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Items: 1 to 50 of 95

1.

Sponges and Their Microbiomes Show Similar Community Metrics Across Impacted and Well-Preserved Reefs.

Turon M, Cáliz J, Triadó-Margarit X, Casamayor EO, Uriz MJ.

Front Microbiol. 2019 Aug 22;10:1961. doi: 10.3389/fmicb.2019.01961. eCollection 2019.

2.

A Randomized Trait Community Clustering approach to unveil consistent environmental thresholds in community assembly.

Triadó-Margarit X, Capitán JA, Menéndez-Serra M, Ortiz-Álvarez R, Ontiveros VJ, Casamayor EO, Alonso D.

ISME J. 2019 Jun 26. doi: 10.1038/s41396-019-0454-4. [Epub ahead of print]

PMID:
31243330
3.

The DNRA-Denitrification Dichotomy Differentiates Nitrogen Transformation Pathways in Mountain Lake Benthic Habitats.

Palacin-Lizarbe C, Camarero L, Hallin S, Jones CM, Cáliz J, Casamayor EO, Catalan J.

Front Microbiol. 2019 Jun 4;10:1229. doi: 10.3389/fmicb.2019.01229. eCollection 2019.

4.

A long-term survey unveils strong seasonal patterns in the airborne microbiome coupled to general and regional atmospheric circulations.

Cáliz J, Triadó-Margarit X, Camarero L, Casamayor EO.

Proc Natl Acad Sci U S A. 2018 Nov 27;115(48):12229-12234. doi: 10.1073/pnas.1812826115. Epub 2018 Nov 12.

5.

Showcasing the role of seawater in bacteria recruitment and microbiome stability in sponges.

Turon M, Cáliz J, Garate L, Casamayor EO, Uriz MJ.

Sci Rep. 2018 Oct 12;8(1):15201. doi: 10.1038/s41598-018-33545-1.

6.

Microbial composition, potential functional roles and genetic novelty in gypsum-rich and hypersaline soils of Monegros and Gallocanta (Spain).

Menéndez-Serra M, Triadó-Margarit X, Castañeda C, Herrero J, Casamayor EO.

Sci Total Environ. 2019 Feb 10;650(Pt 1):343-353. doi: 10.1016/j.scitotenv.2018.09.050. Epub 2018 Sep 5.

PMID:
30199680
7.

Development of a 16S rRNA-targeted fluorescence in situ hybridization probe for quantification of the ammonia-oxidizer Nitrosotalea devanaterra and its relatives.

Restrepo-Ortiz CX, Merbt SN, Barrero-Canossa J, Fuchs BM, Casamayor EO.

Syst Appl Microbiol. 2018 Jul;41(4):408-413. doi: 10.1016/j.syapm.2018.04.003. Epub 2018 Apr 28.

PMID:
29747878
8.

High planktonic diversity in mountain lakes contains similar contributions of autotrophic, heterotrophic and parasitic eukaryotic life forms.

Ortiz-Álvarez R, Triadó-Margarit X, Camarero L, Casamayor EO, Catalan J.

Sci Rep. 2018 Mar 13;8(1):4457. doi: 10.1038/s41598-018-22835-3.

9.

Consistent changes in the taxonomic structure and functional attributes of bacterial communities during primary succession.

Ortiz-Álvarez R, Fierer N, de Los Ríos A, Casamayor EO, Barberán A.

ISME J. 2018 Jun;12(7):1658-1667. doi: 10.1038/s41396-018-0076-2. Epub 2018 Feb 20.

10.

Degradation of sulfonamides as a microbial resistance mechanism.

Vila-Costa M, Gioia R, Aceña J, Pérez S, Casamayor EO, Dachs J.

Water Res. 2017 May 15;115:309-317. doi: 10.1016/j.watres.2017.03.007. Epub 2017 Mar 6.

PMID:
28288310
11.

Stream drying drives microbial ammonia oxidation and first-flush nitrate export.

Merbt SN, Proia L, Prosser JI, Martí E, Casamayor EO, von Schiller D.

Ecology. 2016 Sep;97(9):2192-2198. doi: 10.1002/ecy.1486.

PMID:
27859084
12.

Bioaerosols in the Barcelona subway system.

Triadó-Margarit X, Veillette M, Duchaine C, Talbot M, Amato F, Minguillón MC, Martins V, de Miguel E, Casamayor EO, Moreno T.

Indoor Air. 2017 May;27(3):564-575. doi: 10.1111/ina.12343. Epub 2016 Oct 26.

PMID:
27687789
13.

Speciation and ecological success in dimly lit waters: horizontal gene transfer in a green sulfur bacteria bloom unveiled by metagenomic assembly.

Llorens-Marès T, Liu Z, Allen LZ, Rusch DB, Craig MT, Dupont CL, Bryant DA, Casamayor EO.

ISME J. 2017 Jan;11(1):201-211. doi: 10.1038/ismej.2016.93. Epub 2016 Jul 8.

14.

The dominant detritus-feeding invertebrate in Arctic peat soils derives its essential amino acids from gut symbionts.

Larsen T, Ventura M, Maraldo K, Triadó-Margarit X, Casamayor EO, Wang YV, Andersen N, O'Brien DM.

J Anim Ecol. 2016 Sep;85(5):1275-85. doi: 10.1111/1365-2656.12563. Epub 2016 Jul 21.

PMID:
27322934
15.

High occurrence of Pacearchaeota and Woesearchaeota (Archaea superphylum DPANN) in the surface waters of oligotrophic high-altitude lakes.

Ortiz-Alvarez R, Casamayor EO.

Environ Microbiol Rep. 2016 Apr;8(2):210-7. doi: 10.1111/1758-2229.12370. Epub 2016 Jan 28.

PMID:
26711582
16.

High Bacterial Diversity and Phylogenetic Novelty in Dark Euxinic Freshwaters Analyzed by 16S Tag Community Profiling.

Llorens-Marès T, Triadó-Margarit X, Borrego CM, Dupont CL, Casamayor EO.

Microb Ecol. 2016 Apr;71(3):566-74. doi: 10.1007/s00248-015-0696-2. Epub 2015 Nov 9.

PMID:
26552395
17.

Insights in the ecology and evolutionary history of the Miscellaneous Crenarchaeotic Group lineage.

Fillol M, Auguet JC, Casamayor EO, Borrego CM.

ISME J. 2016 Mar;10(3):665-77. doi: 10.1038/ismej.2015.143. Epub 2015 Aug 18.

18.

High protists diversity in the plankton of sulfurous lakes and lagoons examined by 18s rRNA gene sequence analyses.

Triadó-Margarit X, Casamayor EO.

Environ Microbiol Rep. 2015 Dec;7(6):908-17. doi: 10.1111/1758-2229.12324. Epub 2015 Aug 27.

PMID:
26224512
19.

Microbial food web components, bulk metabolism, and single-cell physiology of piconeuston in surface microlayers of high-altitude lakes.

Sarmento H, Casamayor EO, Auguet JC, Vila-Costa M, Felip M, Camarero L, Gasol JM.

Front Microbiol. 2015 May 5;6:361. doi: 10.3389/fmicb.2015.00361. eCollection 2015.

20.

Influence of edaphic, climatic, and agronomic factors on the composition and abundance of nitrifying microorganisms in the rhizosphere of commercial olive crops.

Caliz J, Montes-Borrego M, Triadó-Margarit X, Metsis M, Landa BB, Casamayor EO.

PLoS One. 2015 May 7;10(5):e0125787. doi: 10.1371/journal.pone.0125787. eCollection 2015.

21.

Connecting biodiversity and potential functional role in modern euxinic environments by microbial metagenomics.

Llorens-Marès T, Yooseph S, Goll J, Hoffman J, Vila-Costa M, Borrego CM, Dupont CL, Casamayor EO.

ISME J. 2015 Jul;9(7):1648-61. doi: 10.1038/ismej.2014.254. Epub 2015 Jan 9.

22.

A phylogenetic perspective on species diversity, β-diversity and biogeography for the microbial world.

Barberán A, Casamayor EO.

Mol Ecol. 2014 Dec;23(23):5868-76. doi: 10.1111/mec.12971. Epub 2014 Nov 10.

PMID:
25327842
23.

Comparison of Artemia-bacteria associations in brines, laboratory cultures and the gut environment: a study based on Chilean hypersaline environments.

Quiroz M, Triadó-Margarit X, Casamayor EO, Gajardo G.

Extremophiles. 2015 Jan;19(1):135-47. doi: 10.1007/s00792-014-0694-1. Epub 2014 Sep 20.

PMID:
25239570
24.

Wastewater treatment plant effluents change abundance and composition of ammonia-oxidizing microorganisms in mediterranean urban stream biofilms.

Merbt SN, Auguet JC, Blesa A, Martí E, Casamayor EO.

Microb Ecol. 2015 Jan;69(1):66-74. doi: 10.1007/s00248-014-0464-8. Epub 2014 Jul 26.

PMID:
25062836
25.

The microbial contribution to macroecology.

Barberán A, Casamayor EO, Fierer N.

Front Microbiol. 2014 May 5;5:203. doi: 10.3389/fmicb.2014.00203. eCollection 2014. Review.

26.

Environmental heterogeneity and microbial inheritance influence sponge-associated bacterial composition of Spongia lamella.

Noyer C, Casamayor EO, Becerro MA.

Microb Ecol. 2014 Oct;68(3):611-20. doi: 10.1007/s00248-014-0428-z. Epub 2014 May 7.

PMID:
24801965
27.

Structure, inter-annual recurrence, and global-scale connectivity of airborne microbial communities.

Barberán A, Henley J, Fierer N, Casamayor EO.

Sci Total Environ. 2014 Jul 15;487:187-95. doi: 10.1016/j.scitotenv.2014.04.030. Epub 2014 May 3.

PMID:
24784743
28.

Nitrogen-cycling genes in epilithic biofilms of oligotrophic high-altitude lakes (central Pyrenees, Spain).

Vila-Costa M, Bartrons M, Catalan J, Casamayor EO.

Microb Ecol. 2014 Jul;68(1):60-9. doi: 10.1007/s00248-014-0417-2. Epub 2014 Apr 18.

PMID:
24743884
29.

Dynamics of bacterial community succession in a salt marsh chronosequence: evidences for temporal niche partitioning.

Dini-Andreote F, de Cássia Pereira e Silva M, Triadó-Margarit X, Casamayor EO, van Elsas JD, Salles JF.

ISME J. 2014 Oct;8(10):1989-2001. doi: 10.1038/ismej.2014.54. Epub 2014 Apr 17.

30.

Environmental controls and composition of anoxygenic photoheterotrophs in ultraoligotrophic high-altitude lakes (Central Pyrenees).

Caliz J, Casamayor EO.

Environ Microbiol Rep. 2014 Apr;6(2):145-51. doi: 10.1111/1758-2229.12142. Epub 2014 Jan 19.

PMID:
24596287
31.

The phylogenetic and ecological context of cultured and whole genome-sequenced planktonic bacteria from the coastal NW Mediterranean Sea.

Lekunberri I, Gasol JM, Acinas SG, Gómez-Consarnau L, Crespo BG, Casamayor EO, Massana R, Pedrós-Alió C, Pinhassi J.

Syst Appl Microbiol. 2014 May;37(3):216-28. doi: 10.1016/j.syapm.2013.11.005. Epub 2014 Jan 23.

PMID:
24462268
32.

Environmental distribution of two widespread uncultured freshwater Euryarchaeota clades unveiled by specific primers and quantitative PCR.

Restrepo-Ortiz CX, Casamayor EO.

Environ Microbiol Rep. 2013 Dec;5(6):861-7. doi: 10.1111/1758-2229.12088. Epub 2013 Aug 18.

PMID:
24249295
33.

Distribution of microbial arsenic reduction, oxidation and extrusion genes along a wide range of environmental arsenic concentrations.

Escudero LV, Casamayor EO, Chong G, Pedrós-Alió C, Demergasso C.

PLoS One. 2013 Oct 31;8(10):e78890. doi: 10.1371/journal.pone.0078890. eCollection 2013.

34.

Targeting spatiotemporal dynamics of planktonic SAGMGC-1 and segregation of ammonia-oxidizing thaumarchaeota ecotypes by newly designed primers and quantitative polymerase chain reaction.

Restrepo-Ortiz CX, Auguet JC, Casamayor EO.

Environ Microbiol. 2014 Mar;16(3):689-700. doi: 10.1111/1462-2920.12191. Epub 2013 Jul 15.

PMID:
23848190
35.

Contrasting activity patterns determined by BrdU incorporation in bacterial ribotypes from the Arctic Ocean in winter.

Galand PE, Alonso-Sáez L, Bertilsson S, Lovejoy C, Casamayor EO.

Front Microbiol. 2013 May 20;4:118. doi: 10.3389/fmicb.2013.00118. eCollection 2013.

36.

Stream hydrological fragmentation drives bacterioplankton community composition.

Fazi S, Vázquez E, Casamayor EO, Amalfitano S, Butturini A.

PLoS One. 2013 May 31;8(5):e64109. doi: 10.1371/journal.pone.0064109. Print 2013.

37.

Microbial biodiversity in saline shallow lakes of the Monegros Desert, Spain.

Casamayor EO, Triadó-Margarit X, Castañeda C.

FEMS Microbiol Ecol. 2013 Sep;85(3):503-18. doi: 10.1111/1574-6941.12139. Epub 2013 May 20.

38.

High genetic diversity and novelty in planktonic protists inhabiting inland and coastal high salinity water bodies.

Triadó-Margarit X, Casamayor EO.

FEMS Microbiol Ecol. 2013 Jul;85(1):27-36. doi: 10.1111/1574-6941.12095. Epub 2013 Mar 11.

39.

Bacterial and archaeal community structure in the surface microlayer of high mountain lakes examined under two atmospheric aerosol loading scenarios.

Vila-Costa M, Barberan A, Auguet JC, Sharma S, Moran MA, Casamayor EO.

FEMS Microbiol Ecol. 2013 May;84(2):387-97. doi: 10.1111/1574-6941.12068. Epub 2013 Jan 24.

40.

Partitioning of Thaumarchaeota populations along environmental gradients in high mountain lakes.

Auguet JC, Casamayor EO.

FEMS Microbiol Ecol. 2013 Apr;84(1):154-64. doi: 10.1111/1574-6941.12047. Epub 2012 Dec 17.

41.

Diel gene expression profiles of a phosphorus limited mountain lake using metatranscriptomics.

Vila-Costa M, Sharma S, Moran MA, Casamayor EO.

Environ Microbiol. 2013 Apr;15(4):1190-203. doi: 10.1111/1462-2920.12033. Epub 2012 Nov 26.

PMID:
23176588
42.

Habitat-associated phylogenetic community patterns of microbial ammonia oxidizers.

Fernàndez-Guerra A, Casamayor EO.

PLoS One. 2012;7(10):e47330. doi: 10.1371/journal.pone.0047330. Epub 2012 Oct 9.

43.

Endosymbiotic calcifying bacteria: a new cue to the origin of calcification in metazoa?

Uriz MJ, Agell G, Blanquer A, Turon X, Casamayor EO.

Evolution. 2012 Oct;66(10):2993-9. doi: 10.1111/j.1558-5646.2012.01676.x. Epub 2012 May 14.

44.

Patterns and architecture of genomic islands in marine bacteria.

Fernández-Gómez B, Fernàndez-Guerra A, Casamayor EO, González JM, Pedrós-Alió C, Acinas SG.

BMC Genomics. 2012 Jul 29;13:347. doi: 10.1186/1471-2164-13-347.

45.

Genetic diversity of planktonic eukaryotes in high mountain lakes (Central Pyrenees, Spain).

Triadó-Margarit X, Casamayor EO.

Environ Microbiol. 2012 Sep;14(9):2445-56. doi: 10.1111/j.1462-2920.2012.02797.x. Epub 2012 Jun 5.

PMID:
22672082
46.

High bacterial diversity in epilithic biofilms of oligotrophic mountain lakes.

Bartrons M, Catalan J, Casamayor EO.

Microb Ecol. 2012 Nov;64(4):860-9. doi: 10.1007/s00248-012-0072-4. Epub 2012 May 24.

PMID:
22622765
47.

Vertical segregation and phylogenetic characterization of ammonia-oxidizing Archaea in a deep oligotrophic lake.

Auguet JC, Triadó-Margarit X, Nomokonova N, Camarero L, Casamayor EO.

ISME J. 2012 Sep;6(9):1786-97. doi: 10.1038/ismej.2012.33. Epub 2012 Apr 12.

48.

Winter to spring changes in the slush bacterial community composition of a high-mountain lake (Lake Redon, Pyrenees).

Llorens-Marès T, Auguet JC, Casamayor EO.

Environ Microbiol Rep. 2012 Feb;4(1):50-6. doi: 10.1111/j.1758-2229.2011.00278.x. Epub 2011 Aug 19.

PMID:
23757229
49.

Exploration of community traits as ecological markers in microbial metagenomes.

Barberán A, Fernández-Guerra A, Bohannan BJ, Casamayor EO.

Mol Ecol. 2012 Apr;21(8):1909-17. doi: 10.1111/j.1365-294X.2011.05383.x. Epub 2011 Nov 28.

PMID:
22121910
50.

Differential photoinhibition of bacterial and archaeal ammonia oxidation.

Merbt SN, Stahl DA, Casamayor EO, Martí E, Nicol GW, Prosser JI.

FEMS Microbiol Lett. 2012 Feb;327(1):41-6. doi: 10.1111/j.1574-6968.2011.02457.x. Epub 2011 Dec 2.

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