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Items: 10

1.

Characterization and phylogenetic diversity of Allorhizobium vitis isolated from grapevine in Morocco.

Habbadi K, Duplay Q, Chapulliot D, Kerzaon I, Benkirane R, Benbouazza A, Wisniewski-Dyé F, Lavire C, Achbani EH, Vial L.

J Appl Microbiol. 2020 Mar;128(3):828-839. doi: 10.1111/jam.14523. Epub 2019 Dec 9.

PMID:
31755153
2.

Anthropization level of Lascaux Cave microbiome shown by regional-scale comparisons of pristine and anthropized caves.

Alonso L, Pommier T, Kaufmann B, Dubost A, Chapulliot D, Doré J, Douady CJ, Moënne-Loccoz Y.

Mol Ecol. 2019 Jul;28(14):3383-3394. doi: 10.1111/mec.15144. Epub 2019 Jul 24.

PMID:
31177607
3.

Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium.

Lassalle F, Planel R, Penel S, Chapulliot D, Barbe V, Dubost A, Calteau A, Vallenet D, Mornico D, Bigot T, Guéguen L, Vial L, Muller D, Daubin V, Nesme X.

Genome Biol Evol. 2017 Dec 1;9(12):3413-3431. doi: 10.1093/gbe/evx255.

4.

Draft Genome Sequence of Chryseobacterium sp. JV274 Isolated from Maize Rhizosphere.

Vacheron J, Dubost A, Chapulliot D, Prigent-Combaret C, Muller D.

Genome Announc. 2017 Apr 13;5(15). pii: e00122-17. doi: 10.1128/genomeA.00122-17.

5.

Genomic characterization of Ensifer aridi, a proposed new species of nitrogen-fixing rhizobium recovered from Asian, African and American deserts.

Le Quéré A, Tak N, Gehlot HS, Lavire C, Meyer T, Chapulliot D, Rathi S, Sakrouhi I, Rocha G, Rohmer M, Severac D, Filali-Maltouf A, Munive JA.

BMC Genomics. 2017 Jan 14;18(1):85. doi: 10.1186/s12864-016-3447-y.

6.

Single acquisition of protelomerase gave rise to speciation of a large and diverse clade within the Agrobacterium/Rhizobium supercluster characterized by the presence of a linear chromid.

Ramírez-Bahena MH, Vial L, Lassalle F, Diel B, Chapulliot D, Daubin V, Nesme X, Muller D.

Mol Phylogenet Evol. 2014 Apr;73:202-7. doi: 10.1016/j.ympev.2014.01.005. Epub 2014 Jan 17.

PMID:
24440816
7.

Rapid and accurate species and genomic species identification and exhaustive population diversity assessment of Agrobacterium spp. using recA-based PCR.

Shams M, Vial L, Chapulliot D, Nesme X, Lavire C.

Syst Appl Microbiol. 2013 Jul;36(5):351-8. doi: 10.1016/j.syapm.2013.03.002. Epub 2013 Apr 8.

PMID:
23578959
8.

Genomic species are ecological species as revealed by comparative genomics in Agrobacterium tumefaciens.

Lassalle F, Campillo T, Vial L, Baude J, Costechareyre D, Chapulliot D, Shams M, Abrouk D, Lavire C, Oger-Desfeux C, Hommais F, Guéguen L, Daubin V, Muller D, Nesme X.

Genome Biol Evol. 2011;3:762-81. doi: 10.1093/gbe/evr070. Epub 2011 Jul 27.

9.

Rapid and efficient identification of Agrobacterium species by recA allele analysis: Agrobacterium recA diversity.

Costechareyre D, Rhouma A, Lavire C, Portier P, Chapulliot D, Bertolla F, Boubaker A, Dessaux Y, Nesme X.

Microb Ecol. 2010 Nov;60(4):862-72. doi: 10.1007/s00248-010-9685-7. Epub 2010 Jun 3.

PMID:
20521039
10.

Identification of genomic species in Agrobacterium biovar 1 by AFLP genomic markers.

Portier P, Fischer-Le Saux M, Mougel C, Lerondelle C, Chapulliot D, Thioulouse J, Nesme X.

Appl Environ Microbiol. 2006 Nov;72(11):7123-31. Epub 2006 Aug 25.

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