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Items: 10

1.

Receptor crosstalk improves concentration sensing of multiple ligands.

Carballo-Pacheco M, Desponds J, Gavrilchenko T, Mayer A, Prizak R, Reddy G, Nemenman I, Mora T.

Phys Rev E. 2019 Feb;99(2-1):022423. doi: 10.1103/PhysRevE.99.022423.

PMID:
30934315
2.

Growth-dependent drug susceptibility can prevent or enhance spatial expansion of a bacterial population.

Sinclair P, Carballo-Pacheco M, Allen RJ.

Phys Biol. 2019 Apr 23;16(4):046001. doi: 10.1088/1478-3975/ab131e.

PMID:
30909169
3.

Automated Markov state models for molecular dynamics simulations of aggregation and self-assembly.

Sengupta U, Carballo-Pacheco M, Strodel B.

J Chem Phys. 2019 Mar 21;150(11):115101. doi: 10.1063/1.5083915.

PMID:
30901988
4.

On the Applicability of Force Fields To Study the Aggregation of Amyloidogenic Peptides Using Molecular Dynamics Simulations.

Carballo-Pacheco M, Ismail AE, Strodel B.

J Chem Theory Comput. 2018 Nov 13;14(11):6063-6075. doi: 10.1021/acs.jctc.8b00579. Epub 2018 Oct 31.

PMID:
30336669
5.

Epigallocatechin-3-gallate preferentially induces aggregation of amyloidogenic immunoglobulin light chains.

Hora M, Carballo-Pacheco M, Weber B, Morris VK, Wittkopf A, Buchner J, Strodel B, Reif B.

Sci Rep. 2017 Jan 27;7:41515. doi: 10.1038/srep41515.

6.

Solid- and solution-state nuclear magnetic resonance spectroscopic studies on antibody light chain amyloid formation and interactions with epigallocatechin gallate.

Hora M, Carballo Pacheco M, Weber B, Buchner J, Strodel B, Reif B.

Amyloid. 2017 Mar;24(sup1):10. doi: 10.1080/13506129.2016.1269736. Epub 2016 Dec 26. No abstract available.

PMID:
28019720
7.

Comparison of force fields for Alzheimer's A β42: A case study for intrinsically disordered proteins.

Carballo-Pacheco M, Strodel B.

Protein Sci. 2017 Feb;26(2):174-185. doi: 10.1002/pro.3064. Epub 2016 Oct 26.

8.

Advances in the Simulation of Protein Aggregation at the Atomistic Scale.

Carballo-Pacheco M, Strodel B.

J Phys Chem B. 2016 Mar 31;120(12):2991-9. doi: 10.1021/acs.jpcb.6b00059. Epub 2016 Mar 21. Review.

PMID:
26965454
9.

Oligomer Formation of Toxic and Functional Amyloid Peptides Studied with Atomistic Simulations.

Carballo-Pacheco M, Ismail AE, Strodel B.

J Phys Chem B. 2015 Jul 30;119(30):9696-705. doi: 10.1021/acs.jpcb.5b04822. Epub 2015 Jul 16.

PMID:
26130191
10.

Extension of the FACTS Implicit Solvation Model to Membranes.

Carballo-Pacheco M, Vancea I, Strodel B.

J Chem Theory Comput. 2014 Aug 12;10(8):3163-76. doi: 10.1021/ct500084y. Epub 2014 Jun 11.

PMID:
26588287

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