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Best matches for Cerdeño-Tárraga AM[au]:

Annotation of plasmid genes. Thomas CM et al. Plasmid. (2017)

Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2). Bentley SD et al. Nature. (2002)

The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome. Sebaihia M et al. Nat Genet. (2006)

Search results

Items: 25

1.

Annotation of plasmid genes.

Thomas CM, Thomson NR, Cerdeño-Tárraga AM, Brown CJ, Top EM, Frost LS.

Plasmid. 2017 May;91:61-67. doi: 10.1016/j.plasmid.2017.03.006. Epub 2017 Mar 30. Review.

2.

Value, but high costs in post-deposition data curation.

ten Hoopen P, Amid C, Buttigieg PL, Pafilis E, Bravakos P, Cerdeño-Tárraga AM, Gibson R, Kahlke T, Legaki A, Narayana Murthy K, Papastefanou G, Pereira E, Rossello M, Luisa Toribio A, Cochrane G.

Database (Oxford). 2016 Feb 9;2016. pii: bav126. doi: 10.1093/database/bav126. Print 2016.

3.

Complete Genome Sequences of Two Citrobacter rodentium Bacteriophages, CR8 and CR44b.

Toribio AL, Pickard D, Cerdeño-Tárraga AM, Petty NK, Thomson N, Salmond G, Dougan G.

Genome Announc. 2014 May 29;2(3). pii: e00146-14. doi: 10.1128/genomeA.00146-14.

4.

A small predatory core genome in the divergent marine Bacteriovorax marinus SJ and the terrestrial Bdellovibrio bacteriovorus.

Crossman LC, Chen H, Cerdeño-Tárraga AM, Brooks K, Quail MA, Pineiro SA, Hobley L, Sockett RE, Bentley SD, Parkhill J, Williams HN, Stine OC.

ISME J. 2013 Jan;7(1):148-60. doi: 10.1038/ismej.2012.90. Epub 2012 Sep 6.

5.

Complete sequence and molecular epidemiology of IncK epidemic plasmid encoding blaCTX-M-14.

Cottell JL, Webber MA, Coldham NG, Taylor DL, Cerdeño-Tárraga AM, Hauser H, Thomson NR, Woodward MJ, Piddock LJ.

Emerg Infect Dis. 2011 Apr;17(4):645-52. doi: 10.3201/eid1704.101009. Erratum in: Emerg Infect Dis. 2011 Jul;17(7):1341.

6.

Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis.

Patrick S, Blakely GW, Houston S, Moore J, Abratt VR, Bertalan M, Cerdeño-Tárraga AM, Quail MA, Corton N, Corton C, Bignell A, Barron A, Clark L, Bentley SD, Parkhill J.

Microbiology. 2010 Nov;156(Pt 11):3255-69. doi: 10.1099/mic.0.042978-0. Epub 2010 Sep 9.

7.

The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli.

Petty NK, Bulgin R, Crepin VF, Cerdeño-Tárraga AM, Schroeder GN, Quail MA, Lennard N, Corton C, Barron A, Clark L, Toribio AL, Parkhill J, Dougan G, Frankel G, Thomson NR.

J Bacteriol. 2010 Jan;192(2):525-38. doi: 10.1128/JB.01144-09. Epub 2009 Nov 6.

8.

Genome watch: What a scorcher!

Cerdeño-Tárraga AM.

Nat Rev Microbiol. 2009 Jun;7(6):408-9. doi: 10.1038/nrmicro2154.

PMID:
19444245
9.

Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens.

Silby MW, Cerdeño-Tárraga AM, Vernikos GS, Giddens SR, Jackson RW, Preston GM, Zhang XX, Moon CD, Gehrig SM, Godfrey SA, Knight CG, Malone JG, Robinson Z, Spiers AJ, Harris S, Challis GL, Yaxley AM, Harris D, Seeger K, Murphy L, Rutter S, Squares R, Quail MA, Saunders E, Mavromatis K, Brettin TS, Bentley SD, Hothersall J, Stephens E, Thomas CM, Parkhill J, Levy SB, Rainey PB, Thomson NR.

Genome Biol. 2009;10(5):R51. doi: 10.1186/gb-2009-10-5-r51. Epub 2009 May 11.

10.

In silico identification of genes in bacteriophage DNA.

Kropinski AM, Borodovsky M, Carver TJ, Cerdeño-Tárraga AM, Darling A, Lomsadze A, Mahadevan P, Stothard P, Seto D, Van Domselaar G, Wishart DS.

Methods Mol Biol. 2009;502:57-89. doi: 10.1007/978-1-60327-565-1_6.

PMID:
19082552
11.

The genome of Burkholderia cenocepacia J2315, an epidemic pathogen of cystic fibrosis patients.

Holden MT, Seth-Smith HM, Crossman LC, Sebaihia M, Bentley SD, Cerdeño-Tárraga AM, Thomson NR, Bason N, Quail MA, Sharp S, Cherevach I, Churcher C, Goodhead I, Hauser H, Holroyd N, Mungall K, Scott P, Walker D, White B, Rose H, Iversen P, Mil-Homens D, Rocha EP, Fialho AM, Baldwin A, Dowson C, Barrell BG, Govan JR, Vandamme P, Hart CA, Mahenthiralingam E, Parkhill J.

J Bacteriol. 2009 Jan;191(1):261-77. doi: 10.1128/JB.01230-08. Epub 2008 Oct 17. Erratum in: J Bacteriol. 2009 Apr;191(8):2907.

12.

Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes.

Sebaihia M, Peck MW, Minton NP, Thomson NR, Holden MT, Mitchell WJ, Carter AT, Bentley SD, Mason DR, Crossman L, Paul CJ, Ivens A, Wells-Bennik MH, Davis IJ, Cerdeño-Tárraga AM, Churcher C, Quail MA, Chillingworth T, Feltwell T, Fraser A, Goodhead I, Hance Z, Jagels K, Larke N, Maddison M, Moule S, Mungall K, Norbertczak H, Rabbinowitsch E, Sanders M, Simmonds M, White B, Whithead S, Parkhill J.

Genome Res. 2007 Jul;17(7):1082-92. Epub 2007 May 22.

13.

Animal, vegetable or mineral?

Cerdeño-Tárraga AM, Bentley S.

Nat Rev Microbiol. 2006 Oct;4(10):725-6. No abstract available.

PMID:
16983803
14.

The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome.

Sebaihia M, Wren BW, Mullany P, Fairweather NF, Minton N, Stabler R, Thomson NR, Roberts AP, Cerdeño-Tárraga AM, Wang H, Holden MT, Wright A, Churcher C, Quail MA, Baker S, Bason N, Brooks K, Chillingworth T, Cronin A, Davis P, Dowd L, Fraser A, Feltwell T, Hance Z, Holroyd S, Jagels K, Moule S, Mungall K, Price C, Rabbinowitsch E, Sharp S, Simmonds M, Stevens K, Unwin L, Whithead S, Dupuy B, Dougan G, Barrell B, Parkhill J.

Nat Genet. 2006 Jul;38(7):779-86. Epub 2006 Jun 25.

PMID:
16804543
15.

Multireplicon genome architecture of Lactobacillus salivarius.

Claesson MJ, Li Y, Leahy S, Canchaya C, van Pijkeren JP, Cerdeño-Tárraga AM, Parkhill J, Flynn S, O'Sullivan GC, Collins JK, Higgins D, Shanahan F, Fitzgerald GF, van Sinderen D, O'Toole PW.

Proc Natl Acad Sci U S A. 2006 Apr 25;103(17):6718-23. Epub 2006 Apr 14.

16.

The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation.

Thomson NR, Yeats C, Bell K, Holden MT, Bentley SD, Livingstone M, Cerdeño-Tárraga AM, Harris B, Doggett J, Ormond D, Mungall K, Clarke K, Feltwell T, Hance Z, Sanders M, Quail MA, Price C, Barrell BG, Parkhill J, Longbottom D.

Genome Res. 2005 May;15(5):629-40. Epub 2005 Apr 18.

17.

Extensive DNA inversions in the B. fragilis genome control variable gene expression.

Cerdeño-Tárraga AM, Patrick S, Crossman LC, Blakely G, Abratt V, Lennard N, Poxton I, Duerden B, Harris B, Quail MA, Barron A, Clark L, Corton C, Doggett J, Holden MT, Larke N, Line A, Lord A, Norbertczak H, Ormond D, Price C, Rabbinowitsch E, Woodward J, Barrell B, Parkhill J.

Science. 2005 Mar 4;307(5714):1463-5.

18.

Transferable antibiotic resistance elements in Haemophilus influenzae share a common evolutionary origin with a diverse family of syntenic genomic islands.

Mohd-Zain Z, Turner SL, Cerdeño-Tárraga AM, Lilley AK, Inzana TJ, Duncan AJ, Harding RM, Hood DW, Peto TE, Crook DW.

J Bacteriol. 2004 Dec;186(23):8114-22.

19.

Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei.

Holden MT, Titball RW, Peacock SJ, Cerdeño-Tárraga AM, Atkins T, Crossman LC, Pitt T, Churcher C, Mungall K, Bentley SD, Sebaihia M, Thomson NR, Bason N, Beacham IR, Brooks K, Brown KA, Brown NF, Challis GL, Cherevach I, Chillingworth T, Cronin A, Crossett B, Davis P, DeShazer D, Feltwell T, Fraser A, Hance Z, Hauser H, Holroyd S, Jagels K, Keith KE, Maddison M, Moule S, Price C, Quail MA, Rabbinowitsch E, Rutherford K, Sanders M, Simmonds M, Songsivilai S, Stevens K, Tumapa S, Vesaratchavest M, Whitehead S, Yeats C, Barrell BG, Oyston PC, Parkhill J.

Proc Natl Acad Sci U S A. 2004 Sep 28;101(39):14240-5. Epub 2004 Sep 17.

20.

Comparative cell wall core biosynthesis in the mycolated pathogens, Mycobacterium tuberculosis and Corynebacterium diphtheriae.

Dover LG, Cerdeño-Tárraga AM, Pallen MJ, Parkhill J, Besra GS.

FEMS Microbiol Rev. 2004 May;28(2):225-50. Review.

21.

Shrinking genomics.

Thomson NR, Sebaihia M, Cerdeño-Tárraga AM, Holden MT, Parkhill J.

Nat Rev Microbiol. 2004 Jan;2(1):11.

PMID:
15035003
22.

The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129.

Cerdeño-Tárraga AM, Efstratiou A, Dover LG, Holden MT, Pallen M, Bentley SD, Besra GS, Churcher C, James KD, De Zoysa A, Chillingworth T, Cronin A, Dowd L, Feltwell T, Hamlin N, Holroyd S, Jagels K, Moule S, Quail MA, Rabbinowitsch E, Rutherford KM, Thomson NR, Unwin L, Whitehead S, Barrell BG, Parkhill J.

Nucleic Acids Res. 2003 Nov 15;31(22):6516-23.

23.

Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.

Parkhill J, Sebaihia M, Preston A, Murphy LD, Thomson N, Harris DE, Holden MT, Churcher CM, Bentley SD, Mungall KL, Cerdeño-Tárraga AM, Temple L, James K, Harris B, Quail MA, Achtman M, Atkin R, Baker S, Basham D, Bason N, Cherevach I, Chillingworth T, Collins M, Cronin A, Davis P, Doggett J, Feltwell T, Goble A, Hamlin N, Hauser H, Holroyd S, Jagels K, Leather S, Moule S, Norberczak H, O'Neil S, Ormond D, Price C, Rabbinowitsch E, Rutter S, Sanders M, Saunders D, Seeger K, Sharp S, Simmonds M, Skelton J, Squares R, Squares S, Stevens K, Unwin L, Whitehead S, Barrell BG, Maskell DJ.

Nat Genet. 2003 Sep;35(1):32-40. Epub 2003 Aug 10.

PMID:
12910271
24.

Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).

Bentley SD, Chater KF, Cerdeño-Tárraga AM, Challis GL, Thomson NR, James KD, Harris DE, Quail MA, Kieser H, Harper D, Bateman A, Brown S, Chandra G, Chen CW, Collins M, Cronin A, Fraser A, Goble A, Hidalgo J, Hornsby T, Howarth S, Huang CH, Kieser T, Larke L, Murphy L, Oliver K, O'Neil S, Rabbinowitsch E, Rajandream MA, Rutherford K, Rutter S, Seeger K, Saunders D, Sharp S, Squares R, Squares S, Taylor K, Warren T, Wietzorrek A, Woodward J, Barrell BG, Parkhill J, Hopwood DA.

Nature. 2002 May 9;417(6885):141-7.

PMID:
12000953
25.

Genome sequence of Yersinia pestis, the causative agent of plague.

Parkhill J, Wren BW, Thomson NR, Titball RW, Holden MT, Prentice MB, Sebaihia M, James KD, Churcher C, Mungall KL, Baker S, Basham D, Bentley SD, Brooks K, Cerdeño-Tárraga AM, Chillingworth T, Cronin A, Davies RM, Davis P, Dougan G, Feltwell T, Hamlin N, Holroyd S, Jagels K, Karlyshev AV, Leather S, Moule S, Oyston PC, Quail M, Rutherford K, Simmonds M, Skelton J, Stevens K, Whitehead S, Barrell BG.

Nature. 2001 Oct 4;413(6855):523-7.

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