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Items: 42

1.

The oak syngameon: more than the sum of its parts.

Cannon CH, Petit RJ.

New Phytol. 2019 Aug 4. doi: 10.1111/nph.16091. [Epub ahead of print]

PMID:
31378946
2.

Demography and destiny: The syngameon in hyperdiverse systems.

Cannon CH, Lerdau MT.

Proc Natl Acad Sci U S A. 2019 Apr 23;116(17):8105. doi: 10.1073/pnas.1902040116. Epub 2019 Apr 9. No abstract available.

PMID:
30967502
3.

Botanic gardens should lead the way to create a "Garden Earth" in the Anthropocene.

Cannon CH, Kua CS.

Plant Divers. 2017 Nov 24;39(6):331-337. doi: 10.1016/j.pld.2017.11.003. eCollection 2017 Dec. Review.

4.

Correction: Associated morphometric and geospatial differentiation among 98 species of stone oaks (Lithocarpus).

Chen X, Kohyama TS, Cannon CH.

PLoS One. 2018 Aug 14;13(8):e0202461. doi: 10.1371/journal.pone.0202461. eCollection 2018.

5.

Associated morphometric and geospatial differentiation among 98 species of stone oaks (Lithocarpus).

Chen X, Kohyama TS, Cannon CH.

PLoS One. 2018 Jun 26;13(6):e0199538. doi: 10.1371/journal.pone.0199538. eCollection 2018. Erratum in: PLoS One. 2018 Aug 14;13(8):e0202461.

6.

Gaining a global perspective on Fagaceae genomic diversification and adaptation.

Cannon CH, Brendel O, Deng M, Hipp AL, Kremer A, Kua CS, Plomion C, Romero-Severson J, Sork VL.

New Phytol. 2018 May;218(3):894-897. doi: 10.1111/nph.15101. No abstract available.

7.

Exploring the potential of gametic reconstruction of parental genotypes by F1 hybrids as a bridge for rapid introgression.

Cannon CH, Scher CL.

Genome. 2017 Sep;60(9):713-719. doi: 10.1139/gen-2016-0181. Epub 2017 Jul 21.

8.
9.

Pollinator sharing and gene flow among closely related sympatric dioecious fig taxa.

Wang G, Cannon CH, Chen J.

Proc Biol Sci. 2016 Apr 13;283(1828). pii: 20152963. doi: 10.1098/rspb.2015.2963.

10.

An assembly and alignment-free method of phylogeny reconstruction from next-generation sequencing data.

Fan H, Ives AR, Surget-Groba Y, Cannon CH.

BMC Genomics. 2015 Jul 14;16:522. doi: 10.1186/s12864-015-1647-5.

11.

Inference of Markovian properties of molecular sequences from NGS data and applications to comparative genomics.

Ren J, Song K, Deng M, Reinert G, Cannon CH, Sun F.

Bioinformatics. 2016 Apr 1;32(7):993-1000. doi: 10.1093/bioinformatics/btv395. Epub 2015 Jun 30.

12.

Variable mating behaviors and the maintenance of tropical biodiversity.

Cannon CH, Lerdau M.

Front Genet. 2015 May 19;6:183. doi: 10.3389/fgene.2015.00183. eCollection 2015.

13.

Deforestation and fragmentation of natural forests in the upper Changhua watershed, Hainan, China: implications for biodiversity conservation.

Zhai DL, Cannon CH, Dai ZC, Zhang CP, Xu JC.

Environ Monit Assess. 2015 Jan;187(1):4137. doi: 10.1007/s10661-014-4137-3. Epub 2014 Nov 22.

PMID:
25416130
14.

Historical distribution of Sundaland's Dipterocarp rainforests at Quaternary glacial maxima.

Raes N, Cannon CH, Hijmans RJ, Piessens T, Saw LG, van Welzen PC, Slik JW.

Proc Natl Acad Sci U S A. 2014 Nov 25;111(47):16790-5. doi: 10.1073/pnas.1403053111. Epub 2014 Nov 10.

15.

Protein domain analysis of genomic sequence data reveals regulation of LRR related domains in plant transpiration in Ficus.

Lang T, Yin K, Liu J, Cao K, Cannon CH, Du FK.

PLoS One. 2014 Sep 30;9(9):e108719. doi: 10.1371/journal.pone.0108719. eCollection 2014.

16.

How does conversion of natural tropical rainforest ecosystems affect soil bacterial and fungal communities in the Nile river watershed of Uganda?

Alele PO, Sheil D, Surget-Groba Y, Lingling S, Cannon CH.

PLoS One. 2014 Aug 12;9(8):e104818. doi: 10.1371/journal.pone.0104818. eCollection 2014.

17.

Borneo and Indochina are major evolutionary hotspots for Southeast Asian biodiversity.

de Bruyn M, Stelbrink B, Morley RJ, Hall R, Carvalho GR, Cannon CH, van den Bergh G, Meijaard E, Metcalfe I, Boitani L, Maiorano L, Shoup R, von Rintelen T.

Syst Biol. 2014 Nov;63(6):879-901. doi: 10.1093/sysbio/syu047. Epub 2014 Jul 28.

PMID:
25070971
18.

Footprints of divergent selection in natural populations of Castanopsis fargesii (Fagaceae).

Li C, Sun Y, Huang HW, Cannon CH.

Heredity (Edinb). 2014 Dec;113(6):533-41. doi: 10.1038/hdy.2014.58. Epub 2014 Jul 2.

19.

Pseudo-Sanger sequencing: massively parallel production of long and near error-free reads using NGS technology.

Ruan J, Jiang L, Chong Z, Gong Q, Li H, Li C, Tao Y, Zheng C, Zhai W, Turissini D, Cannon CH, Lu X, Wu CI.

BMC Genomics. 2013 Oct 17;14:711. doi: 10.1186/1471-2164-14-711.

20.

Molecular evolutionary analysis of the Alfin-like protein family in Arabidopsis lyrata, Arabidopsis thaliana, and Thellungiella halophila.

Song Y, Gao J, Yang F, Kua CS, Liu J, Cannon CH.

PLoS One. 2013 Jul 1;8(7):e66838. doi: 10.1371/journal.pone.0066838. Print 2013.

21.

Development of high-throughput SNP-based genotyping in Acacia auriculiformis x A. mangium hybrids using short-read transcriptome data.

Wong MM, Cannon CH, Wickneswari R.

BMC Genomics. 2012 Dec 24;13:726. doi: 10.1186/1471-2164-13-726.

22.

Reference-free comparative genomics of 174 chloroplasts.

Kua CS, Ruan J, Harting J, Ye CX, Helmus MR, Yu J, Cannon CH.

PLoS One. 2012;7(11):e48995. doi: 10.1371/journal.pone.0048995. Epub 2012 Nov 20.

23.

A curiosity moment for tropical biology?

Cannon CH.

Science. 2012 Oct 26;338(6106):467. doi: 10.1126/science.338.6106.467-a. No abstract available.

PMID:
23112309
24.

Averting biodiversity collapse in tropical forest protected areas.

Laurance WF, Useche DC, Rendeiro J, Kalka M, Bradshaw CJ, Sloan SP, Laurance SG, Campbell M, Abernethy K, Alvarez P, Arroyo-Rodriguez V, Ashton P, Benítez-Malvido J, Blom A, Bobo KS, Cannon CH, Cao M, Carroll R, Chapman C, Coates R, Cords M, Danielsen F, De Dijn B, Dinerstein E, Donnelly MA, Edwards D, Edwards F, Farwig N, Fashing P, Forget PM, Foster M, Gale G, Harris D, Harrison R, Hart J, Karpanty S, Kress WJ, Krishnaswamy J, Logsdon W, Lovett J, Magnusson W, Maisels F, Marshall AR, McClearn D, Mudappa D, Nielsen MR, Pearson R, Pitman N, van der Ploeg J, Plumptre A, Poulsen J, Quesada M, Rainey H, Robinson D, Roetgers C, Rovero F, Scatena F, Schulze C, Sheil D, Struhsaker T, Terborgh J, Thomas D, Timm R, Urbina-Cardona JN, Vasudevan K, Wright SJ, Arias-G JC, Arroyo L, Ashton M, Auzel P, Babaasa D, Babweteera F, Baker P, Banki O, Bass M, Bila-Isia I, Blake S, Brockelman W, Brokaw N, Brühl CA, Bunyavejchewin S, Chao JT, Chave J, Chellam R, Clark CJ, Clavijo J, Congdon R, Corlett R, Dattaraja HS, Dave C, Davies G, Beisiegel Bde M, da Silva Rde N, Di Fiore A, Diesmos A, Dirzo R, Doran-Sheehy D, Eaton M, Emmons L, Estrada A, Ewango C, Fedigan L, Feer F, Fruth B, Willis JG, Goodale U, Goodman S, Guix JC, Guthiga P, Haber W, Hamer K, Herbinger I, Hill J, Huang Z, Sun IF, Ickes K, Itoh A, Ivanauskas N, Jackes B, Janovec J, Janzen D, Jiangming M, Jin C, Jones T, Justiniano H, Kalko E, Kasangaki A, Killeen T, King HB, Klop E, Knott C, Koné I, Kudavidanage E, Ribeiro JL, Lattke J, Laval R, Lawton R, Leal M, Leighton M, Lentino M, Leonel C, Lindsell J, Ling-Ling L, Linsenmair KE, Losos E, Lugo A, Lwanga J, Mack AL, Martins M, McGraw WS, McNab R, Montag L, Thompson JM, Nabe-Nielsen J, Nakagawa M, Nepal S, Norconk M, Novotny V, O'Donnell S, Opiang M, Ouboter P, Parker K, Parthasarathy N, Pisciotta K, Prawiradilaga D, Pringle C, Rajathurai S, Reichard U, Reinartz G, Renton K, Reynolds G, Reynolds V, Riley E, Rödel MO, Rothman J, Round P, Sakai S, Sanaiotti T, Savini T, Schaab G, Seidensticker J, Siaka A, Silman MR, Smith TB, de Almeida SS, Sodhi N, Stanford C, Stewart K, Stokes E, Stoner KE, Sukumar R, Surbeck M, Tobler M, Tscharntke T, Turkalo A, Umapathy G, van Weerd M, Rivera JV, Venkataraman M, Venn L, Verea C, de Castilho CV, Waltert M, Wang B, Watts D, Weber W, West P, Whitacre D, Whitney K, Wilkie D, Williams S, Wright DD, Wright P, Xiankai L, Yonzon P, Zamzani F.

Nature. 2012 Sep 13;489(7415):290-4. doi: 10.1038/nature11318.

PMID:
22832582
25.

Exploiting sparseness in de novo genome assembly.

Ye C, Ma ZS, Cannon CH, Pop M, Yu DW.

BMC Bioinformatics. 2012 Apr 19;13 Suppl 6:S1. doi: 10.1186/1471-2105-13-S6-S1.

26.

Evidence for a trade-off strategy in stone oak (Lithocarpus) seeds between physical and chemical defense highlights fiber as an important antifeedant.

Chen X, Cannon CH, Conklin-Brittan NL.

PLoS One. 2012;7(3):e32890. doi: 10.1371/journal.pone.0032890. Epub 2012 Mar 22.

27.

Rubber and pulp plantations represent a double threat to Hainan's natural tropical forests.

Zhai DL, Cannon CH, Slik JW, Zhang CP, Dai ZC.

J Environ Manage. 2012 Apr 15;96(1):64-73. doi: 10.1016/j.jenvman.2011.10.011. Epub 2011 Dec 1.

PMID:
22208399
28.

Phylogeny and evolution of bracts and bracteoles in Tacca (Dioscoreaceae).

Zhang L, Li HT, Gao LM, Yang JB, Li DZ, Cannon CH, Chen J, Li QJ.

J Integr Plant Biol. 2011 Nov;53(11):901-11. doi: 10.1111/j.1744-7909.2011.01076.x. Epub 2011 Nov 1.

PMID:
21951914
29.

Soils on exposed Sunda shelf shaped biogeographic patterns in the equatorial forests of Southeast Asia.

Slik JW, Aiba S, Bastian M, Brearley FQ, Cannon CH, Eichhorn KA, Fredriksson G, Kartawinata K, Laumonier Y, Mansor A, Marjokorpi A, Meijaard E, Morley RJ, Nagamasu H, Nilus R, Nurtjahya E, Payne J, Permana A, Poulsen AD, Raes N, Riswan S, van Schaik CP, Sheil D, Sidiyasa K, Suzuki E, van Valkenburg JL, Webb CO, Wich S, Yoneda T, Zakaria R, Zweifel N.

Proc Natl Acad Sci U S A. 2011 Jul 26;108(30):12343-7. doi: 10.1073/pnas.1103353108. Epub 2011 Jul 11.

31.

Mass fruiting in Borneo: a missed opportunity.

Kettle CJ, Ghazoul J, Ashton PS, Cannon CH, Chong L, Diway B, Faridah E, Harrison R, Hector A, Hollingsworth P, Koh LP, Khoo E, Kitayama K, Kartawinata K, Marshall AJ, Maycock CR, Nanami S, Paoli G, Potts MD, Sheil D, Tan S, Tomoaki I, Webb C, Yamakura T, Burslem DF.

Science. 2010 Oct 29;330(6004):584. doi: 10.1126/science.330.6004.584-a. No abstract available.

PMID:
21030629
32.

Fire as a selective force in a Bornean tropical everwet forest.

Slik JW, Breman FC, Bernard C, van Beek M, Cannon CH, Eichhorn KA, Sidiyasa K.

Oecologia. 2010 Nov;164(3):841-9. doi: 10.1007/s00442-010-1764-4. Epub 2010 Sep 2.

PMID:
20811911
33.

Assembly free comparative genomics of short-read sequence data discovers the needles in the haystack.

Cannon CH, Kua CS, Zhang D, Harting JR.

Mol Ecol. 2010 Mar;19 Suppl 1:147-61. doi: 10.1111/j.1365-294X.2009.04484.x.

PMID:
20331777
34.

Communities contain closely related species during ecosystem disturbance.

Helmus MR, Keller WB, Paterson MJ, Yan ND, Cannon CH, Rusak JA.

Ecol Lett. 2010 Feb;13(2):162-74. doi: 10.1111/j.1461-0248.2009.01411.x. Epub 2009 Dec 8.

PMID:
20015255
35.

Tropical botanical gardens: at the in situ ecosystem management frontier.

Chen J, Cannon CH, Hu H.

Trends Plant Sci. 2009 Nov;14(11):584-9. doi: 10.1016/j.tplants.2009.08.010. Epub 2009 Sep 24.

PMID:
19781975
36.

The current refugial rainforests of Sundaland are unrepresentative of their biogeographic past and highly vulnerable to disturbance.

Cannon CH, Morley RJ, Bush AB.

Proc Natl Acad Sci U S A. 2009 Jul 7;106(27):11188-93. doi: 10.1073/pnas.0809865106. Epub 2009 Jun 19.

38.

Capturing genomic signatures of DNA sequence variation using a standard anonymous microarray platform.

Cannon CH, Kua CS, Lobenhofer EK, Hurban P.

Nucleic Acids Res. 2006;34(18):e121. Epub 2006 Sep 25.

39.

Conservation and divergence of plant microRNA genes.

Zhang B, Pan X, Cannon CH, Cobb GP, Anderson TA.

Plant J. 2006 Apr;46(2):243-59.

41.

Tree species diversity in commercially logged bornean rainforest

Cannon CH, Peart DR, Leighton M.

Science. 1998 Aug 28;281(5381):1366-8.

42.

Comparative locomotor ecology of gibbons and macaques: selection of canopy elements for crossing gaps.

Cannon CH, Leighton M.

Am J Phys Anthropol. 1994 Apr;93(4):505-24.

PMID:
8048471

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