, Preisfeld A, Psenner R, Rahmann S, Wodniok S, Boenigk J.

Mol Ecol. 2016 Dec;25(23):5876-5888. doi: 10.1111/mec.13878. Epub 2016 Nov 14.


Marine Phages As Tracers: Effects of Size, Morphology, and Physico-Chemical Surface Properties on Transport in a Porous Medium.

Ghanem N, Kiesel B, Kallies R, Harms H, Chatzinotas A, Wick LY.

Environ Sci Technol. 2016 Dec 6;50(23):12816-12824. Epub 2016 Oct 24.


Trophic complexity in aqueous systems: bacterial species richness and protistan predation regulate dissolved organic carbon and dissolved total nitrogen removal.

Saleem M, Fetzer I, Harms H, Chatzinotas A.

Proc Biol Sci. 2016 Feb 24;283(1825):20152724. doi: 10.1098/rspb.2015.2724.


Kombucha tea fermentation: Microbial and biochemical dynamics.

Chakravorty S, Bhattacharya S, Chatzinotas A, Chakraborty W, Bhattacharya D, Gachhui R.

Int J Food Microbiol. 2016 Mar 2;220:63-72. doi: 10.1016/j.ijfoodmicro.2015.12.015. Epub 2016 Jan 7.


The extent of functional redundancy changes as species' roles shift in different environments.

Fetzer I, Johst K, Schäwe R, Banitz T, Harms H, Chatzinotas A.

Proc Natl Acad Sci U S A. 2015 Dec 1;112(48):14888-93. doi: 10.1073/pnas.1505587112. Epub 2015 Nov 17.


The influence of environmental factors on protistan microorganisms in grassland soils along a land-use gradient.

Glaser K, Kuppardt A, Boenigk J, Harms H, Fetzer I, Chatzinotas A.

Sci Total Environ. 2015 Dec 15;537:33-42. doi: 10.1016/j.scitotenv.2015.07.158. Epub 2015 Aug 14.


Effects of long-term differential fertilization on eukaryotic microbial communities in an arable soil: a multiple barcoding approach.

Lentendu G, Wubet T, Chatzinotas A, Wilhelm C, Buscot F, Schlegel M.

Mol Ecol. 2014 Jul;23(13):3341-55. doi: 10.1111/mec.12819.


Phylogenetic and functional diversity within toluene-degrading, sulphate-reducing consortia enriched from a contaminated aquifer.

Kuppardt A, Kleinsteuber S, Vogt C, Lüders T, Harms H, Chatzinotas A.

Microb Ecol. 2014 Aug;68(2):222-34. doi: 10.1007/s00248-014-0403-8. Epub 2014 Mar 13.


Application of qualitative and quantitative real-time PCR, direct sequencing, and terminal restriction fragment length polymorphism analysis for detection and identification of polymicrobial 16S rRNA genes in ascites.

Krohn S, Böhm S, Engelmann C, Hartmann J, Brodzinski A, Chatzinotas A, Zeller K, Prywerek D, Fetzer I, Berg T.

J Clin Microbiol. 2014 May;52(5):1754-7. doi: 10.1128/JCM.00552-14. Epub 2014 Mar 12.


Multiple micro-predators controlling bacterial communities in the environment.

Johnke J, Cohen Y, de Leeuw M, Kushmaro A, Jurkevitch E, Chatzinotas A.

Curr Opin Biotechnol. 2014 Jun;27:185-90. doi: 10.1016/j.copbio.2014.02.003. Epub 2014 Mar 2. Review.


Primer pairs for the specific environmental detection and T-RFLP analysis of the ubiquitous flagellate taxa Chrysophyceae and Kinetoplastea.

Glaser K, Kuppardt A, Krohn S, Heidtmann A, Harms H, Chatzinotas A.

J Microbiol Methods. 2014 May;100:8-16. doi: 10.1016/j.mimet.2014.02.006. Epub 2014 Feb 16.


Interannual variation in land-use intensity enhances grassland multidiversity.

Allan E, Bossdorf O, Dormann CF, Prati D, Gossner MM, Tscharntke T, Blüthgen N, Bellach M, Birkhofer K, Boch S, Böhm S, Börschig C, Chatzinotas A, Christ S, Daniel R, Diekötter T, Fischer C, Friedl T, Glaser K, Hallmann C, Hodac L, Hölzel N, Jung K, Klein AM, Klaus VH, Kleinebecker T, Krauss J, Lange M, Morris EK, Müller J, Nacke H, Pasalic E, Rillig MC, Rothenwöhrer C, Schall P, Scherber C, Schulze W, Socher SA, Steckel J, Steffan-Dewenter I, Türke M, Weiner CN, Werner M, Westphal C, Wolters V, Wubet T, Gockel S, Gorke M, Hemp A, Renner SC, Schöning I, Pfeiffer S, König-Ries B, Buscot F, Linsenmair KE, Schulze ED, Weisser WW, Fischer M.

Proc Natl Acad Sci U S A. 2014 Jan 7;111(1):308-13. doi: 10.1073/pnas.1312213111. Epub 2013 Dec 24.


Assimilation of cellulose-derived carbon by microeukaryotes in oxic and anoxic slurries of an aerated soil.

Chatzinotas A, Schellenberger S, Glaser K, Kolb S.

Appl Environ Microbiol. 2013 Sep;79(18):5777-81. doi: 10.1128/AEM.01598-13. Epub 2013 Jul 12.


Diversity of protists and bacteria determines predation performance and stability.

Saleem M, Fetzer I, Harms H, Chatzinotas A.

ISME J. 2013 Oct;7(10):1912-21. doi: 10.1038/ismej.2013.95. Epub 2013 Jun 13.


Evaluating the assignment of alkB terminal restriction fragments and sequence types to distinct bacterial taxa.

Giebler J, Wick LY, Schloter M, Harms H, Chatzinotas A.

Appl Environ Microbiol. 2013 May;79(9):3129-32. doi: 10.1128/AEM.04028-12. Epub 2013 Mar 1.


Alkane-degrading bacteria at the soil-litter interface: comparing isolates with T-RFLP-based community profiles.

Giebler J, Wick LY, Chatzinotas A, Harms H.

FEMS Microbiol Ecol. 2013 Oct;86(1):45-58. doi: 10.1111/1574-6941.12097. Epub 2013 Mar 11.


Predator richness increases the effect of prey diversity on prey yield.

Saleem M, Fetzer I, Dormann CF, Harms H, Chatzinotas A.

Nat Commun. 2012;3:1305. doi: 10.1038/ncomms2287.


Plant litter and soil type drive abundance, activity and community structure of alkB harbouring microbes in different soil compartments.

Schulz S, Giebler J, Chatzinotas A, Wick LY, Fetzer I, Welzl G, Harms H, Schloter M.

ISME J. 2012 Sep;6(9):1763-74. doi: 10.1038/ismej.2012.17. Epub 2012 Mar 8.


Field testing of arsenic in groundwater samples of Bangladesh using a test kit based on lyophilized bioreporter bacteria.

Siegfried K, Endes C, Bhuiyan AF, Kuppardt A, Mattusch J, van der Meer JR, Chatzinotas A, Harms H.

Environ Sci Technol. 2012 Mar 20;46(6):3281-7. doi: 10.1021/es203511k. Epub 2012 Feb 28.


Use of mycelia as paths for the isolation of contaminant-degrading bacteria from soil.

Furuno S, Remer R, Chatzinotas A, Harms H, Wick LY.

Microb Biotechnol. 2012 Jan;5(1):142-8. doi: 10.1111/j.1751-7915.2011.00309.x. Epub 2011 Oct 20.


Evaluation of FT-IR spectroscopy as a tool to quantify bacteria in binary mixed cultures.

Schäwe R, Fetzer I, Tönniges A, Härtig C, Geyer W, Harms H, Chatzinotas A.

J Microbiol Methods. 2011 Aug;86(2):182-7. doi: 10.1016/j.mimet.2011.05.001. Epub 2011 May 9.


Development of a fatty acid and RNA stable isotope probing-based method for tracking protist grazing on bacteria in wastewater.

Kuppardt S, Chatzinotas A, Kästner M.

Appl Environ Microbiol. 2010 Dec;76(24):8222-30. doi: 10.1128/AEM.01632-10. Epub 2010 Oct 29.


Short-term disturbance of a grazer has long-term effects on bacterial communities--relevance of trophic interactions for recovery from pesticide effects.

Foit K, Chatzinotas A, Liess M.

Aquat Toxicol. 2010 Aug 15;99(2):205-11. doi: 10.1016/j.aquatox.2010.04.019. Epub 2010 May 2.


Enrichment and characterization of a sulfate-reducing toluene-degrading microbial consortium by combining in situ microcosms and stable isotope probing techniques.

Bombach P, Chatzinotas A, Neu TR, Kästner M, Lueders T, Vogt C.

FEMS Microbiol Ecol. 2010 Feb;71(2):237-46. doi: 10.1111/j.1574-6941.2009.00809.x. Epub 2009 Nov 26.


Application of the denaturing gradient gel electrophoresis (DGGE) technique as an efficient diagnostic tool for ciliate communities in soil.

Jousset A, Lara E, Nikolausz M, Harms H, Chatzinotas A.

Sci Total Environ. 2010 Feb 1;408(5):1221-5. doi: 10.1016/j.scitotenv.2009.09.056. Epub 2009 Nov 6.


Functional characterization of an anaerobic benzene-degrading enrichment culture by DNA stable isotope probing.

Herrmann S, Kleinsteuber S, Chatzinotas A, Kuppardt S, Lueders T, Richnow HH, Vogt C.

Environ Microbiol. 2010 Feb;12(2):401-11. doi: 10.1111/j.1462-2920.2009.02077.x. Epub 2009 Oct 16. Erratum in: Environ Microbiol. 2011 Feb;13(2):550.


Genetic diversity of eukaryotic plankton assemblages in Eastern Tibetan Lakes differing by their salinity and altitude.

Wu QL, Chatzinotas A, Wang J, Boenigk J.

Microb Ecol. 2009 Oct;58(3):569-81. doi: 10.1007/s00248-009-9526-8. Epub 2009 May 16.


The single-nucleotide primer extension (SNuPE) method for the multiplex detection of various DNA sequences: from detection of point mutations to microbial ecology.

Nikolausz M, Chatzinotas A, Táncsics A, Imfeld G, Kästner M.

Biochem Soc Trans. 2009 Apr;37(Pt 2):454-9. doi: 10.1042/BST0370454. Review.


Evaluation of single-nucleotide primer extension for detection and typing of phylogenetic markers used for investigation of microbial communities.

Nikolausz M, Chatzinotas A, Táncsics A, Imfeld G, Kästner M.

Appl Environ Microbiol. 2009 May;75(9):2850-60. doi: 10.1128/AEM.01910-08. Epub 2009 Feb 27.

Supplemental Content

Loading ...
Support Center