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Rapid Atrial Pacing Promotes Atrial Fibrillation Substrate in Unanesthetized Instrumented Rats.

Mulla W, Hajaj B, Elyagon S, Mor M, Gillis R, Murninkas M, Klapper-Goldstein H, Plaschkes I, Chalifa-Caspi V, Etzion S, Etzion Y.

Front Physiol. 2019 Sep 20;10:1218. doi: 10.3389/fphys.2019.01218. eCollection 2019.


A real-time PCR for specific detection of the Legionella pneumophila serogroup 1 ST1 complex.

Ginevra C, Chastang J, David S, Mentasti M, Yakunin E, Chalker VJ, Chalifa-Caspi V, Valinsky L, Jarraud S, Moran-Gilad J; ESCMID Study Group for Legionella Infections (ESGLI).

Clin Microbiol Infect. 2019 Sep 13. pii: S1198-743X(19)30487-2. doi: 10.1016/j.cmi.2019.09.002. [Epub ahead of print]


Aging promotes reorganization of the CD4 T cell landscape toward extreme regulatory and effector phenotypes.

Elyahu Y, Hekselman I, Eizenberg-Magar I, Berner O, Strominger I, Schiller M, Mittal K, Nemirovsky A, Eremenko E, Vital A, Simonovsky E, Chalifa-Caspi V, Friedman N, Yeger-Lotem E, Monsonego A.

Sci Adv. 2019 Aug 21;5(8):eaaw8330. doi: 10.1126/sciadv.aaw8330. eCollection 2019 Aug.


Production of WW males lacking the masculine Z chromosome and mining the Macrobrachium rosenbergii genome for sex-chromosomes.

Levy T, Rosen O, Manor R, Dotan S, Azulay D, Abramov A, Sklarz MY, Chalifa-Caspi V, Baruch K, Shechter A, Sagi A.

Sci Rep. 2019 Aug 27;9(1):12408. doi: 10.1038/s41598-019-47509-6.


Metabolomics reveals novel insight on dormancy of aquatic invertebrate encysted embryos.

Rozema E, Kierszniowska S, Almog-Gabai O, Wilson EG, Choi YH, Verpoorte R, Hamo R, Chalifa-Caspi V, Assaraf YG, Lubzens E.

Sci Rep. 2019 Jun 20;9(1):8878. doi: 10.1038/s41598-019-45061-x.


Streptococcus pneumoniae Cell Wall-Localized Trigger Factor Elicits a Protective Immune Response and Contributes to Bacterial Adhesion to the Host.

Cohen A, Troib S, Dotan S, Najmuldeen H, Yesilkaya H, Kushnir T, Shagan M, Portnoi M, Nachmani H, Benisty R, Tal M, Ellis R, Chalifa-Caspi V, Dagan R, Nebenzahl YM.

Sci Rep. 2019 Mar 12;9(1):4295. doi: 10.1038/s41598-019-40779-0.


CSBFinder: discovery of colinear syntenic blocks across thousands of prokaryotic genomes.

Svetlitsky D, Dagan T, Chalifa-Caspi V, Ziv-Ukelson M.

Bioinformatics. 2019 May 15;35(10):1634-1643. doi: 10.1093/bioinformatics/bty861.


Molecular Mode of Action of Asteriscus graveolens as an Anticancer Agent.

Tayeh Z, Dudai N, Schechter A, Chalifa-Caspi V, Barak S, Ofir R.

Int J Mol Sci. 2018 Jul 24;19(8). pii: E2162. doi: 10.3390/ijms19082162.


Synergistic effects of abiotic stresses in plants: a case study of nitrogen limitation and saturating light intensity in Arabidopsis thaliana.

Cohen I, Rapaport T, Chalifa-Caspi V, Rachmilevitch S.

Physiol Plant. 2019 Apr;165(4):755-767. doi: 10.1111/ppl.12765. Epub 2018 Jul 20.


Flavin Reductase Contributes to Pneumococcal Virulence by Protecting from Oxidative Stress and Mediating Adhesion and Elicits Protection Against Pneumococcal Challenge.

Morozov GI, Porat N, Kushnir T, Najmuldeen H, Adawi A, Chalifa-Caspi V, Benisty R, Ohayon A, Liron O, Azriel S, Malka I, Dotan S, Portnoi M, Piotrowski AA, Kafka D, Hajaj B, Fishilevich T, Shagan M, Tal M, Ellis R, Morrison DA, Mitchell AM, Mitchell TJ, Dagan R, Yesilkaya H, Nebenzahl YM.

Sci Rep. 2018 Jan 10;8(1):314. doi: 10.1038/s41598-017-18645-8.


A Biclique Approach to Reference-Anchored Gene Blocks and Its Applications to Genomic Islands.

Benshahar A, Chalifa-Caspi V, Hermelin D, Ziv-Ukelson M.

J Comput Biol. 2018 Feb;25(2):214-235. doi: 10.1089/cmb.2017.0108. Epub 2017 Oct 13.


Dormancy in Embryos: Insight from Hydrated Encysted Embryos of an Aquatic Invertebrate.

Ziv T, Chalifa-Caspi V, Denekamp N, Plaschkes I, Kierszniowska S, Blais I, Admon A, Lubzens E.

Mol Cell Proteomics. 2017 Oct;16(10):1746-1769. doi: 10.1074/mcp.RA117.000109. Epub 2017 Jul 20.


The dead, hardened floral bracts of dispersal units of wild wheat function as storage for active hydrolases and in enhancing seedling vigor.

Raviv B, Granot G, Chalifa-Caspi V, Grafi G.

PLoS One. 2017 May 11;12(5):e0177537. doi: 10.1371/journal.pone.0177537. eCollection 2017.


Clinical and molecular epidemiology of Acinetobacter baumannii bloodstream infections in an endemic setting.

Marchaim D, Levit D, Zigron R, Gordon M, Lazarovitch T, Carrico JA, Chalifa-Caspi V, Moran-Gilad J.

Future Microbiol. 2017 Mar;12:271-283. doi: 10.2217/fmb-2016-0158. Epub 2017 Feb 24.


A bioinformatics tool for ensuring the backwards compatibility of Legionella pneumophila typing in the genomic era.

Gordon M, Yakunin E, Valinsky L, Chalifa-Caspi V, Moran-Gilad J; ESCMID Study Group for Legionella Infections.

Clin Microbiol Infect. 2017 May;23(5):306-310. doi: 10.1016/j.cmi.2017.01.002. Epub 2017 Jan 7.


A transcriptional time-course analysis of oral vs. aboral whole-body regeneration in the Sea anemone Nematostella vectensis.

Schaffer AA, Bazarsky M, Levy K, Chalifa-Caspi V, Gat U.

BMC Genomics. 2016 Sep 7;17:718. doi: 10.1186/s12864-016-3027-1.


Streptococcus pneumoniae Cell-Wall-Localized Phosphoenolpyruvate Protein Phosphotransferase Can Function as an Adhesin: Identification of Its Host Target Molecules and Evaluation of Its Potential as a Vaccine.

Mizrachi Nebenzahl Y, Blau K, Kushnir T, Shagan M, Portnoi M, Cohen A, Azriel S, Malka I, Adawi A, Kafka D, Dotan S, Guterman G, Troib S, Fishilevich T, Gershoni JM, Braiman A, Mitchell AM, Mitchell TJ, Porat N, Goliand I, Chalifa Caspi V, Swiatlo E, Tal M, Ellis R, Elia N, Dagan R.

PLoS One. 2016 Mar 18;11(3):e0150320. doi: 10.1371/journal.pone.0150320. eCollection 2016.


The Development of a Novel qPCR Assay-Set for Identifying Fecal Contamination Originating from Domestic Fowls and Waterfowl in Israel.

Ohad S, Ben-Dor S, Prilusky J, Kravitz V, Dassa B, Chalifa-Caspi V, Kashi Y, Rorman E.

Front Microbiol. 2016 Feb 17;7:145. doi: 10.3389/fmicb.2016.00145. eCollection 2016.


Correction: Binary Gene Expression Patterning of the Molt Cycle: The Case of Chitin Metabolism.

Abehsera S, Glazer L, Tynyakov J, Plaschkes I, Chalifa-Caspi V, Khalaila I, Aflalo ED, Sagi A.

PLoS One. 2015 Jun 12;10(6):e0130787. doi: 10.1371/journal.pone.0130787. eCollection 2015. No abstract available.


Binary gene expression patterning of the molt cycle: the case of chitin metabolism.

Abehsera S, Glazer L, Tynyakov J, Plaschkes I, Chalifa-Caspi V, Khalaila I, Aflalo ED, Sagi A.

PLoS One. 2015 Apr 28;10(4):e0122602. doi: 10.1371/journal.pone.0122602. eCollection 2014. Erratum in: PLoS One. 2015;10(6):e0130787.


Comparative genomic analysis of clinical and environmental Vibrio vulnificus isolates revealed biotype 3 evolutionary relationships.

Koton Y, Gordon M, Chalifa-Caspi V, Bisharat N.

Front Microbiol. 2015 Jan 15;5:803. doi: 10.3389/fmicb.2014.00803. eCollection 2014.


Draft Genome Sequence of Fish Pathogenic Vibrio vulnificus Biotype 2.

Koton Y, Eghbaria S, Gordon M, Chalifa-Caspi V, Bisharat N.

Genome Announc. 2014 Nov 26;2(6). pii: e01224-14. doi: 10.1128/genomeA.01224-14.


A combination of gene expression ranking and co-expression network analysis increases discovery rate in large-scale mutant screens for novel Arabidopsis thaliana abiotic stress genes.

Ransbotyn V, Yeger-Lotem E, Basha O, Acuna T, Verduyn C, Gordon M, Chalifa-Caspi V, Hannah MA, Barak S.

Plant Biotechnol J. 2015 May;13(4):501-13. doi: 10.1111/pbi.12274. Epub 2014 Nov 5.


Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus).

Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M.

BMC Genomics. 2014 Sep 9;15:774. doi: 10.1186/1471-2164-15-774.


Early and late response of Nematostella vectensis transcriptome to heavy metals.

Elran R, Raam M, Kraus R, Brekhman V, Sher N, Plaschkes I, Chalifa-Caspi V, Lotan T.

Mol Ecol. 2014 Oct;23(19):4722-36. doi: 10.1111/mec.12891. Epub 2014 Sep 12.


Metabolite and transcript profiling of berry skin during fruit development elucidates differential regulation between Cabernet Sauvignon and Shiraz cultivars at branching points in the polyphenol pathway.

Degu A, Hochberg U, Sikron N, Venturini L, Buson G, Ghan R, Plaschkes I, Batushansky A, Chalifa-Caspi V, Mattivi F, Delledonne M, Pezzotti M, Rachmilevitch S, Cramer GR, Fait A.

BMC Plant Biol. 2014 Jul 26;14:188. doi: 10.1186/s12870-014-0188-4.


Inositol-related gene knockouts mimic lithium's effect on mitochondrial function.

Toker L, Bersudsky Y, Plaschkes I, Chalifa-Caspi V, Berry GT, Buccafusca R, Moechars D, Belmaker RH, Agam G.

Neuropsychopharmacology. 2014 Jan;39(2):319-28. doi: 10.1038/npp.2013.194. Epub 2013 Aug 8.


Gene expression analysis reveals functional pathways of glatiramer acetate activation.

Bakshi S, Chalifa-Caspi V, Plaschkes I, Perevozkin I, Gurevich M, Schwartz R.

Expert Opin Ther Targets. 2013 Apr;17(4):351-62. doi: 10.1517/14728222.2013.778829. Epub 2013 Mar 8.


Post-embryonic transcriptomes of the prawn Macrobrachium rosenbergii: multigenic succession through metamorphosis.

Ventura T, Manor R, Aflalo ED, Chalifa-Caspi V, Weil S, Sharabi O, Sagi A.

PLoS One. 2013;8(1):e55322. doi: 10.1371/journal.pone.0055322. Epub 2013 Jan 25.


Genome-wide linkage in a highly consanguineous pedigree reveals two novel loci on chromosome 7 for non-syndromic familial Premature Ovarian Failure.

Caburet S, Zavadakova P, Ben-Neriah Z, Bouhali K, Dipietromaria A, Charon C, Besse C, Laissue P, Chalifa-Caspi V, Christin-Maitre S, Vaiman D, Levi G, Veitia RA, Fellous M.

PLoS One. 2012;7(3):e33412. doi: 10.1371/journal.pone.0033412. Epub 2012 Mar 13.


Primary ciliary dyskinesia caused by homozygous mutation in DNAL1, encoding dynein light chain 1.

Mazor M, Alkrinawi S, Chalifa-Caspi V, Manor E, Sheffield VC, Aviram M, Parvari R.

Am J Hum Genet. 2011 May 13;88(5):599-607. doi: 10.1016/j.ajhg.2011.03.018. Epub 2011 Apr 14.


Plant response to stress meets dedifferentiation.

Grafi G, Chalifa-Caspi V, Nagar T, Plaschkes I, Barak S, Ransbotyn V.

Planta. 2011 Mar;233(3):433-8. doi: 10.1007/s00425-011-1366-3. Epub 2011 Feb 11. Review.


Autosomal recessive hyponatremia due to isolated salt wasting in sweat associated with a mutation in the active site of Carbonic Anhydrase 12.

Muhammad E, Leventhal N, Parvari G, Hanukoglu A, Hanukoglu I, Chalifa-Caspi V, Feinstein Y, Weinbrand J, Jacoby H, Manor E, Nagar T, Beck JC, Sheffield VC, Hershkovitz E, Parvari R.

Hum Genet. 2011 Apr;129(4):397-405. doi: 10.1007/s00439-010-0930-4. Epub 2010 Dec 24.


KinSNP software for homozygosity mapping of disease genes using SNP microarrays.

Amir el-AD, Bartal O, Morad E, Nagar T, Sheynin J, Parvari R, Chalifa-Caspi V.

Hum Genomics. 2010 Aug;4(6):394-401.


African descents are more sensitive than European descents to the antitumor compounds α-hederin and kalopanaxsaponin I.

Feller G, Kugel A, Moonshine D, Chalifa-Caspi V, Scholz M, Prüfer D, Rabinski T, Müller KJ, Ofir R.

Planta Med. 2010 Nov;76(16):1847-51. doi: 10.1055/s-0030-1250061. Epub 2010 Jun 24.


Multi-transcript expression patterns in the gastrolith disk and the hypodermis of the crayfish Cherax quadricarinatus at premolt.

Yudkovski Y, Glazer L, Shechter A, Reinhardt R, Chalifa-Caspi V, Sagi A, Tom M.

Comp Biochem Physiol Part D Genomics Proteomics. 2010 Jun;5(2):171-7. doi: 10.1016/j.cbd.2010.03.010. Epub 2010 Apr 7.


Autosomal-recessive hypophosphatemic rickets is associated with an inactivation mutation in the ENPP1 gene.

Levy-Litan V, Hershkovitz E, Avizov L, Leventhal N, Bercovich D, Chalifa-Caspi V, Manor E, Buriakovsky S, Hadad Y, Goding J, Parvari R.

Am J Hum Genet. 2010 Feb 12;86(2):273-8. doi: 10.1016/j.ajhg.2010.01.010. Epub 2010 Feb 4.


Senescing cells share common features with dedifferentiating cells.

Damri M, Granot G, Ben-Meir H, Avivi Y, Plaschkes I, Chalifa-Caspi V, Wolfson M, Fraifeld V, Grafi G.

Rejuvenation Res. 2009 Dec;12(6):435-43. doi: 10.1089/rej.2009.0887.


Magnesium sulfate treatment alters fetal cerebellar gene expression responses to hypoxia.

Haramati O, Mane R, Molczadzki G, Perez-Polo JR, Chalifa-Caspi V, Golan HM.

Int J Dev Neurosci. 2010 Apr;28(2):207-16. doi: 10.1016/j.ijdevneu.2009.11.001. Epub 2009 Nov 10.


Gene expression microarray profiles of cumulus cells in lean and overweight-obese polycystic ovary syndrome patients.

Kenigsberg S, Bentov Y, Chalifa-Caspi V, Potashnik G, Ofir R, Birk OS.

Mol Hum Reprod. 2009 Feb;15(2):89-103. doi: 10.1093/molehr/gan082. Epub 2009 Jan 13.


Pollution-affected fish hepatic transcriptome and its expression patterns on exposure to cadmium.

Auslander M, Yudkovski Y, Chalifa-Caspi V, Herut B, Ophir R, Reinhardt R, Neumann PM, Tom M.

Mar Biotechnol (NY). 2008 May-Jun;10(3):250-61. doi: 10.1007/s10126-007-9060-y. Epub 2008 Jan 24.


Functional-genomics-based identification of genes that regulate Arabidopsis responses to multiple abiotic stresses.

Kant P, Gordon M, Kant S, Zolla G, Davydov O, Heimer YM, Chalifa-Caspi V, Shaked R, Barak S.

Plant Cell Environ. 2008 Jun;31(6):697-714. doi: 10.1111/j.1365-3040.2008.01779.x. Epub 2008 Mar 4.


Hepatopancreatic multi-transcript expression patterns in the crayfish Cherax quadricarinatus during the moult cycle.

Yudkovski Y, Shechter A, Chalifa-Caspi V, Auslander M, Ophir R, Dauphin-Villemant C, Waterman M, Sagi A, Tom M.

Insect Mol Biol. 2007 Dec;16(6):661-74.


Search for hepatopancreatic ecdysteroid-responsive genes during the crayfish molt cycle: from a single gene to multigenicity.

Shechter A, Tom M, Yudkovski Y, Weil S, Chang SA, Chang ES, Chalifa-Caspi V, Berman A, Sagi A.

J Exp Biol. 2007 Oct;210(Pt 20):3525-37.


Estimating the efficiency of fish cross-species cDNA microarray hybridization.

Cohen R, Chalifa-Caspi V, Williams TD, Auslander M, George SG, Chipman JK, Tom M.

Mar Biotechnol (NY). 2007 Jul-Aug;9(4):491-9. Epub 2007 May 20.


Flamingo cadherin: a putative host receptor for Streptococcus pneumoniae.

Blau K, Portnoi M, Shagan M, Kaganovich A, Rom S, Kafka D, Chalifa Caspi V, Porgador A, Givon-Lavi N, Gershoni JM, Dagan R, Mizrachi Nebenzahl Y.

J Infect Dis. 2007 Jun 15;195(12):1828-37. Epub 2007 May 3.


Longevity network: construction and implications.

Budovsky A, Abramovich A, Cohen R, Chalifa-Caspi V, Fraifeld V.

Mech Ageing Dev. 2007 Jan;128(1):117-24. Epub 2006 Nov 20. Review.


Insulin and gender: an insulin-like gene expressed exclusively in the androgenic gland of the male crayfish.

Manor R, Weil S, Oren S, Glazer L, Aflalo ED, Ventura T, Chalifa-Caspi V, Lapidot M, Sagi A.

Gen Comp Endocrinol. 2007 Jan 15;150(2):326-36. Epub 2006 Nov 13.


Epigen, the last ligand of ErbB receptors, reveals intricate relationships between affinity and mitogenicity.

Kochupurakkal BS, Harari D, Di-Segni A, Maik-Rachline G, Lyass L, Gur G, Kerber G, Citri A, Lavi S, Eilam R, Chalifa-Caspi V, Eshhar Z, Pikarsky E, Pinkas-Kramarski R, Bacus SS, Yarden Y.

J Biol Chem. 2005 Mar 4;280(9):8503-12. Epub 2004 Dec 17.


Glycolytic enzymes associated with the cell surface of Streptococcus pneumoniae are antigenic in humans and elicit protective immune responses in the mouse.

Ling E, Feldman G, Portnoi M, Dagan R, Overweg K, Mulholland F, Chalifa-Caspi V, Wells J, Mizrachi-Nebenzahl Y.

Clin Exp Immunol. 2004 Nov;138(2):290-8.

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