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Items: 1 to 50 of 58


Analyses of inter-individual variations of sperm DNA methylation and their potential implications in cattle.

Liu S, Fang L, Zhou Y, Santos DJA, Xiang R, Daetwyler HD, Chamberlain AJ, Cole JB, Li CJ, Yu Y, Ma L, Zhang S, Liu GE.

BMC Genomics. 2019 Nov 21;20(1):888. doi: 10.1186/s12864-019-6228-6.


Quantifying the contribution of sequence variants with regulatory and evolutionary significance to 34 bovine complex traits.

Xiang R, Berg IVD, MacLeod IM, Hayes BJ, Prowse-Wilkins CP, Wang M, Bolormaa S, Liu Z, Rochfort SJ, Reich CM, Mason BA, Vander Jagt CJ, Daetwyler HD, Lund MS, Chamberlain AJ, Goddard ME.

Proc Natl Acad Sci U S A. 2019 Sep 24;116(39):19398-19408. doi: 10.1073/pnas.1904159116. Epub 2019 Sep 9.


Overlap between eQTL and QTL associated with production traits and fertility in dairy cattle.

van den Berg I, Hayes BJ, Chamberlain AJ, Goddard ME.

BMC Genomics. 2019 Apr 15;20(1):291. doi: 10.1186/s12864-019-5656-7.


Survey of allele specific expression in bovine muscle.

Guillocheau GM, El Hou A, Meersseman C, Esquerré D, Rebours E, Letaief R, Simao M, Hypolite N, Bourneuf E, Bruneau N, Vaiman A, Vander Jagt CJ, Chamberlain AJ, Rocha D.

Sci Rep. 2019 Mar 12;9(1):4297. doi: 10.1038/s41598-019-40781-6.


Fine-mapping sequence mutations with a major effect on oligosaccharide content in bovine milk.

Liu Z, Wang T, Pryce JE, MacLeod IM, Hayes BJ, Chamberlain AJ, Jagt CV, Reich CM, Mason BA, Rochfort S, Cocks BG.

Sci Rep. 2019 Feb 14;9(1):2137. doi: 10.1038/s41598-019-38488-9.


Accuracy of imputation to whole-genome sequence in sheep.

Bolormaa S, Chamberlain AJ, Khansefid M, Stothard P, Swan AA, Mason B, Prowse-Wilkins CP, Duijvesteijn N, Moghaddar N, van der Werf JH, Daetwyler HD, MacLeod IM.

Genet Sel Evol. 2019 Jan 17;51(1):1. doi: 10.1186/s12711-018-0443-5.


Methods of melanoma detection and of skin monitoring for individuals at high risk of melanoma: new Australian clinical practice.

Adler NR, Kelly JW, Guitera P, Menzies SW, Chamberlain AJ, Fishburn P, Button-Sloan AE, Heal C, Soyer HP, Thompson JF.

Med J Aust. 2019 Jan;210(1):41-47. doi: 10.5694/mja2.12033. Epub 2018 Dec 2.


Sequencing the mosaic genome of Brahman cattle identifies historic and recent introgression including polled.

Koufariotis L, Hayes BJ, Kelly M, Burns BM, Lyons R, Stothard P, Chamberlain AJ, Moore S.

Sci Rep. 2018 Dec 10;8(1):17761. doi: 10.1038/s41598-018-35698-5.


Comparing allele specific expression and local expression quantitative trait loci and the influence of gene expression on complex trait variation in cattle.

Khansefid M, Pryce JE, Bolormaa S, Chen Y, Millen CA, Chamberlain AJ, Vander Jagt CJ, Goddard ME.

BMC Genomics. 2018 Nov 3;19(1):793. doi: 10.1186/s12864-018-5181-0.


Genome variants associated with RNA splicing variations in bovine are extensively shared between tissues.

Xiang R, Hayes BJ, Vander Jagt CJ, MacLeod IM, Khansefid M, Bowman PJ, Yuan Z, Prowse-Wilkins CP, Reich CM, Mason BA, Garner JB, Marett LC, Chen Y, Bolormaa S, Daetwyler HD, Chamberlain AJ, Goddard ME.

BMC Genomics. 2018 Jul 4;19(1):521. doi: 10.1186/s12864-018-4902-8.


Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits.

Wang M, Hancock TP, Chamberlain AJ, Vander Jagt CJ, Pryce JE, Cocks BG, Goddard ME, Hayes BJ.

BMC Genomics. 2018 May 24;19(1):395. doi: 10.1186/s12864-018-4800-0.


Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals.

Bouwman AC, Daetwyler HD, Chamberlain AJ, Ponce CH, Sargolzaei M, Schenkel FS, Sahana G, Govignon-Gion A, Boitard S, Dolezal M, Pausch H, Brøndum RF, Bowman PJ, Thomsen B, Guldbrandtsen B, Lund MS, Servin B, Garrick DJ, Reecy J, Vilkki J, Bagnato A, Wang M, Hoff JL, Schnabel RD, Taylor JF, Vinkhuyzen AAE, Panitz F, Bendixen C, Holm LE, Gredler B, Hozé C, Boussaha M, Sanchez MP, Rocha D, Capitan A, Tribout T, Barbat A, Croiseau P, Drögemüller C, Jagannathan V, Vander Jagt C, Crowley JJ, Bieber A, Purfield DC, Berry DP, Emmerling R, Götz KU, Frischknecht M, Russ I, Sölkner J, Van Tassell CP, Fries R, Stothard P, Veerkamp RF, Boichard D, Goddard ME, Hayes BJ.

Nat Genet. 2018 Mar;50(3):362-367. doi: 10.1038/s41588-018-0056-5. Epub 2018 Feb 19.


Gene expression analysis of blood, liver, and muscle in cattle divergently selected for high and low residual feed intake.

Khansefid M, Millen CA, Chen Y, Pryce JE, Chamberlain AJ, Vander Jagt CJ, Gondro C, Goddard ME.

J Anim Sci. 2017 Nov;95(11):4764-4775. doi: 10.2527/jas2016.1320.


Clinical practice guidelines for the diagnosis and management of melanoma: melanomas that lack classical clinical features.

Mar VJ, Chamberlain AJ, Kelly JW, Murray WK, Thompson JF.

Med J Aust. 2017 Oct 16;207(8):348-350.


New onset vitiligo following commencement of infliximab in Crohn disease.

Luber RP, Chamberlain AJ, Sparrow MP.

Intern Med J. 2017 Aug;47(8):972-973. doi: 10.1111/imj.13498. No abstract available.


Erratum to: Detection and validation of structural variations in bovine whole-genome sequence data.

Chen L, Chamberlain AJ, Reich CM, Daetwyler HD, Hayes BJ.

Genet Sel Evol. 2017 Mar 3;49(1):31. doi: 10.1186/s12711-017-0305-6. No abstract available.


Detection and validation of structural variations in bovine whole-genome sequence data.

Chen L, Chamberlain AJ, Reich CM, Daetwyler HD, Hayes BJ.

Genet Sel Evol. 2017 Jan 25;49(1):13. doi: 10.1186/s12711-017-0286-5. Erratum in: Genet Sel Evol. 2017 Mar 3;49(1):31.


Genetics of complex traits: prediction of phenotype, identification of causal polymorphisms and genetic architecture.

Goddard ME, Kemper KE, MacLeod IM, Chamberlain AJ, Hayes BJ.

Proc Biol Sci. 2016 Jul 27;283(1835). pii: 20160569. doi: 10.1098/rspb.2016.0569. Review.


Exploiting biological priors and sequence variants enhances QTL discovery and genomic prediction of complex traits.

MacLeod IM, Bowman PJ, Vander Jagt CJ, Haile-Mariam M, Kemper KE, Chamberlain AJ, Schrooten C, Hayes BJ, Goddard ME.

BMC Genomics. 2016 Feb 27;17:144. doi: 10.1186/s12864-016-2443-6.


Targeted imputation of sequence variants and gene expression profiling identifies twelve candidate genes associated with lactation volume, composition and calving interval in dairy cattle.

Raven LA, Cocks BG, Kemper KE, Chamberlain AJ, Vander Jagt CJ, Goddard ME, Hayes BJ.

Mamm Genome. 2016 Feb;27(1-2):81-97. doi: 10.1007/s00335-015-9613-8. Epub 2015 Nov 27.


Differentially Expressed Genes in Endometrium and Corpus Luteum of Holstein Cows Selected for High and Low Fertility Are Enriched for Sequence Variants Associated with Fertility.

Moore SG, Pryce JE, Hayes BJ, Chamberlain AJ, Kemper KE, Berry DP, McCabe M, Cormican P, Lonergan P, Fair T, Butler ST.

Biol Reprod. 2016 Jan;94(1):19. doi: 10.1095/biolreprod.115.132951. Epub 2015 Nov 25.


Extensive variation between tissues in allele specific expression in an outbred mammal.

Chamberlain AJ, Vander Jagt CJ, Hayes BJ, Khansefid M, Marett LC, Millen CA, Nguyen TT, Goddard ME.

BMC Genomics. 2015 Nov 23;16:993. doi: 10.1186/s12864-015-2174-0.


Subungual fibro-osseous pseudotumour of the toe.

Meani RE, Bloom RJ, Battye S, Chamberlain AJ.

Australas J Dermatol. 2016 May;57(2):e57-60. doi: 10.1111/ajd.12346. Epub 2015 May 20.


Improved precision of QTL mapping using a nonlinear Bayesian method in a multi-breed population leads to greater accuracy of across-breed genomic predictions.

Kemper KE, Reich CM, Bowman PJ, Vander Jagt CJ, Chamberlain AJ, Mason BA, Hayes BJ, Goddard ME.

Genet Sel Evol. 2015 Apr 17;47:29. doi: 10.1186/s12711-014-0074-4.


Dermoscopic features of clear cell acanthoma: five new cases and a review of existing published cases.

Lyons G, Chamberlain AJ, Kelly JW.

Australas J Dermatol. 2015 Aug;56(3):206-11. doi: 10.1111/ajd.12206. Epub 2014 Dec 13. Review. No abstract available.


Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle.

Daetwyler HD, Capitan A, Pausch H, Stothard P, van Binsbergen R, Brøndum RF, Liao X, Djari A, Rodriguez SC, Grohs C, Esquerré D, Bouchez O, Rossignol MN, Klopp C, Rocha D, Fritz S, Eggen A, Bowman PJ, Coote D, Chamberlain AJ, Anderson C, VanTassell CP, Hulsegge I, Goddard ME, Guldbrandtsen B, Lund MS, Veerkamp RF, Boichard DA, Fries R, Hayes BJ.

Nat Genet. 2014 Aug;46(8):858-65. doi: 10.1038/ng.3034. Epub 2014 Jul 13.


Clinical and dermoscopic characteristics of Merkel cell carcinoma.

Jalilian C, Chamberlain AJ, Haskett M, Rosendahl C, Goh M, Beck H, Keir J, Varghese P, Mar A, Hosking S, Hussain I, Rich M, McLean C, Kelly JW.

Br J Dermatol. 2013 Aug;169(2):294-7. doi: 10.1111/bjd.12376.


Photographic artefact simulating regressing melanocytic lesion: a potential pitfall of total body photography.

Edwards SP, Chamberlain AJ.

Australas J Dermatol. 2012 Nov;53(4):314-5. doi: 10.1111/j.1440-0960.2012.00913.x. No abstract available.


Validation of single nucleotide polymorphisms associated with milk production traits in dairy cattle.

Chamberlain AJ, Hayes BJ, Savin K, Bolormaa S, McPartlan HC, Bowman PJ, Van der Jagt C, MacEachern S, Goddard ME.

J Dairy Sci. 2012 Feb;95(2):864-75. doi: 10.3168/jds.2010-3786.


Genetic architecture of complex traits and accuracy of genomic prediction: coat colour, milk-fat percentage, and type in Holstein cattle as contrasting model traits.

Hayes BJ, Pryce J, Chamberlain AJ, Bowman PJ, Goddard ME.

PLoS Genet. 2010 Sep 23;6(9):e1001139. doi: 10.1371/journal.pgen.1001139.


PlayStation purpura.

Robertson SJ, Leonard J, Chamberlain AJ.

Australas J Dermatol. 2010 Aug;51(3):220-2. doi: 10.1111/j.1440-0960.2010.00652.x.


A validated genome-wide association study in 2 dairy cattle breeds for milk production and fertility traits using variable length haplotypes.

Pryce JE, Bolormaa S, Chamberlain AJ, Bowman PJ, Savin K, Goddard ME, Hayes BJ.

J Dairy Sci. 2010 Jul;93(7):3331-45. doi: 10.3168/jds.2009-2893.


Power of a genome scan to detect and locate quantitative trait loci in cattle using dense single nucleotide polymorphisms.

MacLeod IM, Hayes BJ, Savin KW, Chamberlain AJ, McPartlan HC, Goddard ME.

J Anim Breed Genet. 2010 Apr;127(2):133-42. doi: 10.1111/j.1439-0388.2009.00831.x.


A validated genome wide association study to breed cattle adapted to an environment altered by climate change.

Hayes BJ, Bowman PJ, Chamberlain AJ, Savin K, van Tassell CP, Sonstegard TS, Goddard ME.

PLoS One. 2009 Aug 18;4(8):e6676. doi: 10.1371/journal.pone.0006676.


Invited review: Genomic selection in dairy cattle: progress and challenges.

Hayes BJ, Bowman PJ, Chamberlain AJ, Goddard ME.

J Dairy Sci. 2009 Feb;92(2):433-43. doi: 10.3168/jds.2008-1646. Review. Erratum in: J Dairy Sci. 2009 Mar;92(3):1313.


A genome map of divergent artificial selection between Bos taurus dairy cattle and Bos taurus beef cattle.

Hayes BJ, Chamberlain AJ, Maceachern S, Savin K, McPartlan H, MacLeod I, Sethuraman L, Goddard ME.

Anim Genet. 2009 Apr;40(2):176-84. doi: 10.1111/j.1365-2052.2008.01815.x. Epub 2008 Dec 5.


Dermatoscopy aids in the diagnosis of the solitary red scaly patch or plaque-features distinguishing superficial basal cell carcinoma, intraepidermal carcinoma, and psoriasis.

Pan Y, Chamberlain AJ, Bailey M, Chong AH, Haskett M, Kelly JW.

J Am Acad Dermatol. 2008 Aug;59(2):268-74. doi: 10.1016/j.jaad.2008.05.013. Epub 2008 Jun 11.


Accuracy of marker-assisted selection with single markers and marker haplotypes in cattle.

Hayes BJ, Chamberlain AJ, McPartlan H, Macleod I, Sethuraman L, Goddard ME.

Genet Res. 2007 Aug;89(4):215-20. doi: 10.1017/S0016672307008865.


Genes influencing milk production traits predominantly affect one of four biological pathways.

Chamberlain AJ, McPartlan HC, Goddard ME.

Genet Sel Evol. 2008 Jan-Feb;40(1):79-89. Epub 2007 Dec 21.


The number of loci that affect milk production traits in dairy cattle.

Chamberlain AJ, McPartlan HC, Goddard ME.

Genetics. 2007 Oct;177(2):1117-23. Epub 2007 Aug 24.


Use of dermoscopy in Australia.

Chamberlain AJ, Kelly JW.

Med J Aust. 2007 Aug 20;187(4):252-3. No abstract available.


Partial biopsy of pigmented lesions: proceed with caution.

Chamberlain AJ, Kelly JW.

Australas J Dermatol. 2006 Feb;47(1):73-4; author reply 74-5. No abstract available. Erratum in: Australas J Dermatol. 2006 Nov;47(4):308.


Simple modification to the punch biopsy technique to minimize handling and crush artefact.

Chamberlain AJ, Lee AY, Sinclair RD.

Australas J Dermatol. 2005 Nov;46(4):282-3.


Acquired periungal arteriovenous tumour (cirsoid aneurysm).

Chamberlain AJ, Millard PR, Pryce DW, Dawber RP.

J Eur Acad Dermatol Venereol. 2005 Mar;19(2):255-6. No abstract available.


Tumid lupus erythematosus occurring following highly active antiretroviral therapy for HIV infection: a manifestation of immune restoration.

Chamberlain AJ, Hollowood K, Turner RJ, Byren I.

J Am Acad Dermatol. 2004 Nov;51(5 Suppl):S161-5. Erratum in: J Am Acad Dermatol. 2004 Dec;51(6):1040.


Cutaneous reactions to interferon and ribavirin.

Chamberlain AJ, Poon E.

Intern Med J. 2004 Aug;34(8):519. No abstract available.


Nodular melanomas and older men: a major challenge for community surveillance programs.

Chamberlain AJ, Kelly JW.

Med J Aust. 2004 Apr 19;180(8):432. No abstract available.


Paraneoplastic immunobullous disease with an epidermolysis bullosa acquisita phenotype: two cases demonstrating remission with treatment of gynaecological malignancy.

Chamberlain AJ, Cooper SM, Allen J, Dean D, Baxter KF, Goodfield MJ, Wojnarowska F.

Australas J Dermatol. 2004 May;45(2):136-9.


Nodular melanoma. No longer as simple as ABC.

Kelly JW, Chamberlain AJ, Staples MP, McAvoy B.

Aust Fam Physician. 2003 Sep;32(9):706-9.


Significance of iron status in hair loss in women.

Chamberlain AJ, Dawber RP.

Br J Dermatol. 2003 Aug;149(2):428. No abstract available.


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