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Items: 11

1.

Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection.

Song H, Giorgi EE, Ganusov VV, Cai F, Athreya G, Yoon H, Carja O, Hora B, Hraber P, Romero-Severson E, Jiang C, Li X, Wang S, Li H, Salazar-Gonzalez JF, Salazar MG, Goonetilleke N, Keele BF, Montefiori DC, Cohen MS, Shaw GM, Hahn BH, McMichael AJ, Haynes BF, Korber B, Bhattacharya T, Gao F.

Nat Commun. 2018 May 15;9(1):1928. doi: 10.1038/s41467-018-04217-5.

2.

Worldwide patterns of human epigenetic variation.

Carja O, MacIsaac JL, Mah SM, Henn BM, Kobor MS, Feldman MW, Fraser HB.

Nat Ecol Evol. 2017 Oct;1(10):1577-1583. doi: 10.1038/s41559-017-0299-z. Epub 2017 Aug 28.

PMID:
29185505
3.

riboviz: analysis and visualization of ribosome profiling datasets.

Carja O, Xing T, Wallace EWJ, Plotkin JB, Shah P.

BMC Bioinformatics. 2017 Oct 25;18(1):461. doi: 10.1186/s12859-017-1873-8.

4.

Correction of 'An equilibrium for phenotypic variance in fluctuating environments owing to epigenetics'.

Carja O, Feldman MW.

J R Soc Interface. 2017 Aug;14(133). pii: 20170571. doi: 10.1098/rsif.2017.0571. No abstract available.

5.

The evolutionary advantage of heritable phenotypic heterogeneity.

Carja O, Plotkin JB.

Sci Rep. 2017 Jul 11;7(1):5090. doi: 10.1038/s41598-017-05214-2.

6.

Trends in DNA Methylation with Age Replicate Across Diverse Human Populations.

Gopalan S, Carja O, Fagny M, Patin E, Myrick JW, McEwen LM, Mah SM, Kobor MS, Froment A, Feldman MW, Quintana-Murci L, Henn BM.

Genetics. 2017 Jul;206(3):1659-1674. doi: 10.1534/genetics.116.195594. Epub 2017 May 22.

PMID:
28533441
7.

Evolution in changing environments: modifiers of mutation, recombination, and migration.

Carja O, Liberman U, Feldman MW.

Proc Natl Acad Sci U S A. 2014 Dec 16;111(50):17935-40. doi: 10.1073/pnas.1417664111. Epub 2014 Nov 26.

8.

The role of migration in the evolution of phenotypic switching.

Carja O, Furrow RE, Feldman MW.

Proc Biol Sci. 2014 Nov 7;281(1794):20141677. doi: 10.1098/rspb.2014.1677.

9.

The evolution of phenotypic switching in subdivided populations.

Carja O, Liberman U, Feldman MW.

Genetics. 2014 Apr;196(4):1185-97. doi: 10.1534/genetics.114.161364. Epub 2014 Feb 4.

10.

Evolution with stochastic fitnesses: a role for recombination.

Carja O, Liberman U, Feldman MW.

Theor Popul Biol. 2013 Jun;86:29-42. doi: 10.1016/j.tpb.2013.02.005. Epub 2013 Mar 18.

PMID:
23517905
11.

An equilibrium for phenotypic variance in fluctuating environments owing to epigenetics.

Carja O, Feldman MW.

J R Soc Interface. 2012 Apr 7;9(69):613-23. doi: 10.1098/rsif.2011.0390. Epub 2011 Aug 17. Erratum in: J R Soc Interface. 2017 Aug;14 (133):.

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