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Items: 1 to 50 of 82

1.

Functional diversification of maize RNA polymerase IV and V subtypes via alternative catalytic subunits.

Haag JR, Brower-Toland B, Krieger EK, Sidorenko L, Nicora CD, Norbeck AD, Irsigler A, LaRue H, Brzeski J, McGinnis K, Ivashuta S, Pasa-Tolic L, Chandler VL, Pikaard CS.

Cell Rep. 2014 Oct 9;9(1):378-390. doi: 10.1016/j.celrep.2014.08.067. Epub 2014 Oct 2.

2.

Specific tandem repeats are sufficient for paramutation-induced trans-generational silencing.

Belele CL, Sidorenko L, Stam M, Bader R, Arteaga-Vazquez MA, Chandler VL.

PLoS Genet. 2013;9(10):e1003773. doi: 10.1371/journal.pgen.1003773. Epub 2013 Oct 17.

3.

High SINE RNA Expression Correlates with Post-Transcriptional Downregulation of BRCA1.

Peterson M, Chandler VL, Bosco G.

Genes (Basel). 2013 Apr 29;4(2):226-43. doi: 10.3390/genes4020226.

4.

Maize Unstable factor for orange1 is required for maintaining silencing associated with paramutation at the pericarp color1 and booster1 loci.

Sekhon RS, Wang PH, Sidorenko L, Chandler VL, Chopra S.

PLoS Genet. 2012;8(10):e1002980. doi: 10.1371/journal.pgen.1002980. Epub 2012 Oct 4.

5.

Paramutation's properties and puzzles.

Chandler VL.

Science. 2010 Oct 29;330(6004):628-9. doi: 10.1126/science.1191044.

PMID:
21030647
6.

RNA-mediated trans-communication can establish paramutation at the b1 locus in maize.

Arteaga-Vazquez M, Sidorenko L, Rabanal FA, Shrivistava R, Nobuta K, Green PJ, Meyers BC, Chandler VL.

Proc Natl Acad Sci U S A. 2010 Jul 20;107(29):12986-91. doi: 10.1073/pnas.1007972107. Epub 2010 Jun 29.

7.

Transgenic expression of CBBP, a CXC domain protein, establishes paramutation in maize.

Brzeska K, Brzeski J, Smith J, Chandler VL.

Proc Natl Acad Sci U S A. 2010 Mar 23;107(12):5516-21. doi: 10.1073/pnas.1001576107. Epub 2010 Mar 8.

8.

Paramutation in maize: RNA mediated trans-generational gene silencing.

Arteaga-Vazquez MA, Chandler VL.

Curr Opin Genet Dev. 2010 Apr;20(2):156-63. doi: 10.1016/j.gde.2010.01.008. Epub 2010 Feb 12. Review.

9.

A dominant mutation in mediator of paramutation2, one of three second-largest subunits of a plant-specific RNA polymerase, disrupts multiple siRNA silencing processes.

Sidorenko L, Dorweiler JE, Cigan AM, Arteaga-Vazquez M, Vyas M, Kermicle J, Jurcin D, Brzeski J, Cai Y, Chandler VL.

PLoS Genet. 2009 Nov;5(11):e1000725. doi: 10.1371/journal.pgen.1000725. Epub 2009 Nov 20.

10.

Distinct size distribution of endogeneous siRNAs in maize: Evidence from deep sequencing in the mop1-1 mutant.

Nobuta K, Lu C, Shrivastava R, Pillay M, De Paoli E, Accerbi M, Arteaga-Vazquez M, Sidorenko L, Jeong DH, Yen Y, Green PJ, Chandler VL, Meyers BC.

Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):14958-63. doi: 10.1073/pnas.0808066105. Epub 2008 Sep 24.

11.

Gene expression analyses in maize inbreds and hybrids with varying levels of heterosis.

Stupar RM, Gardiner JM, Oldre AG, Haun WJ, Chandler VL, Springer NM.

BMC Plant Biol. 2008 Apr 10;8:33. doi: 10.1186/1471-2229-8-33.

12.

Paramutation: from maize to mice.

Chandler VL.

Cell. 2007 Feb 23;128(4):641-5. Review.

13.

An RNA-dependent RNA polymerase is required for paramutation in maize.

Alleman M, Sidorenko L, McGinnis K, Seshadri V, Dorweiler JE, White J, Sikkink K, Chandler VL.

Nature. 2006 Jul 20;442(7100):295-8.

PMID:
16855589
14.

Poetry of b1 paramutation: cis- and trans-chromatin communication.

Chandler VL.

Cold Spring Harb Symp Quant Biol. 2004;69:355-61. Review. No abstract available.

PMID:
16117668
15.

Different mechanisms participate in the R-dependent activity of the R2R3 MYB transcription factor C1.

Hernandez JM, Heine GF, Irani NG, Feller A, Kim MG, Matulnik T, Chandler VL, Grotewold E.

J Biol Chem. 2004 Nov 12;279(46):48205-13. Epub 2004 Aug 29.

16.

Chromatin conversations: mechanisms and implications of paramutation.

Chandler VL, Stam M.

Nat Rev Genet. 2004 Jul;5(7):532-44. Review. No abstract available.

PMID:
15211355
18.

Comparative analysis of SET domain proteins in maize and Arabidopsis reveals multiple duplications preceding the divergence of monocots and dicots.

Springer NM, Napoli CA, Selinger DA, Pandey R, Cone KC, Chandler VL, Kaeppler HF, Kaeppler SM.

Plant Physiol. 2003 Jun;132(2):907-25. Epub 2003 May 1.

19.

The Maize Genome Sequencing Project.

Chandler VL, Brendel V.

Plant Physiol. 2002 Dec;130(4):1594-7. Review. No abstract available.

20.

The regulatory regions required for B' paramutation and expression are located far upstream of the maize b1 transcribed sequences.

Stam M, Belele C, Ramakrishna W, Dorweiler JE, Bennetzen JL, Chandler VL.

Genetics. 2002 Oct;162(2):917-30.

21.
22.

A mutation that prevents paramutation in maize also reverses Mutator transposon methylation and silencing.

Lisch D, Carey CC, Dorweiler JE, Chandler VL.

Proc Natl Acad Sci U S A. 2002 Apr 30;99(9):6130-5. Epub 2002 Apr 16.

23.

Long-distance cis and trans interactions mediate paramutation.

Chandler VL, Stam M, Sidorenko LV.

Adv Genet. 2002;46:215-34. Review. No abstract available.

PMID:
11931225
24.

Comparison of RNA expression profiles based on maize expressed sequence tag frequency analysis and micro-array hybridization.

Fernandes J, Brendel V, Gai X, Lal S, Chandler VL, Elumalai RP, Galbraith DW, Pierson EA, Walbot V.

Plant Physiol. 2002 Mar;128(3):896-910.

25.

National Science Foundation-sponsored workshop report. Maize genome sequencing project.

Bennetzen JL, Chandler VL, Schnable P.

Plant Physiol. 2001 Dec;127(4):1572-8. No abstract available.

27.

Grasses. a collective model genetic system.

Chandler VL, Wessler S.

Plant Physiol. 2001 Mar;125(3):1155-6. No abstract available.

28.

Gene activation and gene silencing.

Chandler VL, Vaucheret H.

Plant Physiol. 2001 Jan;125(1):145-8. Review. No abstract available.

29.
30.

Identification of the residues in the Myb domain of maize C1 that specify the interaction with the bHLH cofactor R.

Grotewold E, Sainz MB, Tagliani L, Hernandez JM, Bowen B, Chandler VL.

Proc Natl Acad Sci U S A. 2000 Dec 5;97(25):13579-84.

31.

mediator of paramutation1 is required for establishment and maintenance of paramutation at multiple maize loci.

Dorweiler JE, Carey CC, Kubo KM, Hollick JB, Kermicle JL, Chandler VL.

Plant Cell. 2000 Nov;12(11):2101-18.

32.

Paramutation in maize.

Chandler VL, Eggleston WB, Dorweiler JE.

Plant Mol Biol. 2000 Jun;43(2-3):121-45. Review.

PMID:
10999400
33.

Silencing Morpheus awakens transgenes.

Chandler VL, Jorgensen R.

Nat Biotechnol. 2000 Jun;18(6):602-3. No abstract available.

PMID:
10835595
34.

Paramutation alters regulatory control of the maize pl locus.

Hollick JB, Patterson GI, Asmundsson IM, Chandler VL.

Genetics. 2000 Apr;154(4):1827-38.

35.
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38.
40.

Paramutation and related allelic interactions.

Hollick JB, Dorweiler JE, Chandler VL.

Trends Genet. 1997 Aug;13(8):302-8. Review.

PMID:
9260515
43.

Allelic interactions heritably alter the activity of a metastable maize pl allele.

Hollick JB, Patterson GI, Coe EH Jr, Cone KC, Chandler VL.

Genetics. 1995 Oct;141(2):709-19.

44.
45.

Characterization of the major transcripts encoded by the regulatory MuDR transposable element of maize.

Hershberger RJ, Benito MI, Hardeman KJ, Warren C, Chandler VL, Walbot V.

Genetics. 1995 Jul;140(3):1087-98.

46.

Paramutation in maize and related allelic interactions.

Patterson GI, Chandler VL.

Curr Top Microbiol Immunol. 1995;197:121-41. Review. No abstract available.

PMID:
7493488
47.

Large tandem duplication associated with a Mu2 insertion in Zea mays B-Peru gene.

Harris LJ, Currie K, Chandler VL.

Plant Mol Biol. 1994 Aug;25(5):817-28.

PMID:
8075398
48.

Epigenetic effects in eukaryotic gene expression.

Bestor TH, Chandler VL, Feinberg AP.

Dev Genet. 1994;15(6):458-62. Review.

PMID:
7834904
49.

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