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An intrinsic association between olfactory identification and spatial memory in humans.

Dahmani L, Patel RM, Yang Y, Chakravarty MM, Fellows LK, Bohbot VD.

Nat Commun. 2018 Oct 16;9(1):4162. doi: 10.1038/s41467-018-06569-4.


Modeling and prediction of clinical symptom trajectories in Alzheimer's disease using longitudinal data.

Bhagwat N, Viviano JD, Voineskos AN, Chakravarty MM; Alzheimer’s Disease Neuroimaging Initiative.

PLoS Comput Biol. 2018 Sep 14;14(9):e1006376. doi: 10.1371/journal.pcbi.1006376. eCollection 2018 Sep.


Clarifying associations between cortical thickness, subcortical structures, and a comprehensive assessment of clinical insight in enduring schizophrenia.

Béland S, Makowski C, Konsztowicz S, Buchy L, Chakravarty MM, Lepage M.

Schizophr Res. 2018 Aug 24. pii: S0920-9964(18)30516-4. doi: 10.1016/j.schres.2018.08.024. [Epub ahead of print]


Polygenic Risk and Neural Substrates of Attention-Deficit/Hyperactivity Disorder Symptoms in Youths With a History of Mild Traumatic Brain Injury.

Stojanovski S, Felsky D, Viviano JD, Shahab S, Bangali R, Burton CL, Devenyi GA, O'Donnell LJ, Szatmari P, Chakravarty MM, Ameis S, Schachar R, Voineskos AN, Wheeler AL.

Biol Psychiatry. 2018 Jul 12. pii: S0006-3223(18)31669-X. doi: 10.1016/j.biopsych.2018.06.024. [Epub ahead of print]


Early-in-life neuroanatomical and behavioural trajectories in a triple transgenic model of Alzheimer's disease.

Kong V, Devenyi GA, Gallino D, Ayranci G, Germann J, Rollins C, Chakravarty MM.

Brain Struct Funct. 2018 Sep;223(7):3365-3382. doi: 10.1007/s00429-018-1691-4. Epub 2018 Jun 13.


Warping an atlas derived from serial histology to 5 high-resolution MRIs.

Tullo S, Devenyi GA, Patel R, Park MTM, Collins DL, Chakravarty MM.

Sci Data. 2018 Jun 19;5:180107. doi: 10.1038/sdata.2018.107.


Deep Brain Stimulation Targeting the Fornix for Mild Alzheimer Dementia (the ADvance Trial): A Two Year Follow-up Including Results of Delayed Activation.

Leoutsakos JS, Yan H, Anderson WS, Asaad WF, Baltuch G, Burke A, Chakravarty MM, Drake KE, Foote KD, Fosdick L, Giacobbe P, Mari Z, McAndrews MP, Munro CA, Oh ES, Okun MS, Pendergrass JC, Ponce FA, Rosenberg PB, Sabbagh MN, Salloway S, Tang-Wai DF, Targum SD, Wolk D, Lozano AM, Smith GS, Lyketsos CG.

J Alzheimers Dis. 2018;64(2):597-606. doi: 10.3233/JAD-180121.


TSPO expression and brain structure in the psychosis spectrum.

Hafizi S, Guma E, Koppel A, Da Silva T, Kiang M, Houle S, Wilson AA, Rusjan PM, Chakravarty MM, Mizrahi R.

Brain Behav Immun. 2018 Jun 12. pii: S0889-1591(18)30225-3. doi: 10.1016/j.bbi.2018.06.009. [Epub ahead of print]


White matter injury in term neonates with congenital heart diseases: Topology & comparison with preterm newborns.

Guo T, Chau V, Peyvandi S, Latal B, McQuillen PS, Knirsch W, Synnes A, Feldmann M, Naef N, Chakravarty MM, De Petrillo A, Duerden EG, Barkovich AJ, Miller SP.

Neuroimage. 2018 Jun 15. pii: S1053-8119(18)30511-1. doi: 10.1016/j.neuroimage.2018.06.004. [Epub ahead of print]


Normative brain size variation and brain shape diversity in humans.

Reardon PK, Seidlitz J, Vandekar S, Liu S, Patel R, Park MTM, Alexander-Bloch A, Clasen LS, Blumenthal JD, Lalonde FM, Giedd JN, Gur RC, Gur RE, Lerch JP, Chakravarty MM, Satterthwaite TD, Shinohara RT, Raznahan A.

Science. 2018 Jun 15;360(6394):1222-1227. doi: 10.1126/science.aar2578. Epub 2018 May 31.


Heritability estimates of cortical anatomy: The influence and reliability of different estimation strategies.

Patel S, Patel R, Park MTM, Masellis M, Knight J, Chakravarty MM.

Neuroimage. 2018 Sep;178:78-91. doi: 10.1016/j.neuroimage.2018.05.014. Epub 2018 May 6.


Regional brain volume changes following chronic antipsychotic administration are mediated by the dopamine D2 receptor.

Guma E, Rocchetti J, Devenyi GA, Tanti A, Mathieu A, Lerch JP, Elgbeili G, Courcot B, Mechawar N, Chakravarty MM, Giros B.

Neuroimage. 2018 Aug 1;176:226-238. doi: 10.1016/j.neuroimage.2018.04.054. Epub 2018 Apr 26.


A multicohort, longitudinal study of cerebellar development in attention deficit hyperactivity disorder.

Shaw P, Ishii-Takahashi A, Park MT, Devenyi GA, Zibman C, Kasparek S, Sudre G, Mangalmurti A, Hoogman M, Tiemeier H, von Polier G, Shook D, Muetzel R, Chakravarty MM, Konrad K, Durston S, White T.

J Child Psychol Psychiatry. 2018 Oct;59(10):1114-1123. doi: 10.1111/jcpp.12920. Epub 2018 Apr 25.


Neuroanatomical phenotypes in mental illness: identifying convergent and divergent cortical phenotypes across autism, ADHD and schizophrenia.

Park MTM, Raznahan A, Shaw P, Gogtay N, Lerch JP, Chakravarty MM.

J Psychiatry Neurosci. 2018 May;43(3):201-212.


Corrigendum to "Hippocampus and amygdala volumes from magnetic resonance images in children: Assessing accuracy of FreeSurfer and FSL against manual segmentation"[NeuroImage 129 (2016) 1-14].

Schoemaker D, Buss C, Head K, Sandman CA, Davis EP, Chakravarty MM, Gauthier S, Pruessner JC.

Neuroimage. 2018 Jun;173:1-2. doi: 10.1016/j.neuroimage.2018.02.009. Epub 2018 Feb 21. No abstract available.


Nutrient Intake in the First Two Weeks of Life and Brain Growth in Preterm Neonates.

Schneider J, Fischer Fumeaux CJ, Duerden EG, Guo T, Foong J, Graz MB, Hagmann P, Chakravarty MM, Hüppi PS, Beauport L, Truttmann AC, Miller SP.

Pediatrics. 2018 Mar;141(3). pii: e20172169. doi: 10.1542/peds.2017-2169. Epub 2018 Feb 13.


Striatal neurometabolite levels in patients with schizophrenia undergoing long-term antipsychotic treatment: A proton magnetic resonance spectroscopy and reliability study.

Plitman E, Chavez S, Nakajima S, Iwata Y, Chung JK, Caravaggio F, Kim J, Alshehri Y, Chakravarty MM, De Luca V, Remington G, Gerretsen P, Graff-Guerrero A.

Psychiatry Res Neuroimaging. 2018 Mar 30;273:16-24. doi: 10.1016/j.pscychresns.2018.01.004. Epub 2018 Jan 31.


Neuroanatomical phenotypes in mental illness: identifying convergent and divergent cortical phenotypes across autism, ADHD and schizophrenia.

Park MTM, Raznahan A, Shaw P, Gogtay N, Lerch JP, Chakravarty MM.

J Psychiatry Neurosci. 2018 Feb 5;43(2):170094. doi: 10.1503/jpn.170094. [Epub ahead of print]


Neuroanatomical and Symptomatic Sex Differences in Individuals at Clinical High Risk for Psychosis.

Guma E, Devenyi GA, Malla A, Shah J, Chakravarty MM, Pruessner M.

Front Psychiatry. 2017 Dec 22;8:291. doi: 10.3389/fpsyt.2017.00291. eCollection 2017.


Can we accurately classify schizophrenia patients from healthy controls using magnetic resonance imaging and machine learning? A multi-method and multi-dataset study.

Winterburn JL, Voineskos AN, Devenyi GA, Plitman E, de la Fuente-Sandoval C, Bhagwat N, Graff-Guerrero A, Knight J, Chakravarty MM.

Schizophr Res. 2017 Dec 20. pii: S0920-9964(17)30736-3. doi: 10.1016/j.schres.2017.11.038. [Epub ahead of print]


Early Procedural Pain Is Associated with Regionally-Specific Alterations in Thalamic Development in Preterm Neonates.

Duerden EG, Grunau RE, Guo T, Foong J, Pearson A, Au-Young S, Lavoie R, Chakravarty MM, Chau V, Synnes A, Miller SP.

J Neurosci. 2018 Jan 24;38(4):878-886. doi: 10.1523/JNEUROSCI.0867-17.2017. Epub 2017 Dec 18.


Procedural pain and oral glucose in preterm neonates: brain development and sex-specific effects.

Schneider J, Duerden EG, Guo T, Ng K, Hagmann P, Bickle Graz M, Grunau RE, Chakravarty MM, Hüppi PS, Truttmann AC, Miller SP.

Pain. 2018 Mar;159(3):515-525. doi: 10.1097/j.pain.0000000000001123.


Regionally specific changes in the hippocampal circuitry accompany progression of cerebrospinal fluid biomarkers in preclinical Alzheimer's disease.

Tardif CL, Devenyi GA, Amaral RSC, Pelleieux S, Poirier J, Rosa-Neto P, Breitner J, Chakravarty MM; PREVENT-AD Research Group.

Hum Brain Mapp. 2018 Feb;39(2):971-984. doi: 10.1002/hbm.23897. Epub 2017 Nov 21.


Amotivation is associated with smaller ventral striatum volumes in older patients with schizophrenia.

Caravaggio F, Fervaha G, Iwata Y, Plitman E, Chung JK, Nakajima S, Mar W, Gerretsen P, Kim J, Chakravarty MM, Mulsant B, Pollock B, Mamo D, Remington G, Graff-Guerrero A.

Int J Geriatr Psychiatry. 2018 Mar;33(3):523-530. doi: 10.1002/gps.4818. Epub 2017 Nov 7.


Cerebellar anatomical alterations and attention to eyes in autism.

Laidi C, Boisgontier J, Chakravarty MM, Hotier S, d'Albis MA, Mangin JF, Devenyi GA, Delorme R, Bolognani F, Czech C, Bouquet C, Toledano E, Bouvard M, Gras D, Petit J, Mishchenko M, Gaman A, Scheid I, Leboyer M, Zalla T, Houenou J.

Sci Rep. 2017 Sep 20;7(1):12008. doi: 10.1038/s41598-017-11883-w.


Differing Time of Onset of Concurrent TMS-fMRI during Associative Memory Encoding: A Measure of Dynamic Connectivity.

Hawco C, Armony JL, Daskalakis ZJ, Berlim MT, Chakravarty MM, Pike GB, Lepage M.

Front Hum Neurosci. 2017 Aug 14;11:404. doi: 10.3389/fnhum.2017.00404. eCollection 2017.


The Effects of Cortical Hypometabolism and Hippocampal Atrophy on Clinical Trajectories in Mild Cognitive Impairment with Suspected Non-Alzheimer's Pathology: A Brief Report.

Chung JK, Plitman E, Nakajima S, Caravaggio F, Shinagawa S, Iwata Y, Gerretsen P, Kim J, Takeuchi H, Patel R, Chakravarty MM, Strafella A, Graff-Guerrero A; Alzheimer’s Disease Neuroimaging Initiative.

J Alzheimers Dis. 2017;60(2):341-347. doi: 10.3233/JAD-170098.


Linking persistent negative symptoms to amygdala-hippocampus structure in first-episode psychosis.

Makowski C, Bodnar M, Shenker JJ, Malla AK, Joober R, Chakravarty MM, Lepage M.

Transl Psychiatry. 2017 Aug 8;7(8):e1195. doi: 10.1038/tp.2017.168.


The relationship between subcortical brain volume and striatal dopamine D2/3 receptor availability in healthy humans assessed with [11 C]-raclopride and [11 C]-(+)-PHNO PET.

Caravaggio F, Ku Chung J, Plitman E, Boileau I, Gerretsen P, Kim J, Iwata Y, Patel R, Chakravarty MM, Remington G, Graff-Guerrero A.

Hum Brain Mapp. 2017 Nov;38(11):5519-5534. doi: 10.1002/hbm.23744. Epub 2017 Jul 28.


Smaller hippocampal subfield volumes predict verbal associative memory in pediatric brain tumor survivors.

Decker AL, Szulc KU, Bouffet E, Laughlin S, Chakravarty MM, Skocic J, de Medeiros CB, Mabbott DJ.

Hippocampus. 2017 Nov;27(11):1140-1154. doi: 10.1002/hipo.22758. Epub 2017 Jul 20.


Heritability of hippocampal subfield volumes using a twin and non-twin siblings design.

Patel S, Park MTM, Devenyi GA, Patel R, Masellis M, Knight J, Chakravarty MM.

Hum Brain Mapp. 2017 Sep;38(9):4337-4352. doi: 10.1002/hbm.23654. Epub 2017 May 31.


Toward defining deep brain stimulation targets in MNI space: A subcortical atlas based on multimodal MRI, histology and structural connectivity.

Ewert S, Plettig P, Li N, Chakravarty MM, Collins DL, Herrington TM, Kühn AA, Horn A.

Neuroimage. 2018 Apr 15;170:271-282. doi: 10.1016/j.neuroimage.2017.05.015. Epub 2017 May 20. Review.


Hippocampal and Clinical Trajectories of Mild Cognitive Impairment with Suspected Non-Alzheimer's Disease Pathology.

Chung JK, Plitman E, Nakajima S, Caravaggio F, Iwata Y, Gerretsen P, Kim J, Takeuchi H, Shinagawa S, Patel R, Chakravarty MM, Graff-Guerrero A; Alzheimer’s Disease Neuroimaging Initiative.

J Alzheimers Dis. 2017;58(3):747-762. doi: 10.3233/JAD-170201.


A dataset of multi-contrast population-averaged brain MRI atlases of a Parkinson׳s disease cohort.

Xiao Y, Fonov V, Chakravarty MM, Beriault S, Al Subaie F, Sadikot A, Pike GB, Bertrand G, Collins DL.

Data Brief. 2017 Apr 15;12:370-379. doi: 10.1016/j.dib.2017.04.013. eCollection 2017 Jun.


The effect of crack cocaine addiction and age on the microstructure and morphology of the human striatum and thalamus using shape analysis and fast diffusion kurtosis imaging.

Garza-Villarreal EA, Chakravarty MM, Hansen B, Eskildsen SF, Devenyi GA, Castillo-Padilla D, Balducci T, Reyes-Zamorano E, Jespersen SN, Perez-Palacios P, Patel R, Gonzalez-Olvera JJ.

Transl Psychiatry. 2017 May 9;7(5):e1122. doi: 10.1038/tp.2017.92.


Gray-matter structural variability in the human cerebellum: Lobule-specific differences across sex and hemisphere.

Steele CJ, Chakravarty MM.

Neuroimage. 2018 Apr 15;170:164-173. doi: 10.1016/j.neuroimage.2017.04.066. Epub 2017 Apr 28. Review.


Intranasal oxytocin does not modulate jumping to conclusions in schizophrenia: Potential interactions with caudate volume and baseline social functioning.

Caravaggio F, Gerretsen P, Mar W, Chung JK, Plitman E, Nakajima S, Kim J, Iwata Y, Patel R, Chakravarty MM, Remington G, Graff-Guerrero A, Menon M.

Psychoneuroendocrinology. 2017 Jul;81:80-87. doi: 10.1016/j.psyneuen.2017.03.020. Epub 2017 Mar 31.


Concussion induces focal and widespread neuromorphological changes.

Sussman D, da Costa L, Chakravarty MM, Pang EW, Taylor MJ, Dunkley BT.

Neurosci Lett. 2017 May 22;650:52-59. doi: 10.1016/j.neulet.2017.04.026. Epub 2017 Apr 17.


Family history and APOE4 risk for Alzheimer's disease impact the neural correlates of episodic memory by early midlife.

Rajah MN, Wallace LMK, Ankudowich E, Yu EH, Swierkot A, Patel R, Chakravarty MM, Naumova D, Pruessner J, Joober R, Gauthier S, Pasvanis S.

Neuroimage Clin. 2017 Mar 31;14:760-774. doi: 10.1016/j.nicl.2017.03.016. eCollection 2017.


BDNF-Dependent Effects on Amygdala-Cortical Circuitry and Depression Risk in Children and Youth.

Wheeler AL, Felsky D, Viviano JD, Stojanovski S, Ameis SH, Szatmari P, Lerch JP, Chakravarty MM, Voineskos AN.

Cereb Cortex. 2018 May 1;28(5):1760-1770. doi: 10.1093/cercor/bhx086.


Subcortical Shape Changes, Hippocampal Atrophy and Cortical Thinning in Future Alzheimer's Disease Patients.

Kälin AM, Park MT, Chakravarty MM, Lerch JP, Michels L, Schroeder C, Broicher SD, Kollias S, Nitsch RM, Gietl AF, Unschuld PG, Hock C, Leh SE.

Front Aging Neurosci. 2017 Mar 7;9:38. doi: 10.3389/fnagi.2017.00038. eCollection 2017.


Cortical surface-based threshold-free cluster enhancement and cortexwise mediation.

Lett TA, Waller L, Tost H, Veer IM, Nazeri A, Erk S, Brandl EJ, Charlet K, Beck A, Vollstädt-Klein S, Jorde A, Kiefer F, Heinz A, Meyer-Lindenberg A, Chakravarty MM, Walter H.

Hum Brain Mapp. 2017 Jun;38(6):2795-2807. doi: 10.1002/hbm.23563. Epub 2017 Mar 20.


Allometric Analysis Detects Brain Size-Independent Effects of Sex and Sex Chromosome Complement on Human Cerebellar Organization.

Mankiw C, Park MTM, Reardon PK, Fish AM, Clasen LS, Greenstein D, Giedd JN, Blumenthal JD, Lerch JP, Chakravarty MM, Raznahan A.

J Neurosci. 2017 May 24;37(21):5221-5231. doi: 10.1523/JNEUROSCI.2158-16.2017. Epub 2017 Mar 17.


Your algorithm might think the hippocampus grows in Alzheimer's disease: Caveats of longitudinal automated hippocampal volumetry.

Sankar T, Park MTM, Jawa T, Patel R, Bhagwat N, Voineskos AN, Lozano AM, Chakravarty MM; Alzheimer's Disease Neuroimaging Initiative.

Hum Brain Mapp. 2017 Jun;38(6):2875-2896. doi: 10.1002/hbm.23559. Epub 2017 Mar 15.


BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods.

Gorgolewski KJ, Alfaro-Almagro F, Auer T, Bellec P, Capotă M, Chakravarty MM, Churchill NW, Cohen AL, Craddock RC, Devenyi GA, Eklund A, Esteban O, Flandin G, Ghosh SS, Guntupalli JS, Jenkinson M, Keshavan A, Kiar G, Liem F, Raamana PR, Raffelt D, Steele CJ, Quirion PO, Smith RE, Strother SC, Varoquaux G, Wang Y, Yarkoni T, Poldrack RA.

PLoS Comput Biol. 2017 Mar 9;13(3):e1005209. doi: 10.1371/journal.pcbi.1005209. eCollection 2017 Mar.


Evaluating accuracy of striatal, pallidal, and thalamic segmentation methods: Comparing automated approaches to manual delineation.

Makowski C, Béland S, Kostopoulos P, Bhagwat N, Devenyi GA, Malla AK, Joober R, Lepage M, Chakravarty MM.

Neuroimage. 2018 Apr 15;170:182-198. doi: 10.1016/j.neuroimage.2017.02.069. Epub 2017 Mar 1.


Bipolar disorder risk gene FOXO6 modulates negative symptoms in schizophrenia: a neuroimaging genetics study.

Shenker JJ, Sengupta SM, Joober R, Malla A, Chakravarty MM, Lepage M.

J Psychiatry Neurosci. 2017 May;42(3):172-180.


Kynurenic Acid in Schizophrenia: A Systematic Review and Meta-analysis.

Plitman E, Iwata Y, Caravaggio F, Nakajima S, Chung JK, Gerretsen P, Kim J, Takeuchi H, Chakravarty MM, Remington G, Graff-Guerrero A.

Schizophr Bull. 2017 Jul 1;43(4):764-777. doi: 10.1093/schbul/sbw221. Review.


Quantitative assessment of white matter injury in preterm neonates: Association with outcomes.

Guo T, Duerden EG, Adams E, Chau V, Branson HM, Chakravarty MM, Poskitt KJ, Synnes A, Grunau RE, Miller SP.

Neurology. 2017 Feb 14;88(7):614-622. doi: 10.1212/WNL.0000000000003606. Epub 2017 Jan 18.

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