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Pangenomics Analysis Reveals Diversification of Enzyme Families and Niche Specialization in Globally Abundant SAR202 Bacteria.

Saw JHW, Nunoura T, Hirai M, Takaki Y, Parsons R, Michelsen M, Longnecker K, Kujawinski EB, Stepanauskas R, Landry Z, Carlson CA, Giovannoni SJ.

mBio. 2020 Jan 7;11(1). pii: e02975-19. doi: 10.1128/mBio.02975-19.


Species-Specific Differences in the Microbiomes and Organic Exudates of Crustose Coralline Algae Influence Bacterioplankton Communities.

Quinlan ZA, Ritson-Williams R, Carroll BJ, Carlson CA, Nelson CE.

Front Microbiol. 2019 Nov 8;10:2397. doi: 10.3389/fmicb.2019.02397. eCollection 2019.


A Triplication of 6q24 and Meconium Pseudocyst: A Case Report.

Mooney M, Carlson CA, Riley C.

Neonatal Netw. 2019 Nov 1;38(6):329-335. doi: 10.1891/0730-0832.38.6.329.


Factors driving the seasonal and hourly variability of sea-spray aerosol number in the North Atlantic.

Saliba G, Chen CL, Lewis S, Russell LM, Rivellini LH, Lee AKY, Quinn PK, Bates TS, Haƫntjens N, Boss ES, Karp-Boss L, Baetge N, Carlson CA, Behrenfeld MJ.

Proc Natl Acad Sci U S A. 2019 Oct 8;116(41):20309-20314. doi: 10.1073/pnas.1907574116. Epub 2019 Sep 23.


Thoracic growth deficiency in childhood cancer survivors may cause overestimation of lung disease.

Dean T, McDonough JM, Josephson M, Ginsberg JP, Carlson CA, Fiorino EK, Goldfarb SB.

Pediatr Pulmonol. 2019 Oct;54(10):1602-1609. doi: 10.1002/ppul.24430. Epub 2019 Jul 3.


Lineup fairness: propitious heterogeneity and the diagnostic feature-detection hypothesis.

Carlson CA, Jones AR, Whittington JE, Lockamyeir RF, Carlson MA, Wooten AR.

Cogn Res Princ Implic. 2019 Jun 13;4(1):20. doi: 10.1186/s41235-019-0172-5. Erratum in: Cogn Res Princ Implic. 2019 Aug 9;4(1):30.


Regulation of Low and High Nucleic Acid Fluorescent Heterotrophic Prokaryote Subpopulations and Links to Viral-Induced Mortality Within Natural Prokaryote-Virus Communities.

Mojica KDA, Carlson CA, Behrenfeld MJ.

Microb Ecol. 2020 Jan;79(1):213-230. doi: 10.1007/s00248-019-01393-9. Epub 2019 Jun 3.


Diel population and functional synchrony of microbial communities on coral reefs.

Kelly LW, Nelson CE, Haas AF, Naliboff DS, Calhoun S, Carlson CA, Edwards RA, Fox MD, Hatay M, Johnson MD, Kelly ELA, Lim YW, Macherla S, Quinlan ZA, Silva GGZ, Vermeij MJA, Zgliczynski B, Sandin SA, Smith JE, Rohwer F.

Nat Commun. 2019 Apr 12;10(1):1691. doi: 10.1038/s41467-019-09419-z.


Elevated pCO2 alters marine heterotrophic bacterial community composition and metabolic potential in response to a pulse of phytoplankton organic matter.

James AK, Kelly LW, Nelson CE, Wilbanks EG, Carlson CA.

Environ Microbiol. 2019 Feb;21(2):541-556. doi: 10.1111/1462-2920.14484. Epub 2019 Jan 21.


Primer selection impacts specific population abundances but not community dynamics in a monthly time-series 16S rRNA gene amplicon analysis of coastal marine bacterioplankton.

Wear EK, Wilbanks EG, Nelson CE, Carlson CA.

Environ Microbiol. 2018 Aug;20(8):2709-2726. doi: 10.1111/1462-2920.14091. Epub 2018 Apr 6.


Ovarian tissue cryopreservation (OTC) in prepubertal girls and young women: an analysis of parents' and patients' decision-making.

Sullivan-Pyke CS, Carlson CA, Prewitt M, Gracia CR, Ginsberg JP.

J Assist Reprod Genet. 2018 Apr;35(4):593-600. doi: 10.1007/s10815-018-1123-7. Epub 2018 Feb 1.


Developing a Hospital-Wide Fertility Preservation Service for Pediatric and Young Adult Patients.

Carlson CA, Kolon TF, Mattei P, Hobbie W, Gracia CR, Ogle S, Ginsberg JP.

J Adolesc Health. 2017 Nov;61(5):571-576. doi: 10.1016/j.jadohealth.2017.07.008. Epub 2017 Sep 13.


Elevated pCO2 enhances bacterioplankton removal of organic carbon.

James AK, Passow U, Brzezinski MA, Parsons RJ, Trapani JN, Carlson CA.

PLoS One. 2017 Mar 3;12(3):e0173145. doi: 10.1371/journal.pone.0173145. eCollection 2017.


Estimates of Abundance and Trend of Chilean Blue Whales off Isla de ChiloƩ, Chile.

Galletti Vernazzani B, Jackson JA, Cabrera E, Carlson CA, Brownell RL Jr.

PLoS One. 2017 Jan 12;12(1):e0168646. doi: 10.1371/journal.pone.0168646. eCollection 2017.


Analysis of semen parameters in a young cohort of cancer patients.

DiNofia AM, Wang X, Yannekis G, Ogle S, Hobbie WL, Carlson CA, Ginsberg JP.

Pediatr Blood Cancer. 2017 Feb;64(2):381-386. doi: 10.1002/pbc.26221. Epub 2016 Sep 13.


Changes in Ocean Heat, Carbon Content, and Ventilation: A Review of the First Decade of GO-SHIP Global Repeat Hydrography.

Talley LD, Feely RA, Sloyan BM, Wanninkhof R, Baringer MO, Bullister JL, Carlson CA, Doney SC, Fine RA, Firing E, Gruber N, Hansell DA, Ishii M, Johnson GC, Katsumata K, Key RM, Kramp M, Langdon C, Macdonald AM, Mathis JT, McDonagh EL, Mecking S, Millero FJ, Mordy CW, Nakano T, Sabine CL, Smethie WM, Swift JH, Tanhua T, Thurnherr AM, Warner MJ, Zhang JZ.

Ann Rev Mar Sci. 2016;8:185-215. doi: 10.1146/annurev-marine-052915-100829. Epub 2015 Oct 20. Review.


Local genomic adaptation of coral reef-associated microbiomes to gradients of natural variability and anthropogenic stressors.

Kelly LW, Williams GJ, Barott KL, Carlson CA, Dinsdale EA, Edwards RA, Haas AF, Haynes M, Lim YW, McDole T, Nelson CE, Sala E, Sandin SA, Smith JE, Vermeij MJ, Youle M, Rohwer F.

Proc Natl Acad Sci U S A. 2014 Jul 15;111(28):10227-32. doi: 10.1073/pnas.1403319111. Epub 2014 Jun 30.


Testicular tissue cryopreservation in prepubertal male children: an analysis of parental decision-making.

Ginsberg JP, Li Y, Carlson CA, Gracia CR, Hobbie WL, Miller VA, Mulhall J, Shnorhavorian M, Brinster RL, Kolon TF.

Pediatr Blood Cancer. 2014 Sep;61(9):1673-8. doi: 10.1002/pbc.25078. Epub 2014 Apr 29.


Community differentiation and population enrichment of Sargasso Sea bacterioplankton in the euphotic zone of a mesoscale mode-water eddy.

Nelson CE, Carlson CA, Ewart CS, Halewood ER.

Environ Microbiol. 2014 Mar;16(3):871-87. doi: 10.1111/1462-2920.12241. Epub 2013 Sep 12.


Marine bacterioplankton community turnover within seasonally hypoxic waters of a subtropical sound: Devil's Hole, Bermuda.

Parsons RJ, Nelson CE, Carlson CA, Denman CC, Andersson AJ, Kledzik AL, Vergin KL, McNally SP, Treusch AH, Giovannoni SJ.

Environ Microbiol. 2015 Oct;17(10):3481-99. doi: 10.1111/1462-2920.12445. Epub 2014 Apr 18.


Influence of coral and algal exudates on microbially mediated reef metabolism.

Haas AF, Nelson CE, Rohwer F, Wegley-Kelly L, Quistad SD, Carlson CA, Leichter JJ, Hatay M, Smith JE.

PeerJ. 2013 Jul 16;1:e108. doi: 10.7717/peerj.108. Print 2013.


Coral and macroalgal exudates vary in neutral sugar composition and differentially enrich reef bacterioplankton lineages.

Nelson CE, Goldberg SJ, Wegley Kelly L, Haas AF, Smith JE, Rohwer F, Carlson CA.

ISME J. 2013 May;7(5):962-79. doi: 10.1038/ismej.2012.161. Epub 2013 Jan 10.


Tracking differential incorporation of dissolved organic carbon types among diverse lineages of Sargasso Sea bacterioplankton.

Nelson CE, Carlson CA.

Environ Microbiol. 2012 Jun;14(6):1500-16. doi: 10.1111/j.1462-2920.2012.02738.x. Epub 2012 Apr 17.


Ovarian tissue cryopreservation for fertility preservation in cancer patients: successful establishment and feasibility of a multidisciplinary collaboration.

Gracia CR, Chang J, Kondapalli L, Prewitt M, Carlson CA, Mattei P, Jeffers S, Ginsberg JP.

J Assist Reprod Genet. 2012 Jun;29(6):495-502. doi: 10.1007/s10815-012-9753-7. Epub 2012 Apr 1.


Basin-scale patterns in the abundance of SAR11 subclades, marine Actinobacteria (OM1), members of the Roseobacter clade and OCS116 in the South Atlantic.

Morris RM, Frazar CD, Carlson CA.

Environ Microbiol. 2012 May;14(5):1133-44. doi: 10.1111/j.1462-2920.2011.02694.x. Epub 2012 Jan 9.


Effects of coral reef benthic primary producers on dissolved organic carbon and microbial activity.

Haas AF, Nelson CE, Wegley Kelly L, Carlson CA, Rohwer F, Leichter JJ, Wyatt A, Smith JE.

PLoS One. 2011;6(11):e27973. doi: 10.1371/journal.pone.0027973. Epub 2011 Nov 18.


Decoding cell lineage from acquired mutations using arbitrary deep sequencing.

Carlson CA, Kas A, Kirkwood R, Hays LE, Preston BD, Salipante SJ, Horwitz MS.

Nat Methods. 2011 Nov 27;9(1):78-80. doi: 10.1038/nmeth.1781.


Searching for the sequential line-up advantage: a distinctiveness explanation.

Carlson CA, Gronlund SD.

Memory. 2011 Nov;19(8):916-29. doi: 10.1080/09658211.2011.613846. Epub 2011 Oct 31.


Phytoplankton distribution patterns in the northwestern Sargasso Sea revealed by small subunit rRNA genes from plastids.

Treusch AH, Demir-Hilton E, Vergin KL, Worden AZ, Carlson CA, Donatz MG, Burton RM, Giovannoni SJ.

ISME J. 2012 Mar;6(3):481-92. doi: 10.1038/ismej.2011.117. Epub 2011 Sep 29.


An all-taxon microbial inventory of the Moorea coral reef ecosystem.

McCliment EA, Nelson CE, Carlson CA, Alldredge AL, Witting J, Amaral-Zettler LA.

ISME J. 2012 Feb;6(2):309-19. doi: 10.1038/ismej.2011.108. Epub 2011 Sep 8.


Ocean time-series reveals recurring seasonal patterns of virioplankton dynamics in the northwestern Sargasso Sea.

Parsons RJ, Breitbart M, Lomas MW, Carlson CA.

ISME J. 2012 Feb;6(2):273-84. doi: 10.1038/ismej.2011.101. Epub 2011 Aug 11.


Validity of self-reported colorectal cancer test use in different racial/ethnic groups.

Shokar NK, Vernon SW, Carlson CA.

Fam Pract. 2011 Dec;28(6):683-8. doi: 10.1093/fampra/cmr026. Epub 2011 May 12.


Stem injection of a systemic insecticide to control Uraba lugens on urban Lophostemon confertus trees.

Rolando CA, Gous SF, Berndt LA, Bulman LS, Carlson CA.

Pest Manag Sci. 2011 Sep;67(9):1062-8. doi: 10.1002/ps.2146. Epub 2011 Mar 24.


Depleted dissolved organic carbon and distinct bacterial communities in the water column of a rapid-flushing coral reef ecosystem.

Nelson CE, Alldredge AL, McCliment EA, Amaral-Zettler LA, Carlson CA.

ISME J. 2011 Aug;5(8):1374-87. doi: 10.1038/ismej.2011.12. Epub 2011 Mar 10.


Prevalence of advanced bone age in a cohort of patients who received cis-retinoic acid for high-risk neuroblastoma.

Hobbie WL, Mostoufi SM, Carlson CA, Gruccio D, Ginsberg JP.

Pediatr Blood Cancer. 2011 Mar;56(3):474-6. doi: 10.1002/pbc.22839. Erratum in: Pediatr Blood Cancer. 2013 Jul;60(7):1244. Moab, Sogol Mostoufi [corrected to Mostoufi, Sogol Moab].


Self-reported health problems of young adults in clinical settings: survivors of childhood cancer and healthy controls.

Schwartz LA, Mao JJ, Derosa BW, Ginsberg JP, Hobbie WL, Carlson CA, Mougianis ID, Ogle SK, Kazak AE.

J Am Board Fam Med. 2010 May-Jun;23(3):306-14. doi: 10.3122/jabfm.2010.03.090215.


Informed decision making changes test preferences for colorectal cancer screening in a diverse population.

Shokar NK, Carlson CA, Weller SC.

Ann Fam Med. 2010 Mar-Apr;8(2):141-50. doi: 10.1370/afm.1054.


Unicellular cyanobacterial distributions broaden the oceanic N2 fixation domain.

Moisander PH, Beinart RA, Hewson I, White AE, Johnson KS, Carlson CA, Montoya JP, Zehr JP.

Science. 2010 Mar 19;327(5972):1512-4. doi: 10.1126/science.1185468. Epub 2010 Feb 25.


Exploring the sequential lineup advantage using WITNESS.

Goodsell CA, Gronlund SD, Carlson CA.

Law Hum Behav. 2010 Dec;34(6):445-59. doi: 10.1007/s10979-009-9215-7.


Prepubertal human spermatogonia and mouse gonocytes share conserved gene expression of germline stem cell regulatory molecules.

Wu X, Schmidt JA, Avarbock MR, Tobias JW, Carlson CA, Kolon TF, Ginsberg JP, Brinster RL.

Proc Natl Acad Sci U S A. 2009 Dec 22;106(51):21672-7. doi: 10.1073/pnas.0912432106. Epub 2009 Dec 14.


An experimental protocol for fertility preservation in prepubertal boys recently diagnosed with cancer: a report of acceptability and safety.

Ginsberg JP, Carlson CA, Lin K, Hobbie WL, Wigo E, Wu X, Brinster RL, Kolon TF.

Hum Reprod. 2010 Jan;25(1):37-41. doi: 10.1093/humrep/dep371. Epub 2009 Oct 27.


Robustness of the sequential lineup advantage.

Gronlund SD, Carlson CA, Dailey SB, Goodsell CA.

J Exp Psychol Appl. 2009 Jun;15(2):140-152. doi: 10.1037/a0015082.


Seasonality and vertical structure of microbial communities in an ocean gyre.

Treusch AH, Vergin KL, Finlay LA, Donatz MG, Burton RM, Carlson CA, Giovannoni SJ.

ISME J. 2009 Oct;3(10):1148-63. doi: 10.1038/ismej.2009.60. Epub 2009 Jun 4.


Seasonal dynamics of SAR11 populations in the euphotic and mesopelagic zones of the northwestern Sargasso Sea.

Carlson CA, Morris R, Parsons R, Treusch AH, Giovannoni SJ, Vergin K.

ISME J. 2009 Mar;3(3):283-95. doi: 10.1038/ismej.2008.117. Epub 2008 Dec 4.


Fabrication of optical tips from photonic crystal fibers.

Carlson CA, Woehl JC.

Rev Sci Instrum. 2008 Oct;79(10):103707. doi: 10.1063/1.3002427.


Factors associated with racial/ethnic differences in colorectal cancer screening.

Shokar NK, Carlson CA, Weller SC.

J Am Board Fam Med. 2008 Sep-Oct;21(5):414-26. doi: 10.3122/jabfm.2008.05.070266.


Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea.

Sowell SM, Wilhelm LJ, Norbeck AD, Lipton MS, Nicora CD, Barofsky DF, Carlson CA, Smith RD, Giovanonni SJ.

ISME J. 2009 Jan;3(1):93-105. doi: 10.1038/ismej.2008.83. Epub 2008 Sep 4.


Late effects in survivors of tandem peripheral blood stem cell transplant for high-risk neuroblastoma.

Hobbie WL, Moshang T, Carlson CA, Goldmuntz E, Sacks N, Goldfarb SB, Grupp SA, Ginsberg JP.

Pediatr Blood Cancer. 2008 Nov;51(5):679-83. doi: 10.1002/pbc.21683.


Lineup composition, suspect position, and the sequential lineup advantage.

Carlson CA, Gronlund SD, Clark SE.

J Exp Psychol Appl. 2008 Jun;14(2):118-128. doi: 10.1037/1076-898X.14.2.118.


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