Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 123

1.

Nod2 Deficiency in mice is Associated with Microbiota Variation Favouring the Expansion of mucosal CD4+ LAP+ Regulatory Cells.

Butera A, Di Paola M, Pavarini L, Strati F, Pindo M, Sanchez M, Cavalieri D, Boirivant M, De Filippo C.

Sci Rep. 2018 Sep 24;8(1):14241. doi: 10.1038/s41598-018-32583-z.

2.

Population genomics reveals evolution and variation of Saccharomyces cerevisiae in the human and insects gut.

Ramazzotti M, Stefanini I, Di Paola M, De Filippo C, Rizzetto L, Berná L, Dapporto L, Rivero D, Tocci N, Weil T, Lenucci MS, Lionetti P, Cavalieri D.

Environ Microbiol. 2019 Jan;21(1):50-71. doi: 10.1111/1462-2920.14422. Epub 2018 Nov 21.

PMID:
30246283
3.

Metagenomic Approaches to Investigate the Contribution of the Vineyard Environment to the Quality of Wine Fermentation: Potentials and Difficulties.

Stefanini I, Cavalieri D.

Front Microbiol. 2018 May 16;9:991. doi: 10.3389/fmicb.2018.00991. eCollection 2018. Review.

4.

ONS: an ontology for a standardized description of interventions and observational studies in nutrition.

Vitali F, Lombardo R, Rivero D, Mattivi F, Franceschi P, Bordoni A, Trimigno A, Capozzi F, Felici G, Taglino F, Miglietta F, De Cock N, Lachat C, De Baets B, De Tré G, Pinart M, Nimptsch K, Pischon T, Bouwman J, Cavalieri D; ENPADASI consortium.

Genes Nutr. 2018 Apr 30;13:12. doi: 10.1186/s12263-018-0601-y. eCollection 2018.

5.

Intestinal Candida parapsilosis isolates from Rett syndrome subjects bear potential virulent traits and capacity to persist within the host.

Strati F, Calabrò A, Donati C, De Felice C, Hayek J, Jousson O, Leoncini S, Renzi D, Rizzetto L, De Filippo C, Cavalieri D.

BMC Gastroenterol. 2018 May 2;18(1):57. doi: 10.1186/s12876-018-0785-z.

6.

Deciphering the mechanism of action of 089, a compound impairing the fungal cell cycle.

Stefanini I, Rizzetto L, Rivero D, Carbonell S, Gut M, Heath S, Gut IG, Trabocchi A, Guarna A, Ben Ghazzi N, Bowyer P, Kapushesky M, Cavalieri D.

Sci Rep. 2018 Apr 13;8(1):5964. doi: 10.1038/s41598-018-24341-y.

7.

Genomic and Phenotypic Variation in Morphogenetic Networks of Two Candida albicans Isolates Subtends Their Different Pathogenic Potential.

Cavalieri D, Di Paola M, Rizzetto L, Tocci N, De Filippo C, Lionetti P, Ardizzoni A, Colombari B, Paulone S, Gut IG, Berná L, Gut M, Blanc J, Kapushesky M, Pericolini E, Blasi E, Peppoloni S.

Front Immunol. 2018 Jan 19;8:1997. doi: 10.3389/fimmu.2017.01997. eCollection 2017.

8.

Guidelines and recommendations on yeast cell death nomenclature.

Carmona-Gutierrez D, Bauer MA, Zimmermann A, Aguilera A, Austriaco N, Ayscough K, Balzan R, Bar-Nun S, Barrientos A, Belenky P, Blondel M, Braun RJ, Breitenbach M, Burhans WC, Büttner S, Cavalieri D, Chang M, Cooper KF, Côrte-Real M, Costa V, Cullin C, Dawes I, Dengjel J, Dickman MB, Eisenberg T, Fahrenkrog B, Fasel N, Fröhlich KU, Gargouri A, Giannattasio S, Goffrini P, Gourlay CW, Grant CM, Greenwood MT, Guaragnella N, Heger T, Heinisch J, Herker E, Herrmann JM, Hofer S, Jiménez-Ruiz A, Jungwirth H, Kainz K, Kontoyiannis DP, Ludovico P, Manon S, Martegani E, Mazzoni C, Megeney LA, Meisinger C, Nielsen J, Nyström T, Osiewacz HD, Outeiro TF, Park HO, Pendl T, Petranovic D, Picot S, Polčic P, Powers T, Ramsdale M, Rinnerthaler M, Rockenfeller P, Ruckenstuhl C, Schaffrath R, Segovia M, Severin FF, Sharon A, Sigrist SJ, Sommer-Ruck C, Sousa MJ, Thevelein JM, Thevissen K, Titorenko V, Toledano MB, Tuite M, Vögtle FN, Westermann B, Winderickx J, Wissing S, Wölfl S, Zhang ZJ, Zhao RY, Zhou B, Galluzzi L, Kroemer G, Madeo F.

Microb Cell. 2018 Jan 1;5(1):4-31. doi: 10.15698/mic2018.01.607. Review.

9.

Microbiota and environmental stress: how pollution affects microbial communities in Manila clams.

Milan M, Carraro L, Fariselli P, Martino ME, Cavalieri D, Vitali F, Boffo L, Patarnello T, Bargelloni L, Cardazzo B.

Aquat Toxicol. 2018 Jan;194:195-207. doi: 10.1016/j.aquatox.2017.11.019. Epub 2017 Nov 27.

PMID:
29202271
10.

SaccharomycesIDentifier, SID: strain-level analysis of Saccharomyces cerevisiae populations by using microsatellite meta-patterns.

Stefanini I, Albanese D, Sordo M, Legras JL, De Filippo C, Cavalieri D, Donati C.

Sci Rep. 2017 Nov 10;7(1):15343. doi: 10.1038/s41598-017-15729-3.

11.

Bifidobacterium callitrichidarum sp. nov. from the faeces of the emperor tamarin (Saguinus imperator).

Modesto M, Michelini S, Sansosti MC, De Filippo C, Cavalieri D, Qvirist L, Andlid T, Spiezio C, Sandri C, Pascarelli S, Sgorbati B, Mattarelli P.

Int J Syst Evol Microbiol. 2018 Jan;68(1):141-148. doi: 10.1099/ijsem.0.002472. Epub 2017 Nov 8.

PMID:
29116036
12.

Diet, Environments, and Gut Microbiota. A Preliminary Investigation in Children Living in Rural and Urban Burkina Faso and Italy.

De Filippo C, Di Paola M, Ramazzotti M, Albanese D, Pieraccini G, Banci E, Miglietta F, Cavalieri D, Lionetti P.

Front Microbiol. 2017 Oct 13;8:1979. doi: 10.3389/fmicb.2017.01979. eCollection 2017.

13.

Survival of metastatic melanoma patients after dendritic cell vaccination correlates with expression of leukocyte phosphatidylethanolamine-binding protein 1/Raf kinase inhibitory protein.

Buschow SI, Ramazzotti M, Reinieren-Beeren IMJ, Heinzerling LM, Westdorp H, Stefanini I, Beltrame L, Hato SV, Ellebaek E, Gross S, Nguyen VA, Weinlich G, Ragoussis J, Baban D, Schuler-Thurner B, Svane IM, Romani N, Austyn JM, De Vries IJM, Schuler G, Cavalieri D, Figdor CG.

Oncotarget. 2017 Jun 27;8(40):67439-67456. doi: 10.18632/oncotarget.18698. eCollection 2017 Sep 15.

14.

Non-invasive real time monitoring of yeast volatilome by PTR-ToF-MS.

Khomenko I, Stefanini I, Cappellin L, Cappelletti V, Franceschi P, Cavalieri D, Märk TD, Biasioli F.

Metabolomics. 2017;13(10):118. doi: 10.1007/s11306-017-1259-y. Epub 2017 Aug 31.

15.

Characterization of cervico-vaginal microbiota in women developing persistent high-risk Human Papillomavirus infection.

Di Paola M, Sani C, Clemente AM, Iossa A, Perissi E, Castronovo G, Tanturli M, Rivero D, Cozzolino F, Cavalieri D, Carozzi F, De Filippo C, Torcia MG.

Sci Rep. 2017 Aug 31;7(1):10200. doi: 10.1038/s41598-017-09842-6.

16.

Adaptive Mistranslation Accelerates the Evolution of Fluconazole Resistance and Induces Major Genomic and Gene Expression Alterations in Candida albicans.

Weil T, Santamaría R, Lee W, Rung J, Tocci N, Abbey D, Bezerra AR, Carreto L, Moura GR, Bayés M, Gut IG, Csikasz-Nagy A, Cavalieri D, Berman J, Santos MAS.

mSphere. 2017 Aug 9;2(4). pii: e00167-17. doi: 10.1128/mSphere.00167-17. eCollection 2017 Jul-Aug.

17.

Antithrombotic therapy and platelet transfusions in hematologic malignancy patients presenting chemotherapy-induced thrombocytopenia: a French survey.

Chalayer E, Cavalieri D, Martignoles JA, Genthon A, Tavernier E, Tardy B.

Transfusion. 2017 Jul;57(7):1717-1723. doi: 10.1111/trf.14120. Epub 2017 Apr 25.

PMID:
28439927
18.

Relations between Effects and Structure of Small Bicyclic Molecules on the Complex Model System Saccharomyces cerevisiae.

Brilli M, Trabocchi A, Weil T, Cavalieri D, Stefanini I.

Front Pharmacol. 2017 Mar 30;8:170. doi: 10.3389/fphar.2017.00170. eCollection 2017.

19.

Core Microbiota and Metabolome of Vitis vinifera L. cv. Corvina Grapes and Musts.

Stefanini I, Carlin S, Tocci N, Albanese D, Donati C, Franceschi P, Paris M, Zenato A, Tempesta S, Bronzato A, Vrhovsek U, Mattivi F, Cavalieri D.

Front Microbiol. 2017 Mar 21;8:457. doi: 10.3389/fmicb.2017.00457. eCollection 2017.

20.

[Erratum to: "Immunotherapy and allogeneic stem cells transplantation" [Bull. Cancer 103 (2016) S164-174]].

Fontbrune FS, Cavalieri D, Leclerc M, Beckerich F, Maury S, Latour RP, N-Guyen S, Bay JO.

Bull Cancer. 2017 May;104(5):494. doi: 10.1016/j.bulcan.2017.02.006. Epub 2017 Apr 1. French. No abstract available.

PMID:
28372793
21.

Legal immigrants: invasion of alien microbial communities during winter occurring desert dust storms.

Weil T, De Filippo C, Albanese D, Donati C, Pindo M, Pavarini L, Carotenuto F, Pasqui M, Poto L, Gabrieli J, Barbante C, Sattler B, Cavalieri D, Miglietta F.

Microbiome. 2017 Mar 10;5(1):32. doi: 10.1186/s40168-017-0249-7.

22.

New evidences on the altered gut microbiota in autism spectrum disorders.

Strati F, Cavalieri D, Albanese D, De Felice C, Donati C, Hayek J, Jousson O, Leoncini S, Renzi D, Calabrò A, De Filippo C.

Microbiome. 2017 Feb 22;5(1):24. doi: 10.1186/s40168-017-0242-1.

23.

Pathway Inspector: a pathway based web application for RNAseq analysis of model and non-model organisms.

Bianco L, Riccadonna S, Lavezzo E, Falda M, Formentin E, Cavalieri D, Toppo S, Fontana P.

Bioinformatics. 2017 Feb 1;33(3):453-455. doi: 10.1093/bioinformatics/btw636.

24.

Immunothérapie et greffe de cellules souches hématopoïétiques allogéniques.

de Fontbrune FS, Cavalieri D, Leclerc M, Beckerich F, Maury S, de Latour RP, N-Guyen S, Bay JO.

Bull Cancer. 2016 Nov;103 Suppl 1:S164-S174. doi: 10.1016/S0007-4551(16)30375-7. French. Erratum in: Bull Cancer. 2017 May;104(5):494.

PMID:
28057181
25.

The orphan nuclear receptor COUP-TFII coordinates hypoxia-independent proangiogenic responses in hepatic stellate cells.

Ceni E, Mello T, Polvani S, Vasseur-Cognet M, Tarocchi M, Tempesti S, Cavalieri D, Beltrame L, Marroncini G, Pinzani M, Milani S, Galli A.

J Hepatol. 2017 Apr;66(4):754-764. doi: 10.1016/j.jhep.2016.11.003. Epub 2016 Nov 17.

PMID:
27866920
26.

Isolation, Identification and Characterization of Yeasts from Fermented Goat Milk of the Yaghnob Valley in Tajikistan.

Qvirist LA, De Filippo C, Strati F, Stefanini I, Sordo M, Andlid T, Felis GE, Mattarelli P, Cavalieri D.

Front Microbiol. 2016 Nov 3;7:1690. eCollection 2016.

27.

Alteration of Fecal Microbiota Profiles in Juvenile Idiopathic Arthritis. Associations with HLA-B27 Allele and Disease Status.

Di Paola M, Cavalieri D, Albanese D, Sordo M, Pindo M, Donati C, Pagnini I, Giani T, Simonini G, Paladini A, Lionetti P, De Filippo C, Cimaz R.

Front Microbiol. 2016 Oct 26;7:1703. eCollection 2016.

28.

Uncovering oral Neisseria tropism and persistence using metagenomic sequencing.

Donati C, Zolfo M, Albanese D, Tin Truong D, Asnicar F, Iebba V, Cavalieri D, Jousson O, De Filippo C, Huttenhower C, Segata N.

Nat Microbiol. 2016 May 27;1(7):16070. doi: 10.1038/nmicrobiol.2016.70.

PMID:
27572971
29.

Age and Gender Affect the Composition of Fungal Population of the Human Gastrointestinal Tract.

Strati F, Di Paola M, Stefanini I, Albanese D, Rizzetto L, Lionetti P, Calabrò A, Jousson O, Donati C, Cavalieri D, De Filippo C.

Front Microbiol. 2016 Aug 3;7:1227. doi: 10.3389/fmicb.2016.01227. eCollection 2016.

30.

Altered gut microbiota in Rett syndrome.

Strati F, Cavalieri D, Albanese D, De Felice C, Donati C, Hayek J, Jousson O, Leoncini S, Pindo M, Renzi D, Rizzetto L, Stefanini I, Calabrò A, De Filippo C.

Microbiome. 2016 Jul 30;4(1):41. doi: 10.1186/s40168-016-0185-y.

31.

Social wasp intestines host the local phenotypic variability of Saccharomyces cerevisiae strains.

Dapporto L, Stefanini I, Rivero D, Polsinelli M, Capretti P, De Marchi P, Viola R, Turillazzi S, Cavalieri D.

Yeast. 2016 Jul;33(7):277-87. doi: 10.1002/yea.3173.

32.

Plant microRNAs as novel immunomodulatory agents.

Cavalieri D, Rizzetto L, Tocci N, Rivero D, Asquini E, Si-Ammour A, Bonechi E, Ballerini C, Viola R.

Sci Rep. 2016 May 11;6:25761. doi: 10.1038/srep25761.

33.

Fungal Chitin Induces Trained Immunity in Human Monocytes during Cross-talk of the Host with Saccharomyces cerevisiae.

Rizzetto L, Ifrim DC, Moretti S, Tocci N, Cheng SC, Quintin J, Renga G, Oikonomou V, De Filippo C, Weil T, Blok BA, Lenucci MS, Santos MA, Romani L, Netea MG, Cavalieri D.

J Biol Chem. 2016 Apr 8;291(15):7961-72. doi: 10.1074/jbc.M115.699645. Epub 2016 Feb 17.

34.

Electroporated Antigen-Encoding mRNA Is Not a Danger Signal to Human Mature Monocyte-Derived Dendritic Cells.

Hoyer S, Gerer KF, Pfeiffer IA, Prommersberger S, Höfflin S, Jaitly T, Beltrame L, Cavalieri D, Schuler G, Vera J, Schaft N, Dörrie J.

J Immunol Res. 2015;2015:952184. doi: 10.1155/2015/952184. Epub 2015 Dec 28.

35.

Social wasps are a Saccharomyces mating nest.

Stefanini I, Dapporto L, Berná L, Polsinelli M, Turillazzi S, Cavalieri D.

Proc Natl Acad Sci U S A. 2016 Feb 23;113(8):2247-51. doi: 10.1073/pnas.1516453113. Epub 2016 Jan 19.

36.

Dynamic changes in microbiota and mycobiota during spontaneous 'Vino Santo Trentino' fermentation.

Stefanini I, Albanese D, Cavazza A, Franciosi E, De Filippo C, Donati C, Cavalieri D.

Microb Biotechnol. 2016 Mar;9(2):195-208. doi: 10.1111/1751-7915.12337. Epub 2016 Jan 18.

37.

riboFrame: An Improved Method for Microbial Taxonomy Profiling from Non-Targeted Metagenomics.

Ramazzotti M, Berná L, Donati C, Cavalieri D.

Front Genet. 2015 Nov 17;6:329. doi: 10.3389/fgene.2015.00329. eCollection 2015.

38.

Habitat fragmentation is associated to gut microbiota diversity of an endangered primate: implications for conservation.

Barelli C, Albanese D, Donati C, Pindo M, Dallago C, Rovero F, Cavalieri D, Tuohy KM, Hauffe HC, De Filippo C.

Sci Rep. 2015 Oct 7;5:14862. doi: 10.1038/srep14862.

39.

Systems Level Dissection of Candida Recognition by Dectins: A Matter of Fungal Morphology and Site of Infection.

Rizzetto L, Weil T, Cavalieri D.

Pathogens. 2015 Aug 21;4(3):639-61. doi: 10.3390/pathogens4030639. Review.

40.

Effects of near-infrared laser radiation on the survival and inflammatory potential of Candida spp. involved in the pathogenesis of chemotherapy-induced oral mucositis.

Clemente AM, Rizzetto L, Castronovo G, Perissi E, Tanturli M, Cozzolino F, Cavalieri D, Fusi F, Cialdai F, Vignali L, Torcia MG, Monici M.

Eur J Clin Microbiol Infect Dis. 2015 Oct;34(10):1999-2007. doi: 10.1007/s10096-015-2443-5. Epub 2015 Jul 15.

PMID:
26173694
41.

Hsp12p and PAU genes are involved in ecological interactions between natural yeast strains.

Rivero D, Berná L, Stefanini I, Baruffini E, Bergerat A, Csikász-Nagy A, De Filippo C, Cavalieri D.

Environ Microbiol. 2015 Aug;17(8):3069-81. doi: 10.1111/1462-2920.12950. Epub 2015 Jul 30.

PMID:
26079802
42.

Diagnostic and prognostic role of procalcitonin (PCT) and MR-pro-Adrenomedullin (MR-proADM) in bacterial infections.

Angeletti S, Spoto S, Fogolari M, Cortigiani M, Fioravanti M, De Florio L, Curcio B, Cavalieri D, Costantino S, Dicuonzo G.

APMIS. 2015 Sep;123(9):740-8. doi: 10.1111/apm.12406. Epub 2015 Jun 8.

PMID:
26058482
43.

The Root of Flowering Plants and Total Evidence.

Goremykin VV, Nikiforova SV, Cavalieri D, Pindo M, Lockhart P.

Syst Biol. 2015 Sep;64(5):879-91. doi: 10.1093/sysbio/syv028. Epub 2015 May 20.

PMID:
25995065
44.

MICCA: a complete and accurate software for taxonomic profiling of metagenomic data.

Albanese D, Fontana P, De Filippo C, Cavalieri D, Donati C.

Sci Rep. 2015 May 19;5:9743. doi: 10.1038/srep09743.

45.

Explaining diversity in metagenomic datasets by phylogenetic-based feature weighting.

Albanese D, De Filippo C, Cavalieri D, Donati C.

PLoS Comput Biol. 2015 Mar 27;11(3):e1004186. doi: 10.1371/journal.pcbi.1004186. eCollection 2015 Mar.

46.

Comparative analysis of gene expression: uncovering expression conservation and divergence between Salmonella enterica serovar Typhimurium strains LT2 and 14028S.

Sonego P, Meysman P, Moretto M, Viola R, Laukens K, Cavalieri D, Engelen K.

Methods Mol Biol. 2015;1231:125-35. doi: 10.1007/978-1-4939-1720-4_8.

PMID:
25343862
47.

Richness and diversity of mammalian fungal communities shape innate and adaptive immunity in health and disease.

Rizzetto L, De Filippo C, Cavalieri D.

Eur J Immunol. 2014 Nov;44(11):3166-81. doi: 10.1002/eji.201344403. Epub 2014 Oct 30. Review.

48.

IL-4-induced gene 1 maintains high Tob1 expression that contributes to TCR unresponsiveness in human T helper 17 cells.

Santarlasci V, Maggi L, Mazzoni A, Capone M, Querci V, Rossi MC, Beltrame L, Cavalieri D, De Palma R, Liotta F, Cosmi L, Maggi E, Romagnani S, Annunziato F.

Eur J Immunol. 2014 Mar;44(3):654-61. doi: 10.1002/eji.201344047. Epub 2013 Dec 27.

49.

Carbon nanotube scaffolds instruct human dendritic cells: modulating immune responses by contacts at the nanoscale.

Aldinucci A, Turco A, Biagioli T, Toma FM, Bani D, Guasti D, Manuelli C, Rizzetto L, Cavalieri D, Massacesi L, Mello T, Scaini D, Bianco A, Ballerini L, Prato M, Ballerini C.

Nano Lett. 2013;13(12):6098-105. doi: 10.1021/nl403396e. Epub 2013 Nov 15.

PMID:
24224474
50.

An evaluation of the PacBio RS platform for sequencing and de novo assembly of a chloroplast genome.

Ferrarini M, Moretto M, Ward JA, Šurbanovski N, Stevanović V, Giongo L, Viola R, Cavalieri D, Velasco R, Cestaro A, Sargent DJ.

BMC Genomics. 2013 Oct 1;14:670. doi: 10.1186/1471-2164-14-670.

Supplemental Content

Loading ...
Support Center