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Items: 1 to 50 of 84

1.

The contribution of voltage clamp fluorometry to the understanding of channel and transporter mechanisms.

Cowgill J, Chanda B.

J Gen Physiol. 2019 Oct 7;151(10):1163-1172. doi: 10.1085/jgp.201912372. Epub 2019 Aug 20. Review.

PMID:
31431491
2.

NMR Structural Analysis of Isolated Shaker Voltage-Sensing Domain in LPPG Micelles.

Chen H, Pan J, Gandhi DM, Dockendorff C, Cui Q, Chanda B, Henzler-Wildman KA.

Biophys J. 2019 Jul 23;117(2):388-398. doi: 10.1016/j.bpj.2019.06.020. Epub 2019 Jun 26.

PMID:
31301804
3.

Multiple Pyramids Based Image Inpainting Using Local Patch Statistics and Steering Kernel Feature.

Ghorai M, Samanta S, Mandal S, Chanda B.

IEEE Trans Image Process. 2019 Nov;28(11):5495-5509. doi: 10.1109/TIP.2019.2920528. Epub 2019 Jun 7.

PMID:
31180857
4.

Sodium channels caught in the act.

Chowdhury S, Chanda B.

Science. 2019 Mar 22;363(6433):1278-1279. doi: 10.1126/science.aaw8645. No abstract available.

PMID:
30898917
5.

Acceptability of option B+ among HIV positive women receiving antenatal and postnatal care services in selected health centre's in Lusaka.

Chanda BC, Likwa RN, Zgambo J, Tembo L, Jacobs C.

BMC Pregnancy Childbirth. 2018 Dec 29;18(1):510. doi: 10.1186/s12884-018-2142-1.

6.

Bipolar switching by HCN voltage sensor underlies hyperpolarization activation.

Cowgill J, Klenchin VA, Alvarez-Baron C, Tewari D, Blair A, Chanda B.

Proc Natl Acad Sci U S A. 2019 Jan 8;116(2):670-678. doi: 10.1073/pnas.1816724116. Epub 2018 Dec 26.

7.

Learning a Patch Quality Comparator for Single Image Dehazing.

Santra S, Mondal R, Chanda B.

IEEE Trans Image Process. 2018 May 28. doi: 10.1109/TIP.2018.2841198. [Epub ahead of print]

PMID:
29993719
8.

Minimal molecular determinants of isoform-specific differences in efficacy in the HCN channel family.

Alvarez-Baron CP, Klenchin VA, Chanda B.

J Gen Physiol. 2018 Aug 6;150(8):1203-1213. doi: 10.1085/jgp.201812031. Epub 2018 Jul 6.

9.

Gating interaction maps reveal a noncanonical electromechanical coupling mode in the Shaker K+ channel.

Fernández-Mariño AI, Harpole TJ, Oelstrom K, Delemotte L, Chanda B.

Nat Struct Mol Biol. 2018 Apr;25(4):320-326. doi: 10.1038/s41594-018-0047-3. Epub 2018 Mar 26.

10.

Dynamics and number of trans-SNARE complexes determine nascent fusion pore properties.

Bao H, Das D, Courtney NA, Jiang Y, Briguglio JS, Lou X, Roston D, Cui Q, Chanda B, Chapman ER.

Nature. 2018 Feb 8;554(7691):260-263. doi: 10.1038/nature25481. Epub 2018 Jan 31.

11.

DIVARICATA AND RADIALIS INTERACTING FACTOR (DRIF) also interacts with WOX and KNOX proteins associated with wood formation in Populus trichocarpa.

Petzold HE, Chanda B, Zhao C, Rigoulot SB, Beers EP, Brunner AM.

Plant J. 2018 Mar;93(6):1076-1087. doi: 10.1111/tpj.13831. Epub 2018 Feb 23.

12.

A Group-Based Image Inpainting Using Patch Refinement in MRF Framework.

Ghorai M, Mandal S, Chanda B.

IEEE Trans Image Process. 2018 Feb;27(2):556-567. doi: 10.1109/TIP.2017.2768180.

PMID:
29136609
13.

Identification of new protein-protein and protein-DNA interactions linked with wood formation in Populus trichocarpa.

Petzold HE, Rigoulot SB, Zhao C, Chanda B, Sheng X, Zhao M, Jia X, Dickerman AW, Beers EP, Brunner AM.

Tree Physiol. 2018 Mar 1;38(3):362-377. doi: 10.1093/treephys/tpx121.

PMID:
29040741
14.

SnapShot: Channel Gating Mechanisms.

Goldschen-Ohm MP, Chanda B.

Cell. 2017 Jul 27;170(3):594-594.e1. doi: 10.1016/j.cell.2017.07.019.

15.

XYLEM NAC DOMAIN1, an angiosperm NAC transcription factor, inhibits xylem differentiation through conserved motifs that interact with RETINOBLASTOMA-RELATED.

Zhao C, Lasses T, Bako L, Kong D, Zhao B, Chanda B, Bombarely A, Cruz-Ramírez A, Scheres B, Brunner AM, Beers EP.

New Phytol. 2017 Oct;216(1):76-89. doi: 10.1111/nph.14704. Epub 2017 Jul 25.

16.

The intrinsically liganded cyclic nucleotide-binding homology domain promotes KCNH channel activation.

Zhao Y, Goldschen-Ohm MP, Morais-Cabral JH, Chanda B, Robertson GA.

J Gen Physiol. 2017 Feb;149(2):249-260. doi: 10.1085/jgp.201611701. Epub 2017 Jan 25.

17.

Observing Single-Molecule Dynamics at Millimolar Concentrations.

Goldschen-Ohm MP, White DS, Klenchin VA, Chanda B, Goldsmith RH.

Angew Chem Int Ed Engl. 2017 Feb 20;56(9):2399-2402. doi: 10.1002/anie.201612050. Epub 2017 Jan 24.

18.

Structure and dynamics underlying elementary ligand binding events in human pacemaking channels.

Goldschen-Ohm MP, Klenchin VA, White DS, Cowgill JB, Cui Q, Goldsmith RH, Chanda B.

Elife. 2016 Nov 18;5. pii: e20797. doi: 10.7554/eLife.20797.

19.
20.

The hitchhiker's guide to the voltage-gated sodium channel galaxy.

Ahern CA, Payandeh J, Bosmans F, Chanda B.

J Gen Physiol. 2016 Jan;147(1):1-24. doi: 10.1085/jgp.201511492. Review.

21.

Exocytotic fusion pores are composed of both lipids and proteins.

Bao H, Goldschen-Ohm M, Jeggle P, Chanda B, Edwardson JM, Chapman ER.

Nat Struct Mol Biol. 2016 Jan;23(1):67-73. doi: 10.1038/nsmb.3141. Epub 2015 Dec 14.

22.

Instability of the Arabidopsis mutant csn5a-2 caused by epigenetic modification of intronic T-DNA.

Jia X, Chanda B, Zhao M, Brunner AM, Beers EP.

Plant Sci. 2015 Sep;238:53-63. doi: 10.1016/j.plantsci.2015.05.015. Epub 2015 May 23.

PMID:
26259174
23.

How to open a proton pore-more than S4?

Goldschen-Ohm MP, Chanda B.

Nat Struct Mol Biol. 2015 Apr;22(4):277-8. doi: 10.1038/nsmb.2997.

PMID:
25837872
24.

A self-consistent approach for determining pairwise interactions that underlie channel activation.

Chowdhury S, Haehnel BM, Chanda B.

J Gen Physiol. 2014 Nov;144(5):441-55. doi: 10.1085/jgp.201411184. Epub 2014 Oct 13.

25.

Interfacial gating triad is crucial for electromechanical transduction in voltage-activated potassium channels.

Chowdhury S, Haehnel BM, Chanda B.

J Gen Physiol. 2014 Nov;144(5):457-67. doi: 10.1085/jgp.201411185. Epub 2014 Oct 13.

26.

A molecular framework for temperature-dependent gating of ion channels.

Chowdhury S, Jarecki BW, Chanda B.

Cell. 2014 Aug 28;158(5):1148-1158. doi: 10.1016/j.cell.2014.07.026. Epub 2014 Aug 21.

27.

Cutaneous leishmaniasis in an immigrant Saudi worker: a case report.

Rahman H, Razzak MA, Chanda BC, Bhaskar KR, Mondal D.

J Health Popul Nutr. 2014 Jun;32(2):372-6.

28.

Taking a thermodynamic approach: a conversation with Baron Chanda.

Chanda B, Adler EM.

J Gen Physiol. 2014 Aug;144(2):127. doi: 10.1085/jgp.201411251. No abstract available.

29.

Probing gating mechanisms of sodium channels using pore blockers.

Goldschen-Ohm MP, Chanda B.

Handb Exp Pharmacol. 2014;221:183-201. doi: 10.1007/978-3-642-41588-3_9. Review.

PMID:
24737237
30.

A fuzzy-rule-based approach for single frame super resolution.

Purkait P, Pal NR, Chanda B.

IEEE Trans Image Process. 2014 May;23(5):2277-90.

PMID:
24723625
31.

Small RNA as a regulator of hematopoietic development, immune response in infection and tumorigenesis.

Okuyama K, Ogata J, Yamakawa N, Chanda B, Kotani A.

Int J Hematol. 2014;99(5):553-60. doi: 10.1007/s12185-014-1564-4. Epub 2014 Apr 1. Review.

PMID:
24687917
32.

Novel functional small RNAs are selectively loaded onto mammalian Ago1.

Yamakawa N, Okuyama K, Ogata J, Kanai A, Helwak A, Takamatsu M, Imadome K, Takakura K, Chanda B, Kurosaki N, Yamamoto H, Ando K, Matsui H, Inaba T, Kotani A.

Nucleic Acids Res. 2014 Apr;42(8):5289-301. doi: 10.1093/nar/gku137. Epub 2014 Mar 13.

33.

Evolutionarily conserved intracellular gate of voltage-dependent sodium channels.

Oelstrom K, Goldschen-Ohm MP, Holmgren M, Chanda B.

Nat Commun. 2014 Mar 12;5:3420. doi: 10.1038/ncomms4420.

34.

Tethered spectroscopic probes estimate dynamic distances with subnanometer resolution in voltage-dependent potassium channels.

Jarecki BW, Zheng S, Zhang L, Li X, Zhou X, Cui Q, Tang W, Chanda B.

Biophys J. 2013 Dec 17;105(12):2724-32. doi: 10.1016/j.bpj.2013.11.010.

35.

Retinoic acid signaling is essential for embryonic hematopoietic stem cell development.

Chanda B, Ditadi A, Iscove NN, Keller G.

Cell. 2013 Sep 26;155(1):215-27. doi: 10.1016/j.cell.2013.08.055.

36.

MicroRNA-126-mediated control of cell fate in B-cell myeloid progenitors as a potential alternative to transcriptional factors.

Okuyama K, Ikawa T, Gentner B, Hozumi K, Harnprasopwat R, Lu J, Yamashita R, Ha D, Toyoshima T, Chanda B, Kawamata T, Yokoyama K, Wang S, Ando K, Lodish HF, Tojo A, Kawamoto H, Kotani A.

Proc Natl Acad Sci U S A. 2013 Aug 13;110(33):13410-5. doi: 10.1073/pnas.1220710110. Epub 2013 Jul 26.

37.

Domain IV voltage-sensor movement is both sufficient and rate limiting for fast inactivation in sodium channels.

Capes DL, Goldschen-Ohm MP, Arcisio-Miranda M, Bezanilla F, Chanda B.

J Gen Physiol. 2013 Aug;142(2):101-12. doi: 10.1085/jgp.201310998. Epub 2013 Jul 15.

38.

A feedback regulatory loop between G3P and lipid transfer proteins DIR1 and AZI1 mediates azelaic-acid-induced systemic immunity.

Yu K, Soares JM, Mandal MK, Wang C, Chanda B, Gifford AN, Fowler JS, Navarre D, Kachroo A, Kachroo P.

Cell Rep. 2013 Apr 25;3(4):1266-78. doi: 10.1016/j.celrep.2013.03.030. Epub 2013 Apr 18.

39.

Multiple pore conformations driven by asynchronous movements of voltage sensors in a eukaryotic sodium channel.

Goldschen-Ohm MP, Capes DL, Oelstrom KM, Chanda B.

Nat Commun. 2013;4:1350. doi: 10.1038/ncomms2356.

40.

Function of Shaker potassium channels produced by cell-free translation upon injection into Xenopus oocytes.

Jarecki BW, Makino S, Beebe ET, Fox BG, Chanda B.

Sci Rep. 2013;3:1040. doi: 10.1038/srep01040. Epub 2013 Jan 8.

41.

Free-energy relationships in ion channels activated by voltage and ligand.

Chowdhury S, Chanda B.

J Gen Physiol. 2013 Jan;141(1):11-28. doi: 10.1085/jgp.201210860. Epub 2012 Dec 17.

42.

Perspectives on: conformational coupling in ion channels: thermodynamics of electromechanical coupling in voltage-gated ion channels.

Chowdhury S, Chanda B.

J Gen Physiol. 2012 Dec;140(6):613-23. doi: 10.1085/jgp.201210840. No abstract available.

43.

Mitral valve replacement following a failed MitraClip procedure.

Chanda B, Venn GE.

Eur J Cardiothorac Surg. 2012 Oct;42(4):739-40. doi: 10.1093/ejcts/ezs302. Epub 2012 Jul 20.

PMID:
22822104
44.

Super resolution image reconstruction through Bregman iteration using morphologic regularization.

Purkait P, Chanda B.

IEEE Trans Image Process. 2012 Sep;21(9):4029-39. doi: 10.1109/TIP.2012.2201492. Epub 2012 May 25.

PMID:
22652193
45.

Oleic acid-dependent modulation of NITRIC OXIDE ASSOCIATED1 protein levels regulates nitric oxide-mediated defense signaling in Arabidopsis.

Mandal MK, Chandra-Shekara AC, Jeong RD, Yu K, Zhu S, Chanda B, Navarre D, Kachroo A, Kachroo P.

Plant Cell. 2012 Apr;24(4):1654-74. doi: 10.1105/tpc.112.096768. Epub 2012 Apr 6.

46.

Gating transitions in the selectivity filter region of a sodium channel are coupled to the domain IV voltage sensor.

Capes DL, Arcisio-Miranda M, Jarecki BW, French RJ, Chanda B.

Proc Natl Acad Sci U S A. 2012 Feb 14;109(7):2648-53. doi: 10.1073/pnas.1115575109. Epub 2012 Jan 30.

47.

Estimating the voltage-dependent free energy change of ion channels using the median voltage for activation.

Chowdhury S, Chanda B.

J Gen Physiol. 2012 Jan;139(1):3-17. doi: 10.1085/jgp.201110722. Epub 2011 Dec 12.

48.

Glycerol-3-phosphate and systemic immunity.

Mandal MK, Chanda B, Xia Y, Yu K, Sekine KT, Gao QM, Selote D, Kachroo A, Kachroo P.

Plant Signal Behav. 2011 Nov;6(11):1871-4. doi: 10.4161/psb.6.11.17901. Epub 2011 Nov 1.

49.

Glycerol-3-phosphate is a critical mobile inducer of systemic immunity in plants.

Chanda B, Xia Y, Mandal MK, Yu K, Sekine KT, Gao QM, Selote D, Hu Y, Stromberg A, Navarre D, Kachroo A, Kachroo P.

Nat Genet. 2011 May;43(5):421-7. doi: 10.1038/ng.798. Epub 2011 Mar 27.

PMID:
21441932
50.

Deconstructing thermodynamic parameters of a coupled system from site-specific observables.

Chowdhury S, Chanda B.

Proc Natl Acad Sci U S A. 2010 Nov 2;107(44):18856-61. doi: 10.1073/pnas.1003609107. Epub 2010 Oct 13.

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