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A cross-sectional survey of practices and knowledge among antibiotic retailers in Nairobi, Kenya.

Muloi D, Fèvre EM, Bettridge J, Rono R, Ong'are D, Hassell JM, Karani MK, Muinde P, van Bunnik B, Street A, Chase-Topping M, Pedersen AB, Ward MJ, Woolhouse M.

J Glob Health. 2019 Dec;9(2):010412. doi: 10.7189/jogh.09.020412.


Epidemiology of antimicrobial-resistant Escherichia coli carriage in sympatric humans and livestock in a rapidly urbanizing city.

Muloi D, Kiiru J, Ward MJ, Hassell JM, Bettridge JM, Robinson TP, van Bunnik BAD, Chase-Topping M, Robertson G, Pedersen AB, Fèvre EM, Woolhouse MEJ, Kang'ethe EK, Kariuki S.

Int J Antimicrob Agents. 2019 Nov;54(5):531-537. doi: 10.1016/j.ijantimicag.2019.08.014. Epub 2019 Aug 19.


Evidence of a distinct group of Black African patients with systemic lupus erythematosus.

Sibanda EN, Chase-Topping M, Pfavayi LT, Woolhouse MEJ, Mutapi F.

BMJ Glob Health. 2018 Sep 16;3(5):e000697. doi: 10.1136/bmjgh-2017-000697. eCollection 2018.


Dynamics of paediatric urogenital schistosome infection, morbidity and treatment: a longitudinal study among preschool children in Zimbabwe.

Osakunor DNM, Mduluza T, Midzi N, Chase-Topping M, Mutsaka-Makuvaza MJ, Chimponda T, Eyoh E, Mduluza T, Pfavayi LT, Wami WM, Amanfo SA, Murray J, Tshuma C, Woolhouse MEJ, Mutapi F.

BMJ Glob Health. 2018 Mar 27;3(2):e000661. doi: 10.1136/bmjgh-2017-000661. eCollection 2018.


British Escherichia coli O157 in Cattle Study (BECS): to determine the prevalence of E. coli O157 in herds with cattle destined for the food chain.

Henry MK, Tongue SC, Evans J, Webster C, McKENDRICK IJ, Morgan M, Willett A, Reeves A, Humphry RW, Gally DL, Gunn GJ, Chase-Topping ME.

Epidemiol Infect. 2017 Nov;145(15):3168-3179. doi: 10.1017/S0950268817002151. Epub 2017 Sep 19.


Vulnerability of the British swine industry to classical swine fever.

Porphyre T, Correia-Gomes C, Chase-Topping ME, Gamado K, Auty HK, Hutchinson I, Reeves A, Gunn GJ, Woolhouse ME.

Sci Rep. 2017 Feb 22;7:42992. doi: 10.1038/srep42992.


Distinct immune responses and virus shedding in pigs following aerosol, intra-nasal and contact infection with pandemic swine influenza A virus, A(H1N1)09.

Hemmink JD, Morgan SB, Aramouni M, Everett H, Salguero FJ, Canini L, Porter E, Chase-Topping M, Beck K, Loughlin RM, Carr BV, Brown IH, Bailey M, Woolhouse M, Brookes SM, Charleston B, Tchilian E.

Vet Res. 2016 Oct 20;47(1):103.


The Importance of Socio-Economic Versus Environmental Risk Factors for Reported Dengue Cases in Java, Indonesia.

Wijayanti SP, Porphyre T, Chase-Topping M, Rainey SM, McFarlane M, Schnettler E, Biek R, Kohl A.

PLoS Negl Trop Dis. 2016 Sep 7;10(9):e0004964. doi: 10.1371/journal.pntd.0004964. eCollection 2016 Sep.


Phylogenomic approaches to determine the zoonotic potential of Shiga toxin-producing Escherichia coli (STEC) isolated from Zambian dairy cattle.

Mainda G, Lupolova N, Sikakwa L, Bessell PR, Muma JB, Hoyle DV, McAteer SP, Gibbs K, Williams NJ, Sheppard SK, La Ragione RM, Cordoni G, Argyle SA, Wagner S, Chase-Topping ME, Dallman TJ, Stevens MP, Bronsvoort BM, Gally DL.

Sci Rep. 2016 May 25;6:26589. doi: 10.1038/srep26589.


Not just a matter of size: a hospital-level risk factor analysis of MRSA bacteraemia in Scotland.

Gibbons CL, van Bunnik BAD, Blatchford O, Robertson C, Porphyre T, Imrie L, Wilson J, Fitzgerald JR, Woolhouse MEJ, Chase-Topping ME.

BMC Infect Dis. 2016 May 21;16:222. doi: 10.1186/s12879-016-1563-6.


Co-infections determine patterns of mortality in a population exposed to parasite infection.

Woolhouse ME, Thumbi SM, Jennings A, Chase-Topping M, Callaby R, Kiara H, Oosthuizen MC, Mbole-Kariuki MN, Conradie I, Handel IG, Poole EJ, Njiiri E, Collins NE, Murray G, Tapio M, Auguet OT, Weir W, Morrison WI, Kruuk LE, Bronsvoort BM, Hanotte O, Coetzer K, Toye PG.

Sci Adv. 2015 Mar 20;1(2):e1400026. doi: 10.1126/sciadv.1400026. eCollection 2015 Mar.


Erratum: Prevalence and patterns of antimicrobial resistance among Escherichia coli isolated from Zambian dairy cattle across different production systems.

Mainda G, Bessell PR, Muma JB, McAteer SP, Chase-Topping ME, Gibbons J, Stevens MP, Gally DL, deC Bronsvoort BM.

Sci Rep. 2015 Sep 21;5:14162. doi: 10.1038/srep14162. No abstract available.


Applying phylogenomics to understand the emergence of Shiga-toxin-producing Escherichia coli O157:H7 strains causing severe human disease in the UK.

Dallman TJ, Ashton PM, Byrne L, Perry NT, Petrovska L, Ellis R, Allison L, Hanson M, Holmes A, Gunn GJ, Chase-Topping ME, Woolhouse MEJ, Grant KA, Gally DL, Wain J, Jenkins C.

Microb Genom. 2015 Sep 14;1(3):e000029. doi: 10.1099/mgen.0.000029. eCollection 2015 Sep.


Prevalence and patterns of antimicrobial resistance among Escherichia coli isolated from Zambian dairy cattle across different production systems.

Mainda G, Bessell PR, Muma JB, McAteer SP, Chase-Topping ME, Gibbons J, Stevens MP, Gally DL, deC Bronsvoort BM.

Sci Rep. 2015 Jul 27;5:12439. doi: 10.1038/srep12439. Erratum in: Sci Rep. 2015;5:14162. Bessell, Paul B [corrected to Bessell, Paul R].


Analysis of whole genome sequencing for the Escherichia coli O157:H7 typing phages.

Cowley LA, Beckett SJ, Chase-Topping M, Perry N, Dallman TJ, Gally DL, Jenkins C.

BMC Genomics. 2015 Apr 8;16:271. doi: 10.1186/s12864-015-1470-z.


The feasibility of testing whether Fasciola hepatica is associated with increased risk of verocytotoxin producing Escherichia coli O157 from an existing study protocol.

Hickey GL, Diggle PJ, McNeilly TN, Tongue SC, Chase-Topping ME, Williams DJ.

Prev Vet Med. 2015 May 1;119(3-4):97-104. doi: 10.1016/j.prevetmed.2015.02.022. Epub 2015 Mar 1. Erratum in: Prev Vet Med. 2015 Sep 1;121(1-2):188.


Induction and suppression of tick cell antiviral RNAi responses by tick-borne flaviviruses.

Schnettler E, Tykalová H, Watson M, Sharma M, Sterken MG, Obbard DJ, Lewis SH, McFarlane M, Bell-Sakyi L, Barry G, Weisheit S, Best SM, Kuhn RJ, Pijlman GP, Chase-Topping ME, Gould EA, Grubhoffer L, Fazakerley JK, Kohl A.

Nucleic Acids Res. 2014 Aug;42(14):9436-46. doi: 10.1093/nar/gku657. Epub 2014 Jul 22.


E. coli O157 on Scottish cattle farms: evidence of local spread and persistence using repeat cross-sectional data.

Herbert LJ, Vali L, Hoyle DV, Innocent G, McKendrick IJ, Pearce MC, Mellor D, Porphyre T, Locking M, Allison L, Hanson M, Matthews L, Gunn GJ, Woolhouse ME, Chase-Topping ME.

BMC Vet Res. 2014 Apr 26;10:95. doi: 10.1186/1746-6148-10-95.


Genetic susceptibility to infectious disease in East African Shorthorn Zebu: a genome-wide analysis of the effect of heterozygosity and exotic introgression.

Murray GG, Woolhouse ME, Tapio M, Mbole-Kariuki MN, Sonstegard TS, Thumbi SM, Jennings AE, van Wyk IC, Chase-Topping M, Kiara H, Toye P, Coetzer K, deC Bronsvoort BM, Hanotte O.

BMC Evol Biol. 2013 Nov 9;13:246. doi: 10.1186/1471-2148-13-246.


Predicting the public health benefit of vaccinating cattle against Escherichia coli O157.

Matthews L, Reeve R, Gally DL, Low JC, Woolhouse ME, McAteer SP, Locking ME, Chase-Topping ME, Haydon DT, Allison LJ, Hanson MF, Gunn GJ, Reid SW.

Proc Natl Acad Sci U S A. 2013 Oct 1;110(40):16265-70. doi: 10.1073/pnas.1304978110. Epub 2013 Sep 16.


Understanding foot-and-mouth disease virus transmission biology: identification of the indicators of infectiousness.

Chase-Topping ME, Handel I, Bankowski BM, Juleff ND, Gibson D, Cox SJ, Windsor MA, Reid E, Doel C, Howey R, Barnett PV, Woolhouse ME, Charleston B.

Vet Res. 2013 Jul 3;44:46. doi: 10.1186/1297-9716-44-46.


Factors affecting the perception of recovery quality in horses after anaesthesia.

Farmer E, Chase-Topping M, Lawson H, Clutton RE.

Equine Vet J. 2014 May;46(3):328-32. doi: 10.1111/evj.12133. Epub 2013 Sep 30.


Characterization of Escherichia coli O157:H7 strains isolated from supershedding cattle.

Arthur TM, Ahmed R, Chase-Topping M, Kalchayanand N, Schmidt JW, Bono JL.

Appl Environ Microbiol. 2013 Jul;79(14):4294-303. doi: 10.1128/AEM.00846-13. Epub 2013 May 3.


Disease transmission on fragmented contact networks: livestock-associated Methicillin-resistant Staphylococcus aureus in the Danish pig-industry.

Ciccolini M, Dahl J, Chase-Topping ME, Woolhouse ME.

Epidemics. 2012 Dec;4(4):171-8. doi: 10.1016/j.epidem.2012.09.001. Epub 2012 Sep 15.


Phenoloxidase activity acts as a mosquito innate immune response against infection with Semliki Forest virus.

Rodriguez-Andres J, Rani S, Varjak M, Chase-Topping ME, Beck MH, Ferguson MC, Schnettler E, Fragkoudis R, Barry G, Merits A, Fazakerley JK, Strand MR, Kohl A.

PLoS Pathog. 2012;8(11):e1002977. doi: 10.1371/journal.ppat.1002977. Epub 2012 Nov 8.


Human viruses: discovery and emergence.

Woolhouse M, Scott F, Hudson Z, Howey R, Chase-Topping M.

Philos Trans R Soc Lond B Biol Sci. 2012 Oct 19;367(1604):2864-71. doi: 10.1098/rstb.2011.0354.


Lysogeny with Shiga toxin 2-encoding bacteriophages represses type III secretion in enterohemorrhagic Escherichia coli.

Xu X, McAteer SP, Tree JJ, Shaw DJ, Wolfson EB, Beatson SA, Roe AJ, Allison LJ, Chase-Topping ME, Mahajan A, Tozzoli R, Woolhouse ME, Morabito S, Gally DL.

PLoS Pathog. 2012;8(5):e1002672. doi: 10.1371/journal.ppat.1002672. Epub 2012 May 17.


Pathogenic potential to humans of bovine Escherichia coli O26, Scotland.

Chase-Topping ME, Rosser T, Allison LJ, Courcier E, Evans J, McKendrick IJ, Pearce MC, Handel I, Caprioli A, Karch H, Hanson MF, Pollock KG, Locking ME, Woolhouse ME, Matthews L, Low JC, Gally DL.

Emerg Infect Dis. 2012 Mar;18(3):439-48. doi: 10.3201/eid1803.111236.


Sero-prevalence and incidence of A/H1N1 2009 influenza infection in Scotland in winter 2009-2010.

McLeish NJ, Simmonds P, Robertson C, Handel I, McGilchrist M, Singh BK, Kerr S, Chase-Topping ME, Sinka K, Bronsvoort M, Porteous DJ, Carman W, McMenamin J, Leigh-Brown A, Woolhouse ME.

PLoS One. 2011;6(6):e20358. doi: 10.1371/journal.pone.0020358. Epub 2011 Jun 8.


Relationship between clinical signs and transmission of an infectious disease and the implications for control.

Charleston B, Bankowski BM, Gubbins S, Chase-Topping ME, Schley D, Howey R, Barnett PV, Gibson D, Juleff ND, Woolhouse ME.

Science. 2011 May 6;332(6030):726-9. doi: 10.1126/science.1199884. Erratum in: Science. 2011 Jun 10;332(6035):1263.


Antiviral RNA interference responses induced by Semliki Forest virus infection of mosquito cells: characterization, origin, and frequency-dependent functions of virus-derived small interfering RNAs.

Siu RW, Fragkoudis R, Simmonds P, Donald CL, Chase-Topping ME, Barry G, Attarzadeh-Yazdi G, Rodriguez-Andres J, Nash AA, Merits A, Fazakerley JK, Kohl A.

J Virol. 2011 Mar;85(6):2907-17. doi: 10.1128/JVI.02052-10. Epub 2010 Dec 29.


Vertical dimensions of suspended horses.

Clutton RE, Chase-Topping M, Squires R, Lawson H, Minard H, Rose S.

Equine Vet J. 2010 Nov;42(8):758-61. doi: 10.1111/j.2042-3306.2010.00167.x. Epub 2010 Sep 14.


Spread of E. coli O157 infection among Scottish cattle farms: stochastic models and model selection.

Zhang XS, Chase-Topping ME, McKendrick IJ, Savill NJ, Woolhouse ME.

Epidemics. 2010 Mar;2(1):11-20. doi: 10.1016/j.epidem.2010.02.001.


A comparison of four systems for scoring recovery quality after general anaesthesia in horses.

Vettorato E, Chase-Topping ME, Clutton RE.

Equine Vet J. 2010 Jul;42(5):400-6. doi: 10.1111/j.2042-3306.2010.00093.x.


Comparison of subjective scoring systems used to evaluate equine laminitis.

Viñuela-Fernández I, Jones E, Chase-Topping ME, Price J.

Vet J. 2011 May;188(2):171-7. doi: 10.1016/j.tvjl.2010.05.011. Epub 2010 Jun 11.


Temporal and spatial patterns of bovine Escherichia coli O157 prevalence and comparison of temporal changes in the patterns of phage types associated with bovine shedding and human E. coli O157 cases in Scotland between 1998-2000 and 2002-2004.

Pearce MC, Chase-Topping ME, McKendrick IJ, Mellor DJ, Locking ME, Allison L, Ternent HE, Matthews L, Knight HI, Smith AW, Synge BA, Reilly W, Low JC, Reid SW, Gunn GJ, Woolhouse ME.

BMC Microbiol. 2009 Dec 29;9:276. doi: 10.1186/1471-2180-9-276.


Exploiting strain diversity to expose transmission heterogeneities and predict the impact of targeting supershedding.

Matthews L, Reeve R, Woolhouse ME, Chase-Topping M, Mellor DJ, Pearce MC, Allison LJ, Gunn GJ, Low JC, Reid SW.

Epidemics. 2009 Dec;1(4):221-9. doi: 10.1016/j.epidem.2009.10.002. Epub 2009 Oct 27.


Super-shedding and the link between human infection and livestock carriage of Escherichia coli O157.

Chase-Topping M, Gally D, Low C, Matthews L, Woolhouse M.

Nat Rev Microbiol. 2008 Dec;6(12):904-12. doi: 10.1038/nrmicro2029. Review.


Temporal trends in the discovery of human viruses.

Woolhouse ME, Howey R, Gaunt E, Reilly L, Chase-Topping M, Savill N.

Proc Biol Sci. 2008 Sep 22;275(1647):2111-5. doi: 10.1098/rspb.2008.0294.


The effects of morphine on the recovery of horses from halothane anaesthesia.

Clark L, Clutton RE, Blissitt KJ, Chase-Topping ME.

Vet Anaesth Analg. 2008 Jan;35(1):22-9. Epub 2007 Jun 12.


Risk factors for the presence of high-level shedders of Escherichia coli O157 on Scottish farms.

Chase-Topping ME, McKendrick IJ, Pearce MC, MacDonald P, Matthews L, Halliday J, Allison L, Fenlon D, Low JC, Gunn G, Woolhouse ME.

J Clin Microbiol. 2007 May;45(5):1594-603. Epub 2007 Mar 14.


Metapopulation dynamics of Escherichia coli O157 in cattle: an exploratory model.

Liu WC, Matthews L, Chase-Topping M, Savill NJ, Shaw DJ, Woolhouse ME.

J R Soc Interface. 2007 Oct 22;4(16):917-24.


Herd-level risk factors associated with the presence of Phage type 21/28 E. coli O157 on Scottish cattle farms.

Halliday JE, Chase-Topping ME, Pearce MC, McKendrick IJ, Allison L, Fenlon D, Low C, Mellor DJ, Gunn GJ, Woolhouse ME.

BMC Microbiol. 2006 Dec 2;6:99.


Epidemiology of porcine non-specific colitis on Scottish farms.

Chase-Topping ME, Gunn G, Strachan WD, Edwards SA, Smith WJ, Hillman K, Stefopoulou SN, Thomson JR.

Vet J. 2007 Mar;173(2):353-60. Epub 2006 Feb 3.


Heterogeneous shedding of Escherichia coli O157 in cattle and its implications for control.

Matthews L, Low JC, Gally DL, Pearce MC, Mellor DJ, Heesterbeek JA, Chase-Topping M, Naylor SW, Shaw DJ, Reid SW, Gunn GJ, Woolhouse ME.

Proc Natl Acad Sci U S A. 2006 Jan 17;103(3):547-52. Epub 2006 Jan 9.


Comparative evidence for a link between Peyer's patch development and susceptibility to transmissible spongiform encephalopathies.

St Rose SG, Hunter N, Matthews L, Foster JD, Chase-Topping ME, Kruuk LE, Shaw DJ, Rhind SM, Will RG, Woolhouse ME.

BMC Infect Dis. 2006 Jan 11;6:5.


Modelling the spread of scrapie in a sheep flock: evidence for increased transmission during lambing seasons.

Touzeau S, Chase-Topping ME, Matthews L, Lajous D, Eychenne F, Hunter N, Foster JD, Simm G, Elsen JM, Woolhouse ME.

Arch Virol. 2006 Apr;151(4):735-51. Epub 2005 Nov 23.


Molecular epidemiology of antimicrobial-resistant commensal Escherichia coli strains in a cohort of newborn calves.

Hoyle DV, Yates CM, Chase-Topping ME, Turner EJ, Davies SE, Low JC, Gunn GJ, Woolhouse ME, Amyes SG.

Appl Environ Microbiol. 2005 Nov;71(11):6680-8.


Genotype-level variation in lifetime breeding success, litter size and survival of sheep in scrapie-affected flocks.

Chase-Topping ME, Kruuk LE, Lajous D, Touzeau S, Matthews L, Simm G, Foster JD, Rupp R, Eychenne F, Hunter N, Elsen JM, Woolhouse ME.

J Gen Virol. 2005 Apr;86(Pt 4):1229-38.


Effects of peri-operative morphine administration during halothane anaesthesia in horses.

Clark L, Clutton RE, Blissitt KJ, Chase-Topping ME.

Vet Anaesth Analg. 2005 Jan;32(1):10-5.


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