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Items: 9

1.

De novo-designed translation-repressing riboregulators for multi-input cellular logic.

Kim J, Zhou Y, Carlson PD, Teichmann M, Chaudhary S, Simmel FC, Silver PA, Collins JJ, Lucks JB, Yin P, Green AA.

Nat Chem Biol. 2019 Dec;15(12):1173-1182. doi: 10.1038/s41589-019-0388-1. Epub 2019 Nov 4.

PMID:
31686032
2.

A ligand-gated strand displacement mechanism for ZTP riboswitch transcription control.

Strobel EJ, Cheng L, Berman KE, Carlson PD, Lucks JB.

Nat Chem Biol. 2019 Nov;15(11):1067-1076. doi: 10.1038/s41589-019-0382-7. Epub 2019 Oct 21.

PMID:
31636437
3.

Computational design of three-dimensional RNA structure and function.

Yesselman JD, Eiler D, Carlson ED, Gotrik MR, d'Aquino AE, Ooms AN, Kladwang W, Carlson PD, Shi X, Costantino DA, Herschlag D, Lucks JB, Jewett MC, Kieft JS, Das R.

Nat Nanotechnol. 2019 Sep;14(9):866-873. doi: 10.1038/s41565-019-0517-8. Epub 2019 Aug 19.

PMID:
31427748
4.

Elements of RNA Design.

Carlson PD, Lucks JB.

Biochemistry. 2019 Mar 19;58(11):1457-1459. doi: 10.1021/acs.biochem.8b01129. Epub 2018 Nov 15. No abstract available.

PMID:
30433768
5.

SnapShot: RNA Structure Probing Technologies.

Carlson PD, Evans ME, Yu AM, Strobel EJ, Lucks JB.

Cell. 2018 Oct 4;175(2):600-600.e1. doi: 10.1016/j.cell.2018.09.024.

6.

Characterizing the Structure-Function Relationship of a Naturally Occurring RNA Thermometer.

Meyer S, Carlson PD, Lucks JB.

Biochemistry. 2017 Dec 26;56(51):6629-6638. doi: 10.1021/acs.biochem.7b01170. Epub 2017 Dec 14.

7.

Using in-cell SHAPE-Seq and simulations to probe structure-function design principles of RNA transcriptional regulators.

Takahashi MK, Watters KE, Gasper PM, Abbott TR, Carlson PD, Chen AA, Lucks JB.

RNA. 2016 Jun;22(6):920-33. doi: 10.1261/rna.054916.115. Epub 2016 Apr 21.

8.

Automated image analysis programs for the quantification of microvascular network characteristics.

Morin KT, Carlson PD, Tranquillo RT.

Methods. 2015 Aug;84:76-83. doi: 10.1016/j.ymeth.2015.03.014. Epub 2015 Apr 2. Review.

9.

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