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Items: 1 to 50 of 287

1.

Extracellular Matrix Proteome: Isolation of ECM Proteins for Proteomics Studies.

Elagamey E, Narula K, Chakraborty N, Chakraborty S.

Methods Mol Biol. 2020;2057:155-172. doi: 10.1007/978-1-4939-9790-9_14.

PMID:
31595478
2.

Skeletal adaptations in young male mice after 4 weeks aboard the International Space Station.

Maupin KA, Childress P, Brinker A, Khan F, Abeysekera I, Aguilar IN, Olivos DJ 3rd, Adam G, Savaglio MK, Ganesh V, Gorden R, Mannfeld R, Beckner E, Horan DJ, Robling AG, Chakraborty N, Gautam A, Hammamieh R, Kacena MA.

NPJ Microgravity. 2019 Sep 24;5:21. doi: 10.1038/s41526-019-0081-4. eCollection 2019.

3.

Interaction between Bean and Colletotrichum gloeosporioides: Understanding Through a Biochemical Approach.

Chakraborty N, Mukherjee K, Sarkar A, Acharya K.

Plants (Basel). 2019 Sep 12;8(9). pii: E345. doi: 10.3390/plants8090345.

4.

Multi-omic biomarker identification and validation for diagnosing warzone-related post-traumatic stress disorder.

Dean KR, Hammamieh R, Mellon SH, Abu-Amara D, Flory JD, Guffanti G, Wang K, Daigle BJ Jr, Gautam A, Lee I, Yang R, Almli LM, Bersani FS, Chakraborty N, Donohue D, Kerley K, Kim TK, Laska E, Young Lee M, Lindqvist D, Lori A, Lu L, Misganaw B, Muhie S, Newman J, Price ND, Qin S, Reus VI, Siegel C, Somvanshi PR, Thakur GS, Zhou Y; PTSD Systems Biology Consortium, Hood L, Ressler KJ, Wolkowitz OM, Yehuda R, Jett M, Doyle FJ 3rd, Marmar C.

Mol Psychiatry. 2019 Sep 10. doi: 10.1038/s41380-019-0496-z. [Epub ahead of print]

PMID:
31501510
5.

Genotypes of glycoprotein B gene among the Indian symptomatic neonates with congenital CMV infection.

Sarkar A, Das D, Ansari S, Chatterjee RP, Mishra L, Basu B, Ghosh SK, Bhattacharyay M, Chakraborty N.

BMC Pediatr. 2019 Aug 22;19(1):291. doi: 10.1186/s12887-019-1666-5.

6.

The effects of spaceflight and fracture healing on distant skeletal sites.

Dadwal UC, Maupin KA, Zamarioli A, Tucker A, Harris JS, Fischer JP, Rytlewski JD, Scofield DC, Wininger AE, Bhatti FUR, Alvarez M, Childress PJ, Chakraborty N, Gautam A, Hammamieh R, Kacena MA.

Sci Rep. 2019 Aug 6;9(1):11419. doi: 10.1038/s41598-019-47695-3.

7.

Definitions, measurement and indicator selection for quality of care in abortion.

Darney BG, Kapp N, Andersen K, Baum SE, Blanchard K, Gerdts C, Montagu D, Chakraborty NM, Powell B.

Contraception. 2019 Jul 26. pii: S0010-7824(19)30233-1. doi: 10.1016/j.contraception.2019.07.006. [Epub ahead of print]

PMID:
31356772
8.

Metabolite signatures of grasspea suspension-cultured cells illustrate the complexity of dehydration response.

Rathi D, Pareek A, Zhang T, Pang Q, Chen S, Chakraborty S, Chakraborty N.

Planta. 2019 Sep;250(3):857-871. doi: 10.1007/s00425-019-03211-5. Epub 2019 Jun 15.

PMID:
31203447
9.

Toward the development of a short multi-country person-centered maternity care scale.

Afulani PA, Feeser K, Sudhinaraset M, Aborigo R, Montagu D, Chakraborty N.

Int J Gynaecol Obstet. 2019 Jul;146(1):80-87. doi: 10.1002/ijgo.12827. Epub 2019 May 9.

PMID:
31004349
10.

GCR1 and GPA1 coupling regulates nitrate, cell wall, immunity and light responses in Arabidopsis.

Chakraborty N, Kanyuka K, Jaiswal DK, Kumar A, Arora V, Malik A, Gupta N, Hooley R, Raghuram N.

Sci Rep. 2019 Apr 9;9(1):5838. doi: 10.1038/s41598-019-42084-2.

11.

On the stress-strain alignment in premixed turbulent flames.

Ahmed U, Chakraborty N, Klein M.

Sci Rep. 2019 Mar 25;9(1):5092. doi: 10.1038/s41598-019-41599-y.

12.

Association Between the Quality of Contraceptive Counseling and Method Continuation: Findings From a Prospective Cohort Study in Social Franchise Clinics in Pakistan and Uganda.

Chakraborty NM, Chang K, Bellows B, Grépin KA, Hameed W, Kalamar A, Gul X, Atuyambe L, Montagu D.

Glob Health Sci Pract. 2019 Mar 29;7(1):87-102. doi: 10.9745/GHSP-D-18-00407. Print 2019 Mar 22.

13.

Metabolomic analyses reveal lipid abnormalities and hepatic dysfunction in non-human primate model for Yersinia pestis.

Gautam A, Muhie S, Chakraborty N, Hoke A, Donohue D, Miller SA, Hammamieh R, Jett M.

Metabolomics. 2018 Dec 29;15(1):2. doi: 10.1007/s11306-018-1457-2.

14.

The responses of lungs and adjacent lymph nodes in responding to Yersinia pestis infection: A transcriptomic study using a non-human primate model.

Chakraborty N, Gautam A, Muhie S, Miller SA, Moyler C, Jett M, Hammamieh R.

PLoS One. 2019 Feb 21;14(2):e0209592. doi: 10.1371/journal.pone.0209592. eCollection 2019.

15.

Who Serves the Poor? An Equity Analysis of Public and Private Providers of Family Planning and Child Health Services in Kenya.

Chakraborty NM, Montagu D, Wanderi J, Oduor C.

Front Public Health. 2019 Jan 8;6:374. doi: 10.3389/fpubh.2018.00374. eCollection 2018.

16.

Evaluating Quality of Contraceptive Counseling: An Analysis of the Method Information Index.

Chang KT, Mukanu M, Bellows B, Hameed W, Kalamar AM, Grépin KA, Gul X, Chakraborty NM.

Stud Fam Plann. 2019 Mar;50(1):25-42. doi: 10.1111/sifp.12081. Epub 2019 Jan 21.

17.

Transcriptome profiling illustrates expression signatures of dehydration tolerance in developing grasspea seedlings.

Rathi D, Gayali S, Pareek A, Chakraborty S, Chakraborty N.

Planta. 2019 Sep;250(3):839-855. doi: 10.1007/s00425-018-03082-2. Epub 2019 Jan 10.

PMID:
30627890
18.

Direct Numerical Simulation of Head-On Quenching of Statistically Planar Turbulent Premixed Methane-Air Flames Using a Detailed Chemical Mechanism.

Lai J, Klein M, Chakraborty N.

Flow Turbul Combust. 2018;101(4):1073-1091. doi: 10.1007/s10494-018-9907-5. Epub 2018 Apr 12.

19.

Pyelonephritis Due to Dual Infection in a Diabetic Patient.

Ray J, Paul R, Mallick C, Banerjee AK, Chakraborty N, Sarkar R.

J Assoc Physicians India. 2018 May;66(5):100-1. No abstract available.

PMID:
30477076
20.

Comparative Nuclear Proteomics Analysis Provides Insight into the Mechanism of Signaling and Immune Response to Blast Disease Caused by Magnaporthe oryzae in Rice.

Narula K, Choudhary P, Ghosh S, Elagamey E, Chakraborty N, Chakraborty S.

Proteomics. 2019 Feb;19(3):e1800188. doi: 10.1002/pmic.201800188. Epub 2019 Jan 23.

PMID:
30468014
21.

The impact of canister geometry on chemical biological radiological and nuclear filter performance: A computational fluid dynamics analysis.

Wood SGA, Chakraborty N, Smith MW, Summers MJ, Brewer SA.

J Occup Environ Hyg. 2019 Jan;16(1):41-53. doi: 10.1080/15459624.2018.1533674. Epub 2019 Jan 16.

PMID:
30299217
22.

Dehydration-induced proteomic landscape of mitochondria in chickpea reveals large-scale coordination of key biological processes.

Gayen D, Gayali S, Barua P, Lande NV, Varshney S, Sengupta S, Chakraborty S, Chakraborty N.

J Proteomics. 2019 Feb 10;192:267-279. doi: 10.1016/j.jprot.2018.09.008. Epub 2018 Sep 19.

PMID:
30243939
23.

A DNS Study of Closure Relations for Convection Flux Term in Transport Equation for Mean Reaction Rate in Turbulent Flow.

Lipatnikov AN, Sabelnikov VA, Chakraborty N, Nishiki S, Hasegawa T.

Flow Turbul Combust. 2018;100(1):75-92. doi: 10.1007/s10494-017-9833-y. Epub 2017 Aug 1.

24.

Genotype-independent Agrobacterium rhizogenes-mediated root transformation of chickpea: a rapid and efficient method for reverse genetics studies.

Aggarwal PR, Nag P, Choudhary P, Chakraborty N, Chakraborty S.

Plant Methods. 2018 Jul 6;14:55. doi: 10.1186/s13007-018-0315-6. eCollection 2018.

25.

Quality of care and abortion: beyond safety.

Darney BG, Powell B, Andersen K, Baum SE, Blanchard K, Gerdts C, Montagu D, Chakraborty NM, Kapp N.

BMJ Sex Reprod Health. 2018 May 7. pii: bmjsrh-2018-200060. doi: 10.1136/bmjsrh-2018-200060. [Epub ahead of print] No abstract available.

26.

Search for γ-Ray Line Signals from Dark Matter Annihilations in the Inner Galactic Halo from 10 Years of Observations with H.E.S.S.

Abdallah H, Abramowski A, Aharonian F, Ait Benkhali F, Angüner EO, Arakawa M, Arrieta M, Aubert P, Backes M, Balzer A, Barnard M, Becherini Y, Becker Tjus J, Berge D, Bernhard S, Bernlöhr K, Blackwell R, Böttcher M, Boisson C, Bolmont J, Bonnefoy S, Bordas P, Bregeon J, Brun F, Brun P, Bryan M, Büchele M, Bulik T, Capasso M, Caroff S, Carosi A, Carr J, Casanova S, Cerruti M, Chakraborty N, Chaves RCG, Chen A, Chevalier J, Colafrancesco S, Condon B, Conrad J, Davids ID, Decock J, Deil C, Devin J, deWilt P, Dirson L, Djannati-Ataï A, Domainko W, Donath A, Drury LO, Dutson K, Dyks J, Edwards T, Egberts K, Eger P, Emery G, Ernenwein JP, Eschbach S, Farnier C, Fegan S, Fernandes MV, Fiasson A, Fontaine G, Förster A, Funk S, Füßling M, Gabici S, Gallant YA, Garrigoux T, Gaté F, Giavitto G, Giebels B, Glawion D, Glicenstein JF, Gottschall D, Grondin MH, Hahn J, Haupt M, Hawkes J, Heinzelmann G, Henri G, Hermann G, Hinton JA, Hofmann W, Hoischen C, Holch TL, Holler M, Horns D, Ivascenko A, Iwasaki H, Jacholkowska A, Jamrozy M, Janiak M, Jankowsky D, Jankowsky F, Jingo M, Jouvin L, Jung-Richardt I, Kastendieck MA, Katarzyński K, Katsuragawa M, Katz U, Kerszberg D, Khangulyan D, Khélifi B, King J, Klepser S, Klochkov D, Kluźniak W, Komin N, Kosack K, Krakau S, Kraus M, Krüger PP, Laffon H, Lamanna G, Lau J, Lees JP, Lefaucheur J, Lemière A, Lemoine-Goumard M, Lenain JP, Leser E, Liu R, Lohse T, Lorentz M, López-Coto R, Lypova I, Malyshev D, Marandon V, Marcowith A, Mariaud C, Marx R, Maurin G, Maxted N, Mayer M, Meintjes PJ, Meyer M, Mitchell AMW, Moderski R, Mohamed M, Mohrmann L, Morå K, Moulin E, Murach T, Nakashima S, de Naurois M, Ndiyavala H, Niederwanger F, Niemiec J, Oakes L, O'Brien P, Odaka H, Ohm S, Ostrowski M, Oya I, Padovani M, Panter M, Parsons RD, Pekeur NW, Pelletier G, Perennes C, Petrucci PO, Peyaud B, Piel Q, Pita S, Poireau V, Poon H, Prokhorov D, Prokoph H, Pühlhofer G, Punch M, Quirrenbach A, Raab S, Rauth R, Reimer A, Reimer O, Renaud M, de Los Reyes R, Rieger F, Rinchiuso L, Romoli C, Rowell G, Rudak B, Rulten CB, Sahakian V, Saito S, Sanchez DA, Santangelo A, Sasaki M, Schandri M, Schlickeiser R, Schüssler F, Schulz A, Schwanke U, Schwemmer S, Seglar-Arroyo M, Settimo M, Seyffert AS, Shafi N, Shilon I, Shiningayamwe K, Simoni R, Sol H, Spanier F, Spir-Jacob M, Stawarz Ł, Steenkamp R, Stegmann C, Steppa C, Sushch I, Takahashi T, Tavernet JP, Tavernier T, Taylor AM, Terrier R, Tibaldo L, Tiziani D, Tluczykont M, Trichard C, Tsirou M, Tsuji N, Tuffs R, Uchiyama Y, van der Walt J, van Eldik C, van Rensburg C, van Soelen B, Vasileiadis G, Veh J, Venter C, Viana A, Vincent P, Vink J, Voisin F, Völk HJ, Vuillaume T, Wadiasingh Z, Wagner SJ, Wagner P, Wagner RM, White R, Wierzcholska A, Willmann P, Wörnlein A, Wouters D, Yang R, Zaborov D, Zacharias M, Zanin R, Zdziarski AA, Zech A, Zefi F, Ziegler A, Zorn J, Żywucka N; H.E.S.S. Collaboration.

Phys Rev Lett. 2018 May 18;120(20):201101. doi: 10.1103/PhysRevLett.120.201101.

PMID:
29864326
27.

Variety-specific nutrient acquisition and dehydration-induced proteomic landscape of grasspea (Lathyrus sativus L.).

Rathi D, Pareek A, Gayali S, Chakraborty S, Chakraborty N.

J Proteomics. 2018 Jul 15;183:45-57. doi: 10.1016/j.jprot.2018.05.013. Epub 2018 May 29.

PMID:
29852296
28.

Dehydration-responsive nuclear proteome landscape of chickpea (Cicer arietinum L.) reveals phosphorylation-mediated regulation of stress response.

Barua P, Lande NV, Subba P, Gayen D, Pinto S, Keshava Prasad TS, Chakraborty S, Chakraborty N.

Plant Cell Environ. 2019 Jan;42(1):230-244. doi: 10.1111/pce.13334. Epub 2018 Jun 8.

PMID:
29749054
29.

Effects of Lewis number on the statistics of the invariants of the velocity gradient tensor and local flow topologies in turbulent premixed flames.

Wacks D, Konstantinou I, Chakraborty N.

Proc Math Phys Eng Sci. 2018 Apr;474(2212):20170706. doi: 10.1098/rspa.2017.0706. Epub 2018 Apr 11.

30.

Effects of measurement method and transcript availability on inexperienced raters' stuttering frequency scores.

Chakraborty N, Logan KJ.

J Commun Disord. 2018 Jul - Aug;74:23-34. doi: 10.1016/j.jcomdis.2018.04.006. Epub 2018 Apr 24.

PMID:
29738875
31.

Integrative network analyses of wilt transcriptome in chickpea reveal genotype dependent regulatory hubs in immunity and susceptibility.

Ashraf N, Basu S, Narula K, Ghosh S, Tayal R, Gangisetty N, Biswas S, Aggarwal PR, Chakraborty N, Chakraborty S.

Sci Rep. 2018 Apr 25;8(1):6528. doi: 10.1038/s41598-018-19919-5.

32.

Use of family planning and child health services in the private sector: an equity analysis of 12 DHS surveys.

Chakraborty NM, Sprockett A.

Int J Equity Health. 2018 Apr 24;17(1):50. doi: 10.1186/s12939-018-0763-7.

33.

Altered fecal microbiota composition in all male aggressor-exposed rodent model simulating features of post-traumatic stress disorder.

Gautam A, Kumar R, Chakraborty N, Muhie S, Hoke A, Hammamieh R, Jett M.

J Neurosci Res. 2018 Jul;96(7):1311-1323. doi: 10.1002/jnr.24229. Epub 2018 Apr 6.

PMID:
29633335
34.

Genome-Wide Identification of the Alba Gene Family in Plants and Stress-Responsive Expression of the Rice Alba Genes.

Verma JK, Wardhan V, Singh D, Chakraborty S, Chakraborty N.

Genes (Basel). 2018 Mar 28;9(4). pii: E183. doi: 10.3390/genes9040183.

35.

Encountering epidemic effects of leaf spot disease (Alternaria brassicae) on Aloe vera by fungal biocontrol agents in agrifields-An ecofriendly approach.

Ghosh SK, Banerjee S, Pal S, Chakraborty N.

PLoS One. 2018 Mar 26;13(3):e0193720. doi: 10.1371/journal.pone.0193720. eCollection 2018.

36.

Discharges from an early intervention in psychosis service: The effect of patient characteristics on discharge destination.

Ahmed S, Peters KZ, Chakraborty N.

Early Interv Psychiatry. 2019 Aug;13(4):740-744. doi: 10.1111/eip.12552. Epub 2018 Mar 7.

PMID:
29512312
37.

Development of a surface tension mediated technique for dry stabilization of mammalian cells.

Solocinski J, Osgood QA, Rosiek E, Underwood L, Zikanov O, Chakraborty N.

PLoS One. 2018 Mar 5;13(3):e0193160. doi: 10.1371/journal.pone.0193160. eCollection 2018.

38.

Forces associated with launch into space do not impact bone fracture healing.

Childress P, Brinker A, Gong CS, Harris J, Olivos DJ 3rd, Rytlewski JD, Scofield DC, Choi SY, Shirazi-Fard Y, McKinley TO, Chu TG, Conley CL, Chakraborty N, Hammamieh R, Kacena MA.

Life Sci Space Res (Amst). 2018 Feb;16:52-62. doi: 10.1016/j.lssr.2017.11.002. Epub 2017 Nov 11.

39.

Gene-metabolite profile integration to understand the cause of spaceflight induced immunodeficiency.

Chakraborty N, Cheema A, Gautam A, Donohue D, Hoke A, Conley C, Jett M, Hammamieh R.

NPJ Microgravity. 2018 Jan 29;4:4. doi: 10.1038/s41526-017-0038-4. eCollection 2018.

40.

Women's television watching and reproductive health behavior in Bangladesh.

Rahman M, Curtis SL, Chakraborty N, Jamil K.

SSM Popul Health. 2017 Jun 15;3:525-533. doi: 10.1016/j.ssmph.2017.06.001. eCollection 2017 Dec.

41.

Transcriptional regulation of chickpea ferritin CaFer1 influences its role in iron homeostasis and stress response.

Parveen S, Pandey A, Jameel N, Chakraborty S, Chakraborty N.

J Plant Physiol. 2018 Mar;222:9-16. doi: 10.1016/j.jplph.2017.12.015. Epub 2017 Dec 27.

PMID:
29304382
42.
43.

Interplay of neuronal and non-neuronal genes regulates intestinal DAF-16-mediated immune response during Fusarium infection of Caenorhabditis elegans.

Nag P, Aggarwal PR, Ghosh S, Narula K, Tayal R, Maheshwari N, Chakraborty N, Chakraborty S.

Cell Death Discov. 2017 Nov 13;3:17073. doi: 10.1038/cddiscovery.2017.73. eCollection 2017.

44.

Quantitative Extracellular Matrix Proteomics Suggests Cell Wall Reprogramming in Host-Specific Immunity During Vascular Wilt Caused by Fusarium oxysporum in Chickpea.

Elagamey E, Narula K, Sinha A, Ghosh S, Abdellatef MAE, Chakraborty N, Chakraborty S.

Proteomics. 2017 Dec;17(23-24). doi: 10.1002/pmic.201600374.

PMID:
29144021
45.

Edawu: a journey from in-patient rehabilitation to community-based treatment and rehabilitation in Nigeria.

Chakraborty N, Erinfolami A, Lucas A.

BJPsych Int. 2017 Aug 1;14(3):66-69. eCollection 2017 Aug.

46.

Nuclear Proteome: Isolation of Intact Nuclei, Extraction of Nuclear Proteins, and 2-DE Analysis.

Pandey A, Chakraborty S, Chakraborty N.

Methods Mol Biol. 2018;1696:41-55. doi: 10.1007/978-1-4939-7411-5_3.

PMID:
29086395
47.

Molecular Dissection of Extracellular Matrix Proteome Reveals Discrete Mechanism Regulating Verticillium Dahliae Triggered Vascular Wilt Disease in Potato.

Elagamey E, Sinha A, Narula K, Abdellatef MAE, Chakraborty N, Chakraborty S.

Proteomics. 2017 Dec;17(23-24). doi: 10.1002/pmic.201600373. Epub 2017 Nov 2.

PMID:
28961394
48.

Enstrophy transport conditional on local flow topologies in different regimes of premixed turbulent combustion.

Papapostolou V, Wacks DH, Chakraborty N, Klein M, Im HG.

Sci Rep. 2017 Sep 14;7(1):11545. doi: 10.1038/s41598-017-11650-x.

49.

Biochemical basis of improvement of defense in tomato plant against Fusarium wilt by CaCl2.

Chakraborty N, Chandra S, Acharya K.

Physiol Mol Biol Plants. 2017 Jul;23(3):581-596. doi: 10.1007/s12298-017-0450-y. Epub 2017 Jun 6.

50.

Modulation of cellular energetics by galactose and pioglitazone.

Grimm D, Altamirano L, Paudel S, Welker L, Konkle ME, Chakraborty N, Menze MA.

Cell Tissue Res. 2017 Sep;369(3):641-646. doi: 10.1007/s00441-017-2657-1. Epub 2017 Aug 3.

PMID:
28776185

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