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Items: 11

1.

Genetic Architecture of Domestication-Related Traits in Maize.

Xue S, Bradbury PJ, Casstevens T, Holland JB.

Genetics. 2016 Sep;204(1):99-113. doi: 10.1534/genetics.116.191106. Epub 2016 Jul 13.

2.

TASSEL-GBS: a high capacity genotyping by sequencing analysis pipeline.

Glaubitz JC, Casstevens TM, Lu F, Harriman J, Elshire RJ, Sun Q, Buckler ES.

PLoS One. 2014 Feb 28;9(2):e90346. doi: 10.1371/journal.pone.0090346. eCollection 2014.

3.

Comprehensive genotyping of the USA national maize inbred seed bank.

Romay MC, Millard MJ, Glaubitz JC, Peiffer JA, Swarts KL, Casstevens TM, Elshire RJ, Acharya CB, Mitchell SE, Flint-Garcia SA, McMullen MD, Holland JB, Buckler ES, Gardner CA.

Genome Biol. 2013 Jun 11;14(6):R55. doi: 10.1186/gb-2013-14-6-r55.

4.

Gramene database in 2010: updates and extensions.

Youens-Clark K, Buckler E, Casstevens T, Chen C, Declerck G, Derwent P, Dharmawardhana P, Jaiswal P, Kersey P, Karthikeyan AS, Lu J, McCouch SR, Ren L, Spooner W, Stein JC, Thomason J, Wei S, Ware D.

Nucleic Acids Res. 2011 Jan;39(Database issue):D1085-94. doi: 10.1093/nar/gkq1148. Epub 2010 Nov 13.

5.

Software engineering the mixed model for genome-wide association studies on large samples.

Zhang Z, Buckler ES, Casstevens TM, Bradbury PJ.

Brief Bioinform. 2009 Nov;10(6):664-75. doi: 10.1093/bib/bbp050. Review.

PMID:
19933212
6.

The generation challenge programme platform: semantic standards and workbench for crop science.

Bruskiewich R, Senger M, Davenport G, Ruiz M, Rouard M, Hazekamp T, Takeya M, Doi K, Satoh K, Costa M, Simon R, Balaji J, Akintunde A, Mauleon R, Wanchana S, Shah T, Anacleto M, Portugal A, Ulat VJ, Thongjuea S, Braak K, Ritter S, Dereeper A, Skofic M, Rojas E, Martins N, Pappas G, Alamban R, Almodiel R, Barboza LH, Detras J, Manansala K, Mendoza MJ, Morales J, Peralta B, Valerio R, Zhang Y, Gregorio S, Hermocilla J, Echavez M, Yap JM, Farmer A, Schiltz G, Lee J, Casstevens T, Jaiswal P, Meintjes A, Wilkinson M, Good B, Wagner J, Morris J, Marshall D, Collins A, Kikuchi S, Metz T, McLaren G, van Hintum T.

Int J Plant Genomics. 2008;2008:369601. doi: 10.1155/2008/369601.

7.

Gramene: a growing plant comparative genomics resource.

Liang C, Jaiswal P, Hebbard C, Avraham S, Buckler ES, Casstevens T, Hurwitz B, McCouch S, Ni J, Pujar A, Ravenscroft D, Ren L, Spooner W, Tecle I, Thomason J, Tung CW, Wei X, Yap I, Youens-Clark K, Ware D, Stein L.

Nucleic Acids Res. 2008 Jan;36(Database issue):D947-53. Epub 2007 Nov 4.

8.

TASSEL: software for association mapping of complex traits in diverse samples.

Bradbury PJ, Zhang Z, Kroon DE, Casstevens TM, Ramdoss Y, Buckler ES.

Bioinformatics. 2007 Oct 1;23(19):2633-5. Epub 2007 Jun 22.

PMID:
17586829
9.

Gramene: a bird's eye view of cereal genomes.

Jaiswal P, Ni J, Yap I, Ware D, Spooner W, Youens-Clark K, Ren L, Liang C, Zhao W, Ratnapu K, Faga B, Canaran P, Fogleman M, Hebbard C, Avraham S, Schmidt S, Casstevens TM, Buckler ES, Stein L, McCouch S.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D717-23.

10.

GDPC: connecting researchers with multiple integrated data sources.

Casstevens TM, Buckler ES.

Bioinformatics. 2004 Nov 1;20(16):2839-40. Epub 2004 Apr 22.

PMID:
15105279
11.

The index of likeness as a mathematical function of the indices of cohesion for roll call voting.

Casstevens T, Porterfield O.

Behav Sci. 1968 May;13(3):234-7. No abstract available.

PMID:
5661018

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