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Items: 1 to 50 of 58

1.

Evidence for late Pleistocene origin of Astyanax mexicanus cavefish.

Fumey J, Hinaux H, Noirot C, Thermes C, Rétaux S, Casane D.

BMC Evol Biol. 2018 Apr 18;18(1):43. doi: 10.1186/s12862-018-1156-7.

2.

Evolutionary Genetics of the Cavefish Astyanax mexicanus.

Casane D, Rétaux S.

Adv Genet. 2016;95:117-59. doi: 10.1016/bs.adgen.2016.03.001. Epub 2016 Jun 13. Review.

PMID:
27503356
3.

[The CRISPR case, « ready-made » mutations and Lamarckian evolution of an adaptive immunity system].

Casane D, Laurenti P.

Med Sci (Paris). 2016 Jun-Jul;32(6-7):640-5. doi: 10.1051/medsci/20163206029. Epub 2016 Jul 12. French.

4.

Go West: A One Way Stepping-Stone Dispersion Model for the Cavefish Lucifuga dentata in Western Cuba.

Hernández D, Casane D, Chevalier-Monteagudo P, Bernatchez L, García-Machado E.

PLoS One. 2016 Apr 15;11(4):e0153545. doi: 10.1371/journal.pone.0153545. eCollection 2016.

5.

Mode of reduction in the number of pharyngeal segments within the sarcopterygians.

Shone V, Oulion S, Casane D, Laurenti P, Graham A.

Zoological Lett. 2016 Mar 21;2:6. doi: 10.1186/s40851-016-0043-6. eCollection 2016.

6.

Tooth and scale morphogenesis in shark: an alternative process to the mammalian enamel knot system.

Debiais-Thibaud M, Chiori R, Enault S, Oulion S, Germon I, Martinand-Mari C, Casane D, Borday-Birraux V.

BMC Evol Biol. 2015 Dec 24;15:292. doi: 10.1186/s12862-015-0557-0.

7.

The coelacanth: Can a "living fossil" have active transposable elements in its genome?

Naville M, Chalopin D, Casane D, Laurenti P, Volff JN.

Mob Genet Elements. 2015 May 27;5(4):55-59. eCollection 2015 Jul-Aug.

8.

[ENCODE apophenia or a panglossian analysis of the human genome].

Casane D, Fumey J, Laurenti P.

Med Sci (Paris). 2015 Jun-Jul;31(6-7):680-6. doi: 10.1051/medsci/20153106023. Epub 2015 Jul 7. French.

9.

[Compulsive molecular hoarding enables the evolution of protein-coding DNA from non-coding DNA].

Casane D, Laurenti P.

Med Sci (Paris). 2014 Dec;30(12):1177-83. doi: 10.1051/medsci/20143012022. Epub 2014 Dec 24. French.

10.

Lens defects in Astyanax mexicanus Cavefish: evolution of crystallins and a role for alphaA-crystallin.

Hinaux H, Blin M, Fumey J, Legendre L, Heuzé A, Casane D, Rétaux S.

Dev Neurobiol. 2015 May;75(5):505-21. doi: 10.1002/dneu.22239. Epub 2014 Nov 4.

11.

Modular organization and reticulate evolution of the ORF1 of Jockey superfamily transposable elements.

Metcalfe CJ, Casane D.

Mob DNA. 2014 Jul 1;5:19. doi: 10.1186/1759-8753-5-19. eCollection 2014.

12.

Phylogeography of Cuban Rivulus: evidence for allopatric speciation and secondary dispersal across a marine barrier.

Ponce de León JL, León G, Rodríguez R, Metcalfe CJ, Hernández D, Casane D, García-Machado E.

Mol Phylogenet Evol. 2014 Oct;79:404-14. doi: 10.1016/j.ympev.2014.07.007. Epub 2014 Jul 19.

PMID:
25050928
13.

Accommodating the load: The transposable element content of very large genomes.

Metcalfe CJ, Casane D.

Mob Genet Elements. 2013 Mar 1;3(2):e24775.

14.

[A brand new face for the ancestor of jawed vertebrates].

Casane D, Laurenti P.

Med Sci (Paris). 2014 Jan;30(1):38-40. doi: 10.1051/medsci/20143001012. Epub 2014 Jan 24. French. No abstract available.

15.

Evolution of eye development in the darkness of caves: adaptation, drift, or both?

Rétaux S, Casane D.

Evodevo. 2013 Sep 30;4(1):26. doi: 10.1186/2041-9139-4-26.

16.

Heterogeneous conservation of Dlx paralog co-expression in jawed vertebrates.

Debiais-Thibaud M, Metcalfe CJ, Pollack J, Germon I, Ekker M, Depew M, Laurenti P, Borday-Birraux V, Casane D.

PLoS One. 2013 Jun 28;8(6):e68182. doi: 10.1371/journal.pone.0068182. Print 2013.

17.

Holocephalan embryo provides new information on the evolution of the glossopharyngeal nerve, metotic fissure and parachordal plate in gnathostomes.

Pradel A, Didier D, Casane D, Tafforeau P, Maisey JG.

PLoS One. 2013 Jun 17;8(6):e66988. doi: 10.1371/journal.pone.0066988. Print 2013.

18.

Pattern and polarity in the development and evolution of the gnathostome jaw: both conservation and heterotopy in the branchial arches of the shark, Scyliorhinus canicula.

Compagnucci C, Debiais-Thibaud M, Coolen M, Fish J, Griffin JN, Bertocchini F, Minoux M, Rijli FM, Borday-Birraux V, Casane D, Mazan S, Depew MJ.

Dev Biol. 2013 May 15;377(2):428-48. doi: 10.1016/j.ydbio.2013.02.022. Epub 2013 Mar 7.

19.

Gene make-up: rapid and massive intron gains after horizontal transfer of a bacterial α-amylase gene to Basidiomycetes.

Da Lage JL, Binder M, Hua-Van A, Janeček S, Casane D.

BMC Evol Biol. 2013 Feb 13;13:40. doi: 10.1186/1471-2148-13-40.

20.

Why coelacanths are not 'living fossils': a review of molecular and morphological data.

Casane D, Laurenti P.

Bioessays. 2013 Apr;35(4):332-8. doi: 10.1002/bies.201200145. Epub 2013 Feb 4.

PMID:
23382020
21.

De novo sequencing of Astyanax mexicanus surface fish and Pachón cavefish transcriptomes reveals enrichment of mutations in cavefish putative eye genes.

Hinaux H, Poulain J, Da Silva C, Noirot C, Jeffery WR, Casane D, Rétaux S.

PLoS One. 2013;8(1):e53553. doi: 10.1371/journal.pone.0053553. Epub 2013 Jan 9.

22.

[Tree thinking: the evolution of vertebrate as a case study].

Casane D, Laurenti P.

Med Sci (Paris). 2012 Dec;28(12):1121-7. doi: 10.1051/medsci/20122812024. Epub 2012 Dec 21. French.

23.

Evolution of the Australian lungfish (Neoceratodus forsteri) genome: a major role for CR1 and L2 LINE elements.

Metcalfe CJ, Filée J, Germon I, Joss J, Casane D.

Mol Biol Evol. 2012 Nov;29(11):3529-39. doi: 10.1093/molbev/mss159. Epub 2012 Jun 24.

PMID:
22734051
24.

[Hox genes organization: studying non-model vertebrates leads to a paradigm shift].

Oulion S, Laurenti P, Casane D.

Med Sci (Paris). 2012 Apr;28(4):350-3. doi: 10.1051/medsci/2012284005. Epub 2012 Apr 25. French. No abstract available.

25.

First analysis of multiple paternity in an oviparous shark, the small-spotted catshark (Scyliorhinus canicula L.).

Griffiths AM, Jacoby DM, Casane D, McHugh M, Croft DP, Genner MJ, Sims DW.

J Hered. 2012 Mar-Apr;103(2):166-73. doi: 10.1093/jhered/esr112. Epub 2011 Nov 3.

PMID:
22058410
26.

The homology of odontodes in gnathostomes: insights from Dlx gene expression in the dogfish, Scyliorhinus canicula.

Debiais-Thibaud M, Oulion S, Bourrat F, Laurenti P, Casane D, Borday-Birraux V.

BMC Evol Biol. 2011 Oct 18;11:307. doi: 10.1186/1471-2148-11-307.

27.

Molecular phylogeny and phylogeography of the Cuban cave-fishes of the genus Lucifuga: evidence for cryptic allopatric diversity.

García-Machado E, Hernández D, García-Debrás A, Chevalier-Monteagudo P, Metcalfe C, Bernatchez L, Casane D.

Mol Phylogenet Evol. 2011 Nov;61(2):470-83. doi: 10.1016/j.ympev.2011.06.015. Epub 2011 Jun 30.

PMID:
21741487
28.

DNA barcoding of Cuban freshwater fishes: evidence for cryptic species and taxonomic conflicts.

Lara A, Ponce de León JL, Rodríguez R, Casane D, Côté G, Bernatchez L, García-Machado E.

Mol Ecol Resour. 2010 May;10(3):421-30. doi: 10.1111/j.1755-0998.2009.02785.x. Epub 2009 Oct 22.

PMID:
21565041
29.

Evolution of repeated structures along the body axis of jawed vertebrates, insights from the Scyliorhinus canicula Hox code.

Oulion S, Borday-Birraux V, Debiais-Thibaud M, Mazan S, Laurenti P, Casane D.

Evol Dev. 2011 May-Jun;13(3):247-59. doi: 10.1111/j.1525-142X.2011.00477.x.

PMID:
21535463
30.

Two lamprey Hedgehog genes share non-coding regulatory sequences and expression patterns with gnathostome Hedgehogs.

Kano S, Xiao JH, Osório J, Ekker M, Hadzhiev Y, Müller F, Casane D, Magdelenat G, Rétaux S.

PLoS One. 2010 Oct 13;5(10):e13332. doi: 10.1371/journal.pone.0013332.

31.

Evolution of Hox gene clusters in gnathostomes: insights from a survey of a shark (Scyliorhinus canicula) transcriptome.

Oulion S, Debiais-Thibaud M, d'Aubenton-Carafa Y, Thermes C, Da Silva C, Bernard-Samain S, Gavory F, Wincker P, Mazan S, Casane D.

Mol Biol Evol. 2010 Dec;27(12):2829-38. doi: 10.1093/molbev/msq172. Epub 2010 Jul 8.

PMID:
20616144
32.

Evidence of recombination in Hepatitis C Virus populations infecting a hemophiliac patient.

Moreno P, Alvarez M, López L, Moratorio G, Casane D, Castells M, Castro S, Cristina J, Colina R.

Virol J. 2009 Nov 18;6:203. doi: 10.1186/1743-422X-6-203.

33.

Deciphering the complete mitochondrial genome and phylogeny of the extinct cave bear in the Paleolithic painted cave of Chauvet.

Bon C, Caudy N, de Dieuleveult M, Fosse P, Philippe M, Maksud F, Beraud-Colomb E, Bouzaid E, Kefi R, Laugier C, Rousseau B, Casane D, van der Plicht J, Elalouf JM.

Proc Natl Acad Sci U S A. 2008 Nov 11;105(45):17447-52. doi: 10.1073/pnas.0806143105. Epub 2008 Oct 27.

34.

Low divergence in Dlx gene expression between dentitions of the medaka (Oryzias latipes) versus high level of expression shuffling in osteichtyans.

Debiais-Thibaud M, Germon I, Laurenti P, Casane D, Borday-Birraux V.

Evol Dev. 2008 Jul-Aug;10(4):464-76. doi: 10.1111/j.1525-142X.2008.00257.x.

PMID:
18638323
35.

Where do animal alpha-amylases come from? An interkingdom trip.

Da Lage JL, Danchin EG, Casane D.

FEBS Lett. 2007 Aug 21;581(21):3927-35. Epub 2007 Jul 20.

36.

Comparison of the expression of medaka (Oryzias latipes) pitx genes with other vertebrates shows high conservation and a case of functional shuffling in the pituitary.

Jaszczyszyn Y, Haeussler M, Heuzé A, Debiais-Thibaud M, Casane D, Bourrat F, Joly JS.

Gene. 2007 Dec 30;406(1-2):42-50. Epub 2007 Jun 13.

PMID:
17656043
37.

Development of oral and pharyngeal teeth in the medaka (Oryzias latipes): comparison of morphology and expression of eve1 gene.

Debiais-Thibaud M, Borday-Birraux V, Germon I, Bourrat F, Metcalfe CJ, Casane D, Laurenti P.

J Exp Zool B Mol Dev Evol. 2007 Dec 15;308(6):693-708.

PMID:
17620302
38.
39.
40.

An unusual choanoflagellate protein released by Hedgehog autocatalytic processing.

Snell EA, Brooke NM, Taylor WR, Casane D, Philippe H, Holland PW.

Proc Biol Sci. 2006 Feb 22;273(1585):401-7.

41.

Phylogenomics of eukaryotes: impact of missing data on large alignments.

Philippe H, Snell EA, Bapteste E, Lopez P, Holland PW, Casane D.

Mol Biol Evol. 2004 Sep;21(9):1740-52. Epub 2004 Jun 2.

PMID:
15175415
42.

Evidence of intratypic recombination in natural populations of hepatitis C virus.

Colina R, Casane D, Vasquez S, García-Aguirre L, Chunga A, Romero H, Khan B, Cristina J.

J Gen Virol. 2004 Jan;85(Pt 1):31-7.

PMID:
14718617
43.

Heterotachy and functional shift in protein evolution.

Philippe H, Casane D, Gribaldo S, Lopez P, Meunier J.

IUBMB Life. 2003 Apr-May;55(4-5):257-65. Review.

44.

Functional divergence prediction from evolutionary analysis: a case study of vertebrate hemoglobin.

Gribaldo S, Casane D, Lopez P, Philippe H.

Mol Biol Evol. 2003 Nov;20(11):1754-9. Epub 2003 Jun 27.

PMID:
12832652
45.

Evidence of recombination in natural populations of hepatitis A virus.

Costa-Mattioli M, Ferré V, Casane D, Perez-Bercoff R, Coste-Burel M, Imbert-Marcille BM, Andre EC, Bressollette-Bodin C, Billaudel S, Cristina J.

Virology. 2003 Jun 20;311(1):51-9.

46.

Comparison of even-skipped related gene expression pattern in vertebrates shows an association between expression domain loss and modification of selective constraints on sequences.

Avaron F, Thaëron-Antono C, Beck CW, Borday-Birraux V, Géraudie J, Casane D, Laurenti P.

Evol Dev. 2003 Mar-Apr;5(2):145-56.

PMID:
12622731
47.

Evolution of heteroplasmy at a mitochondrial tandem repeat locus in cultured rabbit cells.

Casane D, Guéride M.

Curr Genet. 2002 Oct;42(1):66-72. Epub 2002 Sep 20.

PMID:
12420148
48.

Molecular evolution of hepatitis A virus: a new classification based on the complete VP1 protein.

Costa-Mattioli M, Cristina J, Romero H, Perez-Bercof R, Casane D, Colina R, Garcia L, Vega I, Glikman G, Romanowsky V, Castello A, Nicand E, Gassin M, Billaudel S, Ferré V.

J Virol. 2002 Sep;76(18):9516-25.

49.

Heterotachy, an important process of protein evolution.

Lopez P, Casane D, Philippe H.

Mol Biol Evol. 2002 Jan;19(1):1-7.

PMID:
11752184
50.

Molecular evidence for precambrian origin of amelogenin, the major protein of vertebrate enamel.

Delgado S, Casane D, Bonnaud L, Laurin M, Sire JY, Girondot M.

Mol Biol Evol. 2001 Dec;18(12):2146-53.

PMID:
11719563

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