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Items: 7

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1.

Genetic programs in human and mouse early embryos revealed by single-cell RNA sequencing.

Xue Z, Huang K, Cai C, Cai L, Jiang CY, Feng Y, Liu Z, Zeng Q, Cheng L, Sun YE, Liu JY, Horvath S, Fan G.

Nature. 2013 Aug 29;500(7464):593-7. doi: 10.1038/nature12364. Epub 2013 Jul 28.

2.

Systems analysis of primary Sjögren's syndrome pathogenesis in salivary glands identifies shared pathways in human and a mouse model.

Horvath S, Nazmul-Hossain AN, Pollard RP, Kroese FG, Vissink A, Kallenberg CG, Spijkervet FK, Bootsma H, Michie SA, Gorr SU, Peck AB, Cai C, Zhou H, Wong DT.

Arthritis Res Ther. 2012 Nov 1;14(6):R238. doi: 10.1186/ar4081.

3.

Genome-wide transcriptome profiling reveals the functional impact of rare de novo and recurrent CNVs in autism spectrum disorders.

Luo R, Sanders SJ, Tian Y, Voineagu I, Huang N, Chu SH, Klei L, Cai C, Ou J, Lowe JK, Hurles ME, Devlin B, State MW, Geschwind DH.

Am J Hum Genet. 2012 Jul 13;91(1):38-55. doi: 10.1016/j.ajhg.2012.05.011. Epub 2012 Jun 21.

4.

Resting-state quantitative electroencephalography reveals increased neurophysiologic connectivity in depression.

Leuchter AF, Cook IA, Hunter AM, Cai C, Horvath S.

PLoS One. 2012;7(2):e32508. doi: 10.1371/journal.pone.0032508. Epub 2012 Feb 24.

5.

Strategies for aggregating gene expression data: the collapseRows R function.

Miller JA, Cai C, Langfelder P, Geschwind DH, Kurian SM, Salomon DR, Horvath S.

BMC Bioinformatics. 2011 Aug 4;12:322. doi: 10.1186/1471-2105-12-322.

6.

Functional modules distinguish human induced pluripotent stem cells from embryonic stem cells.

Wang A, Huang K, Shen Y, Xue Z, Cai C, Horvath S, Fan G.

Stem Cells Dev. 2011 Nov;20(11):1937-50. doi: 10.1089/scd.2010.0574. Epub 2011 Jun 20.

7.

Is human blood a good surrogate for brain tissue in transcriptional studies?

Cai C, Langfelder P, Fuller TF, Oldham MC, Luo R, van den Berg LH, Ophoff RA, Horvath S.

BMC Genomics. 2010 Oct 20;11:589. doi: 10.1186/1471-2164-11-589.

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