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Items: 1 to 50 of 416

1.

Altered Levels of Long NcRNAs Meg3 and Neat1 in Cell and Animal models of Huntington's Disease.

Chanda K, Das S, Chakraborty J, Bucha S, Maitra A, Chatterjee R, Mukhopadhyay D, Bhattacharyya NP.

RNA Biol. 2018 Oct 15. doi: 10.1080/15476286.2018.1534524. [Epub ahead of print]

PMID:
30321100
2.

USP14 inhibition corrects an in vivo model of impaired mitophagy.

Chakraborty J, von Stockum S, Marchesan E, Caicci F, Ferrari V, Rakovic A, Klein C, Antonini A, Bubacco L, Ziviani E.

EMBO Mol Med. 2018 Sep 24. pii: e9014. doi: 10.15252/emmm.201809014. [Epub ahead of print]

3.

Regulation of ER-mitochondria contacts by Parkin via Mfn2.

Basso V, Marchesan E, Peggion C, Chakraborty J, von Stockum S, Giacomello M, Ottolini D, Debattisti V, Caicci F, Tasca E, Pegoraro V, Angelini C, Antonini A, Bertoli A, Brini M, Ziviani E.

Pharmacol Res. 2018 Sep 13. pii: S1043-6618(18)30321-9. doi: 10.1016/j.phrs.2018.09.006. [Epub ahead of print]

4.

Synthesis and characterization of chitosan-based waterborne polyurethane for textile finishes.

Naz F, Zuber M, Mehmood Zia K, Salman M, Chakraborty J, Nath I, Verpoort F.

Carbohydr Polym. 2018 Nov 15;200:54-62. doi: 10.1016/j.carbpol.2018.07.076. Epub 2018 Jul 25.

PMID:
30177196
5.

CT radiomics to predict high-risk intraductal papillary mucinous neoplasms of the pancreas.

Chakraborty J, Midya A, Gazit L, Attiyeh M, Langdon-Embry L, Allen PJ, Do RKG, Simpson AL.

Med Phys. 2018 Sep 3. doi: 10.1002/mp.13159. [Epub ahead of print]

PMID:
30176047
6.

Intercalator-Induced DNA Superstructure Formation: Doxorubicin and a Synthetic Quinoxaline Derivative.

Mahata T, Chakraborty J, Kanungo A, Patra D, Basu G, Dutta S.

Biochemistry. 2018 Sep 25;57(38):5557-5563. doi: 10.1021/acs.biochem.8b00613. Epub 2018 Sep 12.

PMID:
30169956
7.

Significance of HER2 and Ki-67 in Preneoplastic Lesions and Carcinoma of Gallbladder.

Halder S, Kundu S, Chakraborty J, Chakrabarti S.

J Gastrointest Cancer. 2018 Aug 29. doi: 10.1007/s12029-018-0162-8. [Epub ahead of print]

PMID:
30155833
8.

Proximity to extremely hazardous substances for people with disabilities: A case study in Houston, Texas.

Chakraborty J.

Disabil Health J. 2018 Aug 9. pii: S1936-6574(18)30147-X. doi: 10.1016/j.dhjo.2018.08.004. [Epub ahead of print]

PMID:
30126829
9.

Preoperative risk prediction for intraductal papillary mucinous neoplasms by quantitative CT image analysis.

Attiyeh MA, Chakraborty J, Gazit L, Langdon-Embry L, Gonen M, Balachandran VP, D'Angelica MI, DeMatteo RP, Jarnagin WR, Kingham TP, Allen PJ, Do RK, Simpson AL.

HPB (Oxford). 2018 Aug 7. pii: S1365-182X(18)32703-5. doi: 10.1016/j.hpb.2018.07.016. [Epub ahead of print]

PMID:
30097414
10.

Autoimmunity in plants.

Chakraborty J, Ghosh P, Das S.

Planta. 2018 Oct;248(4):751-767. doi: 10.1007/s00425-018-2956-0. Epub 2018 Jul 25. Review.

PMID:
30046903
11.

A structured review of baculovirus infection process: integration of mathematical models and biomolecular information on cell-virus interaction.

Saxena A, Byram PK, Singh SK, Chakraborty J, Murhammer D, Giri L.

J Gen Virol. 2018 Sep;99(9):1151-1171. doi: 10.1099/jgv.0.001108. Epub 2018 Jul 19.

PMID:
30027883
12.

Flow-induced deformation in a microchannel with a non-Newtonian fluid.

Raj M K, Chakraborty J, DasGupta S, Chakraborty S.

Biomicrofluidics. 2018 Jun 25;12(3):034116. doi: 10.1063/1.5036632. eCollection 2018 May.

PMID:
30018695
13.

Catalysis of transthiolacylation in the active centers of dihydrolipoamide acyltransacetylase components of 2-oxo acid dehydrogenase complexes.

Chakraborty J, Nemeria NS, Farinas E, Jordan F.

FEBS Open Bio. 2018 Jun 4;8(6):880-896. doi: 10.1002/2211-5463.12431. eCollection 2018 Jun.

14.

Quantitative imaging features of pretreatment CT predict volumetric response to chemotherapy in patients with colorectal liver metastases.

Creasy JM, Midya A, Chakraborty J, Adams LB, Gomes C, Gonen M, Seastedt KP, Sutton EJ, Cercek A, Kemeny NE, Shia J, Balachandran VP, Kingham TP, Allen PJ, DeMatteo RP, Jarnagin WR, D'Angelica MI, Do RKG, Simpson AL.

Eur Radiol. 2018 Jun 19. doi: 10.1007/s00330-018-5542-8. [Epub ahead of print]

PMID:
29922934
15.

Short-term reproducibility of radiomic features in liver parenchyma and liver malignancies on contrast-enhanced CT imaging.

Perrin T, Midya A, Yamashita R, Chakraborty J, Saidon T, Jarnagin WR, Gonen M, Simpson AL, Do RKG.

Abdom Radiol (NY). 2018 May 5. doi: 10.1007/s00261-018-1600-6. [Epub ahead of print]

PMID:
29730738
16.

Functional diversification of structurally alike NLR proteins in plants.

Chakraborty J, Jain A, Mukherjee D, Ghosh S, Das S.

Plant Sci. 2018 Apr;269:85-93. doi: 10.1016/j.plantsci.2018.01.008. Epub 2018 Jan 31. Review.

PMID:
29606220
17.

Environmental injustice and flood risk: A conceptual model and case comparison of metropolitan Miami and Houston, USA.

Collins TW, Grineski SE, Chakraborty J.

Reg Environ Change. 2018 Feb;18(2):311-323. doi: 10.1007/s10113-017-1121-9. Epub 2017 Feb 13.

PMID:
29551952
18.

Adherence to quality indicators and surveillance guidelines in the management of Barrett's esophagus: a retrospective analysis.

Westerveld D, Khullar V, Mramba L, Ayoub F, Brar T, Agarwal M, Forde J, Chakraborty J, Riverso M, Perbtani YB, Gupte A, Forsmark CE, Draganov P, Yang D.

Endosc Int Open. 2018 Mar;6(3):E300-E307. doi: 10.1055/s-0044-101351. Epub 2018 Mar 1.

19.

Influence of CT acquisition and reconstruction parameters on radiomic feature reproducibility.

Midya A, Chakraborty J, Gönen M, Do RKG, Simpson AL.

J Med Imaging (Bellingham). 2018 Jan;5(1):011020. doi: 10.1117/1.JMI.5.1.011020. Epub 2018 Feb 15.

PMID:
29487877
20.

Quantitative Imaging Features and Postoperative Hepatic Insufficiency: A Multi-Institutional Expanded Cohort.

Pak LM, Chakraborty J, Gonen M, Chapman WC, Do RKG, Groot Koerkamp B, Verhoef K, Lee SY, Massani M, van der Stok EP, Simpson AL; Memorial Sloan Kettering Cancer Center Hepatopancreatobiliary Service.

J Am Coll Surg. 2018 May;226(5):835-843. doi: 10.1016/j.jamcollsurg.2018.02.001. Epub 2018 Feb 15.

PMID:
29454098
21.

Characterization of a topologically unique oxygenase from Sphingobium sp. PNB capable of catalyzing a broad spectrum of aromatics.

Khara P, Roy M, Chakraborty J, Dutta A, Dutta TK.

Enzyme Microb Technol. 2018 Apr;111:74-80. doi: 10.1016/j.enzmictec.2017.10.006. Epub 2017 Oct 18.

PMID:
29421041
22.

Survival Prediction in Pancreatic Ductal Adenocarcinoma by Quantitative Computed Tomography Image Analysis.

Attiyeh MA, Chakraborty J, Doussot A, Langdon-Embry L, Mainarich S, Gönen M, Balachandran VP, D'Angelica MI, DeMatteo RP, Jarnagin WR, Kingham TP, Allen PJ, Simpson AL, Do RK.

Ann Surg Oncol. 2018 Apr;25(4):1034-1042. doi: 10.1245/s10434-017-6323-3. Epub 2018 Jan 29.

PMID:
29380093
23.

One pot synthesis of carbon dots decorated carboxymethyl cellulose- hydroxyapatite nanocomposite for drug delivery, tissue engineering and Fe3+ ion sensing.

Sarkar C, Chowdhuri AR, Kumar A, Laha D, Garai S, Chakraborty J, Sahu SK.

Carbohydr Polym. 2018 Feb 1;181:710-718. doi: 10.1016/j.carbpol.2017.11.091. Epub 2017 Nov 27.

PMID:
29254027
24.

Preliminary study of tumor heterogeneity in imaging predicts two year survival in pancreatic cancer patients.

Chakraborty J, Langdon-Embry L, Cunanan KM, Escalon JG, Allen PJ, Lowery MA, O'Reilly EM, Gönen M, Do RG, Simpson AL.

PLoS One. 2017 Dec 7;12(12):e0188022. doi: 10.1371/journal.pone.0188022. eCollection 2017.

25.

Racial disparity in breast cancer: can it be mattered for prognosis and therapy.

Gupta V, Haque I, Chakraborty J, Graff S, Banerjee S, Banerjee SK.

J Cell Commun Signal. 2018 Mar;12(1):119-132. doi: 10.1007/s12079-017-0416-4. Epub 2017 Nov 29. Review.

26.
27.

Preoperative Prediction of Microvascular Invasion in Hepatocellular Carcinoma Using Quantitative Image Analysis.

Zheng J, Chakraborty J, Chapman WC, Gerst S, Gonen M, Pak LM, Jarnagin WR, DeMatteo RP, Do RKG, Simpson AL; Hepatopancreatobiliary Service in the Department of Surgery of the Memorial Sloan Kettering Cancer Center; Research Staff in the Department of Surgery at Washington University School of Medicine.

J Am Coll Surg. 2017 Dec;225(6):778-788.e1. doi: 10.1016/j.jamcollsurg.2017.09.003. Epub 2017 Sep 21.

PMID:
28941728
28.

Pitfalls in the cytological diagnosis of tenosynovial giant cell tumor: An illustration of eight discordant cases.

Mondal K, Mandal R, Khan K, Chakraborty J.

Diagn Cytopathol. 2018 Mar;46(3):250-257. doi: 10.1002/dc.23825. Epub 2017 Sep 23.

PMID:
28941190
29.

Carbon dioxide insufflation is associated with increased serrated polyp detection rate when compared to room air insufflation during screening colonoscopy.

Riverso M, Perbtani YB, Shuster JJD, Chakraborty J, Brar TS, Agarwal M, Zhang H, Gupte A, Chauhan SS, Forsmark CE, Draganov PV, Yang D.

Endosc Int Open. 2017 Sep;5(9):E905-E912. doi: 10.1055/s-0043-116382. Epub 2017 Sep 13.

30.

Synergistic degradation of pyrene by five culturable bacteria in a mangrove sediment-derived bacterial consortium.

Wanapaisan P, Laothamteep N, Vejarano F, Chakraborty J, Shintani M, Muangchinda C, Morita T, Suzuki-Minakuchi C, Inoue K, Nojiri H, Pinyakong O.

J Hazard Mater. 2018 Jan 15;342:561-570. doi: 10.1016/j.jhazmat.2017.08.062. Epub 2017 Sep 19.

PMID:
28886568
31.
32.

Associations of ERAP1 coding variants and domain specific interaction with HLA-C∗06 in the early onset psoriasis patients of India.

Das A, Chandra A, Chakraborty J, Chattopadhyay A, Senapati S, Chatterjee G, Chatterjee R.

Hum Immunol. 2017 Nov;78(11-12):724-730. doi: 10.1016/j.humimm.2017.08.006. Epub 2017 Sep 1.

PMID:
28867178
33.

Survey study on the practice patterns in the endoscopic management of malignant distal biliary obstruction.

Yang D, Perbtani YB, An Q, Agarwal M, Riverso M, Chakraborty J, Brar TS, Westerveld D, Zhang H, Chauhan SS, Forsmark CE, Draganov PV.

Endosc Int Open. 2017 Aug;5(8):E754-E762. doi: 10.1055/s-0043-111592. Epub 2017 Aug 7.

34.

Electronic and magnetic properties of low-dimensional system Co2TeO3Cl2.

Chakraborty J.

J Phys Condens Matter. 2017 Oct 4;29(39):395801. doi: 10.1088/1361-648X/aa7ec4. Epub 2017 Jul 10.

PMID:
28692428
35.

WITHDRAWN: Curcumin shifts RAS-induced pro-proliferative MEK/ERK-signaling toward pro-apoptotic p38MAPK/JNK1-signaling, triggering p53 activation and apoptosis.

Banerjee S, Bhattacharjee P, Chakraborty J, Panda AK, Bandyopadhyay A, Banik SK, Sa G.

J Biol Chem. 2017 Jul 6. pii: jbc.M117.784868. doi: 10.1074/jbc.M117.784868. [Epub ahead of print]

36.

Neighborhood Structural Similarity Mapping for the Classification of Masses in Mammograms.

Rabidas R, Midya A, Chakraborty J.

IEEE J Biomed Health Inform. 2018 May;22(3):826-834. doi: 10.1109/JBHI.2017.2715021. Epub 2017 Jun 13.

PMID:
28622679
37.

siRNA-nanoparticle conjugate in gene silencing: A future cure to deadly diseases?

Acharya R, Saha S, Ray S, Hazra S, Mitra MK, Chakraborty J.

Mater Sci Eng C Mater Biol Appl. 2017 Jul 1;76:1378-1400. doi: 10.1016/j.msec.2017.03.009. Epub 2017 Mar 2. Review.

PMID:
28482505
38.

Channel-Assisted Proton Conduction Behavior in Hydroxyl-Rich Lanthanide-Based Magnetic Metal-Organic Frameworks.

Biswas S, Chakraborty J, Singh Parmar V, Bera SP, Ganguli N, Konar S.

Inorg Chem. 2017 May 1;56(9):4956-4965. doi: 10.1021/acs.inorgchem.6b03147. Epub 2017 Apr 20.

PMID:
28426209
39.

Human papilloma virus (HPV) infection leads to the development of head and neck lesions but offers better prognosis in malignant Indian patients.

Sarkar S, Alam N, Chakraborty J, Biswas J, Mandal SS, Roychoudhury S, Panda CK.

Med Microbiol Immunol. 2017 Jun;206(3):267-276. doi: 10.1007/s00430-017-0502-5. Epub 2017 Mar 25.

PMID:
28343330
40.

Post translational modification of Parkin.

Chakraborty J, Basso V, Ziviani E.

Biol Direct. 2017 Feb 21;12(1):6. doi: 10.1186/s13062-017-0176-3. Review.

41.

Genome-wide DNA methylation profile identified a unique set of differentially methylated immune genes in oral squamous cell carcinoma patients in India.

Basu B, Chakraborty J, Chandra A, Katarkar A, Baldevbhai JRK, Dhar Chowdhury D, Ray JG, Chaudhuri K, Chatterjee R.

Clin Epigenetics. 2017 Feb 3;9:13. doi: 10.1186/s13148-017-0314-x. eCollection 2017.

42.

Racial Differences in Perceptions of Air Pollution Health Risk: Does Environmental Exposure Matter?

Chakraborty J, Collins TW, Grineski SE, Maldonado A.

Int J Environ Res Public Health. 2017 Jan 25;14(2). pii: E116. doi: 10.3390/ijerph14020116.

43.
44.

Thermophilic bacteria are potential sources of novel Rieske non-heme iron oxygenases.

Chakraborty J, Suzuki-Minakuchi C, Okada K, Nojiri H.

AMB Express. 2017 Dec;7(1):17. doi: 10.1186/s13568-016-0318-5. Epub 2017 Jan 4.

45.

Does carbon dioxide insufflation impact adenoma detection rate? A single-center retrospective analysis.

Perbtani YB, Riverso M, Shuster JJ, Chakraborty J, Brar TS, Agarwal M, Zhang H, Gupte A, Chauhan SS, Forsmark CE, Draganov PV, Yang D.

Endosc Int Open. 2016 Dec;4(12):E1275-E1279. Epub 2016 Nov 24.

46.

Environmental Justice Research: Contemporary Issues and Emerging Topics.

Chakraborty J, Collins TW, Grineski SE.

Int J Environ Res Public Health. 2016 Nov 1;13(11). pii: E1072.

47.

Hazard Characteristics and Patterns of Environmental Injustice: Household-Level Determinants of Environmental Risk in Miami, Florida.

Grineski SE, Collins TW, Chakraborty J, Montgomery M.

Risk Anal. 2017 Jul;37(7):1419-1434. doi: 10.1111/risa.12706. Epub 2016 Oct 19.

PMID:
27760278
48.

Crocetin exploits p53-induced death domain (PIDD) and FAS-associated death domain (FADD) proteins to induce apoptosis in colorectal cancer.

Ray P, Guha D, Chakraborty J, Banerjee S, Adhikary A, Chakraborty S, Das T, Sa G.

Sci Rep. 2016 Sep 13;6:32979. doi: 10.1038/srep32979.

49.

Exposure to Flood Hazards in Miami and Houston: Are Hispanic Immigrants at Greater Risk than Other Social Groups?

Maldonado A, Collins TW, Grineski SE, Chakraborty J.

Int J Environ Res Public Health. 2016 Aug 1;13(8). pii: E775. doi: 10.3390/ijerph13080775.

50.

First principles study of the electronic structure and magnetic properties of spin chain compounds: Ca3ZnMnO6 and Ca3ZnCoO6.

Chakraborty J, Samanta S, Nanda BR, Dasgupta I.

J Phys Condens Matter. 2016 Sep 21;28(37):375501. doi: 10.1088/0953-8984/28/37/375501. Epub 2016 Jul 15.

PMID:
27419390

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