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Items: 1 to 50 of 59

1.

Evidence that Myotis lucifugus "Subspecies" are Five Nonsister Species, Despite Gene Flow.

Morales AE, Carstens BC.

Syst Biol. 2018 Sep 1;67(5):756-769. doi: 10.1093/sysbio/syy010.

PMID:
29462459
2.

Evaluating the adaptive evolutionary convergence of carnivorous plant taxa through functional genomics.

Wheeler GL, Carstens BC.

PeerJ. 2018 Jan 31;6:e4322. doi: 10.7717/peerj.4322. eCollection 2018.

3.

Geographical range size and latitude predict population genetic structure in a global survey.

Pelletier TA, Carstens BC.

Biol Lett. 2018 Jan;14(1). pii: 20170566. doi: 10.1098/rsbl.2017.0566.

PMID:
29343561
4.

Combining allele frequency and tree-based approaches improves phylogeographic inference from natural history collections.

Ruffley M, Smith ML, Espíndola A, Carstens BC, Sullivan J, Tank DC.

Mol Ecol. 2018 Feb;27(4):1012-1024. doi: 10.1111/mec.14491. Epub 2018 Feb 11.

PMID:
29334417
5.

Objective choice of phylogeographic models.

Carstens BC, Morales AE, Jackson ND, O'Meara BC.

Mol Phylogenet Evol. 2017 Nov;116:136-140. doi: 10.1016/j.ympev.2017.08.018. Epub 2017 Sep 5.

PMID:
28887148
6.

Demographic model selection using random forests and the site frequency spectrum.

Smith ML, Ruffley M, Espíndola A, Tank DC, Sullivan J, Carstens BC.

Mol Ecol. 2017 Sep;26(17):4562-4573. doi: 10.1111/mec.14223. Epub 2017 Jul 26.

PMID:
28665011
7.

Do ecological communities disperse across biogeographic barriers as a unit?

Satler JD, Carstens BC.

Mol Ecol. 2017 Jul;26(13):3533-3545. doi: 10.1111/mec.14137. Epub 2017 May 5.

PMID:
28390087
8.

PHRAPL: Phylogeographic Inference Using Approximate Likelihoods.

Jackson ND, Morales AE, Carstens BC, O'Meara BC.

Syst Biol. 2017 Nov 1;66(6):1045-1053. doi: 10.1093/sysbio/syx001.

PMID:
28204782
9.

Species Delimitation with Gene Flow.

Jackson ND, Carstens BC, Morales AE, O'Meara BC.

Syst Biol. 2017 Sep 1;66(5):799-812. doi: 10.1093/sysbio/syw117.

PMID:
28003535
10.

Speciation with Gene Flow in North American Myotis Bats.

Morales AE, Jackson ND, Dewey TA, O'Meara BC, Carstens BC.

Syst Biol. 2017 May 1;66(3):440-452. doi: 10.1093/sysbio/syw100.

PMID:
27821704
11.

Identifying cryptic diversity with predictive phylogeography.

Espíndola A, Ruffley M, Smith ML, Carstens BC, Tank DC, Sullivan J.

Proc Biol Sci. 2016 Oct 26;283(1841). pii: 20161529.

12.

Phylogeographic model selection leads to insight into the evolutionary history of four-eyed frogs.

Thomé MT, Carstens BC.

Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):8010-7. doi: 10.1073/pnas.1601064113.

13.

Phylogeographic concordance factors quantify phylogeographic congruence among co-distributed species in the Sarracenia alata pitcher plant system.

Satler JD, Carstens BC.

Evolution. 2016 May;70(5):1105-19. doi: 10.1111/evo.12924. Epub 2016 Apr 29.

PMID:
27076412
14.

Model-based analysis supports interglacial refugia over long-dispersal events in the diversification of two South American cactus species.

Perez MF, Bonatelli IA, Moraes EM, Carstens BC.

Heredity (Edinb). 2016 Jun;116(6):550-7. doi: 10.1038/hdy.2016.17. Epub 2016 Apr 13.

15.

Community trees: Identifying codiversification in the Páramo dipteran community.

Carstens BC, Gruenstaeudl M, Reid NM.

Evolution. 2016 May;70(5):1080-93. doi: 10.1111/evo.12916. Epub 2016 Apr 29.

PMID:
27061575
16.

Anonymous nuclear markers data supporting species tree phylogeny and divergence time estimates in a cactus species complex in South America.

Perez MF, Carstens BC, Rodrigues GL, Moraes EM.

Data Brief. 2015 Dec 15;6:456-60. doi: 10.1016/j.dib.2015.12.002. eCollection 2016 Mar.

17.

Genetic diversity in migratory bats: Results from RADseq data for three tree bat species at an Ohio windfarm.

Sovic MG, Carstens BC, Gibbs HL.

PeerJ. 2016 Jan 26;4:e1647. doi: 10.7717/peerj.1647. eCollection 2016.

18.

Biogeographic barriers drive co-diversification within associated eukaryotes of the Sarracenia alata pitcher plant system.

Satler JD, Zellmer AJ, Carstens BC.

PeerJ. 2016 Jan 14;4:e1576. doi: 10.7717/peerj.1576. eCollection 2016.

19.

Comparative Gut Microbiota of 59 Neotropical Bird Species.

Hird SM, Sánchez C, Carstens BC, Brumfield RT.

Front Microbiol. 2015 Dec 21;6:1403. doi: 10.3389/fmicb.2015.01403. eCollection 2015.

20.

Anonymous nuclear markers reveal taxonomic incongruence and long-term disjunction in a cactus species complex with continental-island distribution in South America.

Perez MF, Carstens BC, Rodrigues GL, Moraes EM.

Mol Phylogenet Evol. 2016 Feb;95:11-9. doi: 10.1016/j.ympev.2015.11.005. Epub 2015 Nov 12.

21.

Using Next Generation RAD Sequencing to Isolate Multispecies Microsatellites for Pilosocereus (Cactaceae).

Bonatelli IA, Carstens BC, Moraes EM.

PLoS One. 2015 Nov 11;10(11):e0142602. doi: 10.1371/journal.pone.0142602. eCollection 2015.

22.

Posterior predictive checks of coalescent models: P2C2M, an R package.

Gruenstaeudl M, Reid NM, Wheeler GL, Carstens BC.

Mol Ecol Resour. 2016 Jan;16(1):193-205. doi: 10.1111/1755-0998.12435. Epub 2015 Jun 15.

PMID:
26032939
23.

The evolution of phylogeographic data sets.

Garrick RC, Bonatelli IA, Hyseni C, Morales A, Pelletier TA, Perez MF, Rice E, Satler JD, Symula RE, Thomé MT, Carstens BC.

Mol Ecol. 2015 Mar;24(6):1164-71. doi: 10.1111/mec.13108. Epub 2015 Mar 9.

PMID:
25678037
24.

Historical Species Distribution Models Predict Species Limits in Western Plethodon Salamanders.

Pelletier TA, Crisafulli C, Wagner S, Zellmer AJ, Carstens BC.

Syst Biol. 2015 Nov;64(6):909-25. doi: 10.1093/sysbio/syu090. Epub 2014 Nov 19.

PMID:
25414176
25.

Climate refugia: joint inference from fossil records, species distribution models and phylogeography.

Gavin DG, Fitzpatrick MC, Gugger PF, Heath KD, Rodríguez-Sánchez F, Dobrowski SZ, Hampe A, Hu FS, Ashcroft MB, Bartlein PJ, Blois JL, Carstens BC, Davis EB, de Lafontaine G, Edwards ME, Fernandez M, Henne PD, Herring EM, Holden ZA, Kong WS, Liu J, Magri D, Matzke NJ, McGlone MS, Saltré F, Stigall AL, Tsai YH, Williams JW.

New Phytol. 2014 Oct;204(1):37-54. doi: 10.1111/nph.12929. Epub 2014 Jul 16. Review.

26.

Sampling locality is more detectable than taxonomy or ecology in the gut microbiota of the brood-parasitic Brown-headed Cowbird (Molothrus ater).

Hird SM, Carstens BC, Cardiff SW, Dittmann DL, Brumfield RT.

PeerJ. 2014 Mar 20;2:e321. doi: 10.7717/peerj.321. eCollection 2014.

27.

Model choice for phylogeographic inference using a large set of models.

Pelletier TA, Carstens BC.

Mol Ecol. 2014 Jun;23(12):3028-43. doi: 10.1111/mec.12722. Epub 2014 Apr 25.

PMID:
24650161
28.

Poor fit to the multispecies coalescent is widely detectable in empirical data.

Reid NM, Hird SM, Brown JM, Pelletier TA, McVay JD, Satler JD, Carstens BC.

Syst Biol. 2014 May;63(3):322-33. doi: 10.1093/sysbio/syt057. Epub 2013 Aug 28.

PMID:
23985785
29.

How to fail at species delimitation.

Carstens BC, Pelletier TA, Reid NM, Satler JD.

Mol Ecol. 2013 Sep;22(17):4369-83. doi: 10.1111/mec.12413. Epub 2013 Jul 16. Review.

PMID:
23855767
30.

Model selection as a tool for phylogeographic inference: an example from the willow Salix melanopsis.

Carstens BC, Brennan RS, Chua V, Duffie CV, Harvey MG, Koch RA, McMahan CD, Nelson BJ, Newman CE, Satler JD, Seeholzer G, Posbic K, Tank DC, Sullivan J.

Mol Ecol. 2013 Aug;22(15):4014-28. doi: 10.1111/mec.12347. Epub 2013 Jul 13.

PMID:
23848064
31.

Multilocus species delimitation in a complex of morphologically conserved trapdoor spiders (mygalomorphae, antrodiaetidae, aliatypus).

Satler JD, Carstens BC, Hedin M.

Syst Biol. 2013 Nov;62(6):805-23. doi: 10.1093/sysbio/syt041. Epub 2013 Jun 13.

PMID:
23771888
32.

A road map for molecular ecology.

Andrew RL, Bernatchez L, Bonin A, Buerkle CA, Carstens BC, Emerson BC, Garant D, Giraud T, Kane NC, Rogers SM, Slate J, Smith H, Sork VL, Stone GN, Vines TH, Waits L, Widmer A, Rieseberg LH.

Mol Ecol. 2013 May;22(10):2605-26. doi: 10.1111/mec.12319. Review.

PMID:
23611646
33.
34.

Deep phylogeographic structure and environmental differentiation in the carnivorous plant Sarracenia alata.

Zellmer AJ, Hanes MM, Hird SM, Carstens BC.

Syst Biol. 2012 Oct;61(5):763-77. doi: 10.1093/sysbio/sys048. Epub 2012 May 3.

PMID:
22556200
35.

Applications of next-generation sequencing to phylogeography and phylogenetics.

McCormack JE, Hird SM, Zellmer AJ, Carstens BC, Brumfield RT.

Mol Phylogenet Evol. 2013 Feb;66(2):526-38. doi: 10.1016/j.ympev.2011.12.007. Epub 2011 Dec 14. Review.

PMID:
22197804
36.

PRGmatic: an efficient pipeline for collating genome-enriched second-generation sequencing data using a 'provisional-reference genome'.

Hird SM, Brumfield RT, Carstens BC.

Mol Ecol Resour. 2011 Jul;11(4):743-8. doi: 10.1111/j.1755-0998.2011.03005.x. Epub 2011 Mar 24.

PMID:
21676202
37.

SpedeSTEM: a rapid and accurate method for species delimitation.

Ence DD, Carstens BC.

Mol Ecol Resour. 2011 May;11(3):473-80. doi: 10.1111/j.1755-0998.2010.02947.x. Epub 2010 Dec 2.

PMID:
21481205
38.

The microbial Phyllogeography of the carnivorous plant Sarracenia alata.

Koopman MM, Carstens BC.

Microb Ecol. 2011 May;61(4):750-8. doi: 10.1007/s00248-011-9832-9. Epub 2011 Mar 24.

PMID:
21431933
39.

Navigating the unknown: model selection in phylogeography. Models of population structure: tools for thinkers.

Carstens BC, Knowles LL.

Mol Ecol. 2010 Nov;19(21):4581-2. doi: 10.1111/j.1365-294X.2010.04851.x.

40.

Species delimitation using a combined coalescent and information-theoretic approach: an example from North American Myotis bats.

Carstens BC, Dewey TA.

Syst Biol. 2010 Jul;59(4):400-14. doi: 10.1093/sysbio/syq024. Epub 2010 May 24.

41.

The carnivorous pale pitcher plant harbors diverse, distinct, and time-dependent bacterial communities.

Koopman MM, Fuselier DM, Hird S, Carstens BC.

Appl Environ Microbiol. 2010 Mar;76(6):1851-60. doi: 10.1128/AEM.02440-09. Epub 2010 Jan 22.

42.

Permanent Genetic Resources added to Molecular Ecology Resources Database 1 May 2009-31 July 2009.

Molecular Ecology Resources Primer Development Consortium, Almany GR, DE Arruda MP, Arthofer W, Atallah ZK, Beissinger SR, Berumen ML, Bogdanowicz SM, Brown SD, Bruford MW, Burdine C, Busch JW, Campbell NR, Carey D, Carstens BC, Chu KH, Cubeta MA, Cuda JP, Cui Z, Datnoff LE, Dávila JA, Davis ES, Davis RM, Diekmann OE, Eizirik E, Fargallo JA, Fernandes F, Fukuda H, Gale LR, Gallagher E, Gao Y, Girard P, Godhe A, Gonçalves EC, Gouveia L, Grajczyk AM, Grose MJ, Gu Z, Halldén C, Härnström K, Hemmingsen AH, Holmes G, Huang CH, Huang CC, Hudman SP, Jones GP, Kanetis L, Karunasagar I, Karunasagar I, Keyghobadi N, Klosterman SJ, Klug PE, Koch J, Koopman MM, Köppler K, Koshimizu E, Krumböck S, Kubisiak T, Landis JB, Lasta ML, Lee CY, Li Q, Li SH, Lin RC, Liu M, Liu N, Liu WC, Liu Y, Loiseau A, Luan W, Maruthachalam KK, McCormick HM, Mellick R, Monnahan PJ, Morielle-Versute E, Murray TE, Narum SR, Neufeld K, De Nova PJ, Ojiambo PS, Okamoto N, Othman AS, Overholt WA, Pardini R, Paterson IG, Patty OA, Paxton RJ, Planes S, Porter C, Pratchett MS, Püttker T, Rasic G, Rasool B, Rey O, Riegler M, Riehl C, Roberts JM, Roberts PD, Rochel E, Roe KJ, Rossetto M, Ruzzante DE, Sakamoto T, Saravanan V, Sarturi CR, Schmidt A, Schneider MP, Schuler H, Serb JM, Serrão ET, Shi Y, Silva A, Sin YW, Sommer S, Stauffer C, Strüssmann CA, Subbarao KV, Syms C, Tan F, Tejedor ED, Thorrold SR, Trigiano RN, Trucco MI, Tsuchiya-Jerep MT, Vergara P, Van De Vliet MS, Wadl PA, Wang A, Wang H, Wang RX, Wang X, Wang Y, Weeks AR, Wei F, Werner WJ, Wiley EO, Williams DA, Wilkins RJ, Wisely SM, With KA, Wu D, Yao CT, Yau C, Yeap BK, Zhai BP, Zhan X, Zhang GY, Zhang SY, Zhao R, Zhu L.

Mol Ecol Resour. 2009 Nov;9(6):1460-6. doi: 10.1111/j.1755-0998.2009.02759.x. Epub 2009 Sep 29.

PMID:
21564933
43.

An information-theoretical approach to phylogeography.

Carstens BC, Stoute HN, Reid NM.

Mol Ecol. 2009 Oct;18(20):4270-82. doi: 10.1111/j.1365-294X.2009.04327.x. Epub 2009 Sep 18. Erratum in: Mol Ecol. 2010 Feb;19(3):620.

PMID:
19765225
44.

Phylogeography's past, present, and future: 10 years after Avise, 2000.

Hickerson MJ, Carstens BC, Cavender-Bares J, Crandall KA, Graham CH, Johnson JB, Rissler L, Victoriano PF, Yoder AD.

Mol Phylogenet Evol. 2010 Jan;54(1):291-301. doi: 10.1016/j.ympev.2009.09.016. Epub 2009 Sep 13. Review.

PMID:
19755165
45.

X chromosome inactivation and Xist evolution in a rodent lacking LINE-1 activity.

Cantrell MA, Carstens BC, Wichman HA.

PLoS One. 2009 Jul 15;4(7):e6252. doi: 10.1371/journal.pone.0006252.

46.

STEM: species tree estimation using maximum likelihood for gene trees under coalescence.

Kubatko LS, Carstens BC, Knowles LL.

Bioinformatics. 2009 Apr 1;25(7):971-3. doi: 10.1093/bioinformatics/btp079. Epub 2009 Feb 10.

PMID:
19211573
47.

Does gene flow destroy phylogenetic signal? The performance of three methods for estimating species phylogenies in the presence of gene flow.

Eckert AJ, Carstens BC.

Mol Phylogenet Evol. 2008 Dec;49(3):832-42. doi: 10.1016/j.ympev.2008.09.008. Epub 2008 Sep 21.

PMID:
18845264
48.

Delimiting species without monophyletic gene trees.

Knowles LL, Carstens BC.

Syst Biol. 2007 Dec;56(6):887-95.

PMID:
18027282
49.

Integrating coalescent and ecological niche modeling in comparative phylogeography.

Carstens BC, Richards CL.

Evolution. 2007 Jun;61(6):1439-54.

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