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Color discrimination thresholds in a cichlid fish: Metriaclima benetos.

Escobar-Camacho D, Taylor MA, Cheney KL, Green NF, Marshall NJ, Carleton KL.

J Exp Biol. 2019 Aug 9. pii: jeb.201160. doi: 10.1242/jeb.201160. [Epub ahead of print]


Diurnal variation in opsin expression and common housekeeping genes necessitates comprehensive normalization methods for quantitative real-time PCR analyses.

Yourick MR, Sandkam BA, Gammerdinger WJ, Escobar-Camacho D, Nandamuri SP, Clark FE, Joyce B, Conte MA, Kocher TD, Carleton KL.

Mol Ecol Resour. 2019 Jul 20. doi: 10.1111/1755-0998.13062. [Epub ahead of print]


Vision using multiple distinct rod opsins in deep-sea fishes.

Musilova Z, Cortesi F, Matschiner M, Davies WIL, Patel JS, Stieb SM, de Busserolles F, Malmstrøm M, Tørresen OK, Brown CJ, Mountford JK, Hanel R, Stenkamp DL, Jakobsen KS, Carleton KL, Jentoft S, Marshall J, Salzburger W.

Science. 2019 May 10;364(6440):588-592. doi: 10.1126/science.aav4632.


Cardinalfishes (Apogonidae) show visual system adaptations typical of nocturnally and diurnally active fish.

Luehrmann M, Carleton KL, Cortesi F, Cheney KL, Marshall NJ.

Mol Ecol. 2019 Jun;28(12):3025-3041. doi: 10.1111/mec.15102. Epub 2019 Jun 11.


Chromosome-scale assemblies reveal the structural evolution of African cichlid genomes.

Conte MA, Joshi R, Moore EC, Nandamuri SP, Gammerdinger WJ, Roberts RB, Carleton KL, Lien S, Kocher TD.

Gigascience. 2019 Apr 1;8(4). pii: giz030. doi: 10.1093/gigascience/giz030.


Variable vision in variable environments: the visual system of an invasive cichlid (Cichla monoculus) in Lake Gatun, Panama.

Escobar-Camacho D, Pierotti MER, Ferenc V, Sharpe DMT, Ramos E, Martins C, Carleton KL.

J Exp Biol. 2019 Mar 18;222(Pt 6). pii: jeb188300. doi: 10.1242/jeb.188300.


Multiple trans QTL and one cis-regulatory deletion are associated with the differential expression of cone opsins in African cichlids.

Nandamuri SP, Conte MA, Carleton KL.

BMC Genomics. 2018 Dec 18;19(1):945. doi: 10.1186/s12864-018-5328-z.


Short-term colour vision plasticity on the reef: changes in opsin expression under varying light conditions differ between ecologically distinct fish species.

Luehrmann M, Stieb SM, Carleton KL, Pietzker A, Cheney KL, Marshall NJ.

J Exp Biol. 2018 Nov 16;221(Pt 22). pii: jeb175281. doi: 10.1242/jeb.175281.


Opsin Expression in the Central Nervous System of the Mantis Shrimp Neogonodactylus oerstedii.

Donohue MW, Carleton KL, Cronin TW.

Biol Bull. 2017 Aug;233(1):58-69. doi: 10.1086/694421. Epub 2017 Oct 25.


Adult plasticity in African cichlids: Rapid changes in opsin expression in response to environmental light differences.

Nandamuri SP, Yourick MR, Carleton KL.

Mol Ecol. 2017 Nov;26(21):6036-6052. doi: 10.1111/mec.14357. Epub 2017 Oct 9.


Behavioral color vision in a cichlid fish: Metriaclima benetos.

Escobar-Camacho D, Marshall J, Carleton KL.

J Exp Biol. 2017 Aug 15;220(Pt 16):2887-2899. doi: 10.1242/jeb.160473. Epub 2017 May 25.


Determination of the Genetic Architecture Underlying Short Wavelength Sensitivity in Lake Malawi Cichlids.

Nandamuri SP, Dalton BE, Carleton KL.

J Hered. 2017 Jun 1;108(4):379-390. doi: 10.1093/jhered/esx020.


Group Active Engagements Using Quantitative Modeling of Physiology Concepts in Large-Enrollment Biology Classes.

Carleton KL, Rietschel CH, Marbach-Ad G.

J Microbiol Biol Educ. 2016 Dec 2;17(3):487-489. doi: 10.1128/jmbe.v17i3.1193. eCollection 2016 Dec. No abstract available.


The Use of Group Activities in Introductory Biology Supports Learning Gains and Uniquely Benefits High-Achieving Students.

Marbach-Ad G, Rietschel CH, Saluja N, Carleton KL, Haag ES.

J Microbiol Biol Educ. 2016 Dec 2;17(3):360-369. doi: 10.1128/jmbe.v17i3.1071. eCollection 2016 Dec.


Why UV vision and red vision are important for damselfish (Pomacentridae): structural and expression variation in opsin genes.

Stieb SM, Cortesi F, Sueess L, Carleton KL, Salzburger W, Marshall NJ.

Mol Ecol. 2017 Mar;26(5):1323-1342. doi: 10.1111/mec.13968. Epub 2017 Jan 27.


The opsin genes of amazonian cichlids.

Escobar-Camacho D, Ramos E, Martins C, Carleton KL.

Mol Ecol. 2017 Mar;26(5):1343-1356. doi: 10.1111/mec.13957. Epub 2017 Jan 27.


Retinal specialization through spatially varying cell densities and opsin coexpression in cichlid fish.

Dalton BE, de Busserolles F, Marshall NJ, Carleton KL.

J Exp Biol. 2017 Jan 15;220(Pt 2):266-277. doi: 10.1242/jeb.149211. Epub 2016 Nov 3.


Depth-dependent plasticity in opsin gene expression varies between damselfish (Pomacentridae) species.

Stieb SM, Carleton KL, Cortesi F, Marshall NJ, Salzburger W.

Mol Ecol. 2016 Aug;25(15):3645-61. doi: 10.1111/mec.13712. Epub 2016 Jul 2.


Proximate and ultimate causes of variable visual sensitivities: Insights from cichlid fish radiations.

Carleton KL, Dalton BE, Escobar-Camacho D, Nandamuri SP.

Genesis. 2016 Jun;54(6):299-325. doi: 10.1002/dvg.22940. Epub 2016 Apr 25. Review.


Sensory modalities in cichlid fish behavior.

Escobar-Camacho D, Carleton KL.

Curr Opin Behav Sci. 2015 Dec 1;6:115-124.


Multiple Genetic Mechanisms Contribute to Visual Sensitivity Variation in the Labridae.

Phillips GA, Carleton KL, Marshall NJ.

Mol Biol Evol. 2016 Jan;33(1):201-15. doi: 10.1093/molbev/msv213. Epub 2015 Oct 12.


Variable light environments induce plastic spectral tuning by regional opsin coexpression in the African cichlid fish, Metriaclima zebra.

Dalton BE, Lu J, Leips J, Cronin TW, Carleton KL.

Mol Ecol. 2015 Aug;24(16):4193-204. doi: 10.1111/mec.13312. Epub 2015 Aug 6.


Colour vision in marine organisms.

Marshall J, Carleton KL, Cronin T.

Curr Opin Neurobiol. 2015 Oct;34:86-94. doi: 10.1016/j.conb.2015.02.002. Epub 2015 Mar 2. Review.


Ancestral duplications and highly dynamic opsin gene evolution in percomorph fishes.

Cortesi F, Musilová Z, Stieb SM, Hart NS, Siebeck UE, Malmstrøm M, Tørresen OK, Jentoft S, Cheney KL, Marshall NJ, Carleton KL, Salzburger W.

Proc Natl Acad Sci U S A. 2015 Feb 3;112(5):1493-8. doi: 10.1073/pnas.1417803112. Epub 2014 Dec 29.


Spectral tuning by opsin coexpression in retinal regions that view different parts of the visual field.

Dalton BE, Loew ER, Cronin TW, Carleton KL.

Proc Biol Sci. 2014 Dec 22;281(1797). pii: 20141980. doi: 10.1098/rspb.2014.1980.


The genomic substrate for adaptive radiation in African cichlid fish.

Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alföldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleton KL, Conte MA, D'Cotta H, Eshel O, Gaffney L, Galibert F, Gante HF, Gnerre S, Greuter L, Guyon R, Haddad NS, Haerty W, Harris RM, Hofmann HA, Hourlier T, Hulata G, Jaffe DB, Lara M, Lee AP, MacCallum I, Mwaiko S, Nikaido M, Nishihara H, Ozouf-Costaz C, Penman DJ, Przybylski D, Rakotomanga M, Renn SCP, Ribeiro FJ, Ron M, Salzburger W, Sanchez-Pulido L, Santos ME, Searle S, Sharpe T, Swofford R, Tan FJ, Williams L, Young S, Yin S, Okada N, Kocher TD, Miska EA, Lander ES, Venkatesh B, Fernald RD, Meyer A, Ponting CP, Streelman JT, Lindblad-Toh K, Seehausen O, Di Palma F.

Nature. 2014 Sep 18;513(7518):375-381. doi: 10.1038/nature13726. Epub 2014 Sep 3.


Interspecific variation in Rx1 expression controls opsin expression and causes visual system diversity in African cichlid fishes.

Schulte JE, O'Brien CS, Conte MA, O'Quin KE, Carleton KL.

Mol Biol Evol. 2014 Sep;31(9):2297-308. doi: 10.1093/molbev/msu172. Epub 2014 May 24.


Evolution of cichlid vision via trans-regulatory divergence.

O'Quin KE, Schulte JE, Patel Z, Kahn N, Naseer Z, Wang H, Conte MA, Carleton KL.

BMC Evol Biol. 2012 Dec 26;12:251. doi: 10.1186/1471-2148-12-251.


Opsin evolution in damselfish: convergence, reversal, and parallel evolution across tuning sites.

Hofmann CM, Marshall NJ, Abdilleh K, Patel Z, Siebeck UE, Carleton KL.

J Mol Evol. 2012 Oct;75(3-4):79-91. doi: 10.1007/s00239-012-9525-0. Epub 2012 Oct 19.


Identification of amino acid residues responsible for the selectivity of tadalafil binding to two closely related phosphodiesterases, PDE5 and PDE6.

Cahill KB, Quade JH, Carleton KL, Cote RH.

J Biol Chem. 2012 Nov 30;287(49):41406-16. doi: 10.1074/jbc.M112.389189. Epub 2012 Oct 2.


An evaluation of the role of sensory drive in the evolution of lake Malawi cichlid fishes.

Smith AR, van Staaden MJ, Carleton KL.

Int J Evol Biol. 2012;2012:647420. doi: 10.1155/2012/647420. Epub 2012 Jun 21.


Limited variation in visual sensitivity among bowerbird species suggests that there is no link between spectral tuning and variation in display colouration.

Coyle BJ, Hart NS, Carleton KL, Borgia G.

J Exp Biol. 2012 Apr 1;215(Pt 7):1090-105. doi: 10.1242/jeb.062224.


Quantification of transcript levels with quantitative RT-PCR.

Carleton KL.

Methods Mol Biol. 2011;772:279-95. doi: 10.1007/978-1-61779-228-1_17.


Relative LWS cone opsin expression determines optomotor thresholds in Malawi cichlid fish.

Smith AR, Ma K, Soares D, Carleton KL.

Genes Brain Behav. 2012 Mar;11(2):185-92. doi: 10.1111/j.1601-183X.2011.00739.x. Epub 2011 Nov 17.


Divergence in cis-regulatory sequences surrounding the opsin gene arrays of African cichlid fishes.

O'Quin KE, Smith D, Naseer Z, Schulte J, Engel SD, Loh YH, Streelman JT, Boore JL, Carleton KL.

BMC Evol Biol. 2011 May 9;11:120. doi: 10.1186/1471-2148-11-120.


Sea urchin tube feet are photosensory organs that express a rhabdomeric-like opsin and PAX6.

Lesser MP, Carleton KL, Böttger SA, Barry TM, Walker CW.

Proc Biol Sci. 2011 Nov 22;278(1723):3371-9. doi: 10.1098/rspb.2011.0336. Epub 2011 Mar 30.


New evidence for the role of heterochrony in the repeated evolution of cichlid opsin expression.

O'Quin KE, Smith AR, Sharma A, Carleton KL.

Evol Dev. 2011 Mar-Apr;13(2):193-203. doi: 10.1111/j.1525-142X.2011.00469.x.


Intraspecific cone opsin expression variation in the cichlids of Lake Malawi.

Smith AR, D'Annunzio L, Smith AE, Sharma A, Hofmann CM, Marshall NJ, Carleton KL.

Mol Ecol. 2011 Jan;20(2):299-310. doi: 10.1111/j.1365-294X.2010.04935.x. Epub 2010 Nov 19.


Parallel evolution of opsin gene expression in African cichlid fishes.

O'Quin KE, Hofmann CM, Hofmann HA, Carleton KL.

Mol Biol Evol. 2010 Dec;27(12):2839-54. doi: 10.1093/molbev/msq171. Epub 2010 Jul 2.


The fish eye view: are cichlids conspicuous?

Dalton BE, Cronin TW, Marshall NJ, Carleton KL.

J Exp Biol. 2010 Jul 1;213(Pt 13):2243-55. doi: 10.1242/jeb.037671.


Allelic variation in Malawi cichlid opsins: a tale of two genera.

Smith AR, Carleton KL.

J Mol Evol. 2010 Jun;70(6):593-604. doi: 10.1007/s00239-010-9355-x. Epub 2010 Jun 4.


An EST resource for tilapia based on 17 normalized libraries and assembly of 116,899 sequence tags.

Lee BY, Howe AE, Conte MA, D'Cotta H, Pepey E, Baroiller JF, di Palma F, Carleton KL, Kocher TD.

BMC Genomics. 2010 Apr 30;11:278. doi: 10.1186/1471-2164-11-278.


Plasticity of opsin gene expression in cichlids from Lake Malawi.

Hofmann CM, O'Quin KE, Smith AR, Carleton KL.

Mol Ecol. 2010 May;19(10):2064-74. doi: 10.1111/j.1365-294X.2010.04621.x. Epub 2010 Mar 30.


Genetic basis of differential opsin gene expression in cichlid fishes.

Carleton KL, Hofmann CM, Klisz C, Patel Z, Chircus LM, Simenauer LH, Soodoo N, Albertson RC, Ser JR.

J Evol Biol. 2010 Apr;23(4):840-53. doi: 10.1111/j.1420-9101.2010.01954.x. Epub 2010 Mar 1.


The eyes have it: regulatory and structural changes both underlie cichlid visual pigment diversity.

Hofmann CM, O'Quin KE, Marshall NJ, Cronin TW, Seehausen O, Carleton KL.

PLoS Biol. 2009 Dec;7(12):e1000266. doi: 10.1371/journal.pbio.1000266. Epub 2009 Dec 22.


The relationship between lens transmission and opsin gene expression in cichlids from Lake Malawi.

Hofmann CM, O'Quin KE, Justin Marshall N, Carleton KL.

Vision Res. 2010 Feb 8;50(3):357-63. doi: 10.1016/j.visres.2009.12.004. Epub 2009 Dec 11.


Gene duplication and differential gene expression play an important role in the diversification of visual pigments in fish.

Hofmann CM, Carleton KL.

Integr Comp Biol. 2009 Dec;49(6):630-43. doi: 10.1093/icb/icp079. Epub 2009 Aug 3.


Speciation through sensory drive in cichlid fish.

Seehausen O, Terai Y, Magalhaes IS, Carleton KL, Mrosso HD, Miyagi R, van der Sluijs I, Schneider MV, Maan ME, Tachida H, Imai H, Okada N.

Nature. 2008 Oct 2;455(7213):620-6. doi: 10.1038/nature07285.


Visual sensitivities tuned by heterochronic shifts in opsin gene expression.

Carleton KL, Spady TC, Streelman JT, Kidd MR, McFarland WN, Loew ER.

BMC Biol. 2008 May 23;6:22. doi: 10.1186/1741-7007-6-22.


Evolution of the cichlid visual palette through ontogenetic subfunctionalization of the opsin gene arrays.

Spady TC, Parry JW, Robinson PR, Hunt DM, Bowmaker JK, Carleton KL.

Mol Biol Evol. 2006 Aug;23(8):1538-47. Epub 2006 May 23.


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