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Is It First the Egg or the Shrimp? - Diversity and Variation in Microbial Communities Colonizing Broods of the Vent Shrimp Rimicaris exoculata During Embryonic Development.

Methou P, Hernández-Ávila I, Aube J, Cueff-Gauchard V, Gayet N, Amand L, Shillito B, Pradillon F, Cambon-Bonavita MA.

Front Microbiol. 2019 Apr 17;10:808. doi: 10.3389/fmicb.2019.00808. eCollection 2019.


Gill chamber and gut microbial communities of the hydrothermal shrimp Rimicaris chacei Williams and Rona 1986: A possible symbiosis.

Apremont V, Cambon-Bonavita MA, Cueff-Gauchard V, François D, Pradillon F, Corbari L, Zbinden M.

PLoS One. 2018 Nov 2;13(11):e0206084. doi: 10.1371/journal.pone.0206084. eCollection 2018.


A Nematode of the Mid-Atlantic Ridge Hydrothermal Vents Harbors a Possible Symbiotic Relationship.

Bellec L, Cambon-Bonavita MA, Cueff-Gauchard V, Durand L, Gayet N, Zeppilli D.

Front Microbiol. 2018 Sep 20;9:2246. doi: 10.3389/fmicb.2018.02246. eCollection 2018.


Highlighting of quorum sensing lux genes and their expression in the hydrothermal vent shrimp Rimicaris exoculata ectosymbiontic community. Possible use as biogeographic markers.

Le Bloa S, Durand L, Cueff-Gauchard V, Le Bars J, Taupin L, Marteau C, Bazire A, Cambon-Bonavita MA.

PLoS One. 2017 Mar 22;12(3):e0174338. doi: 10.1371/journal.pone.0174338. eCollection 2017.


Investigation of bacterial communities within the digestive organs of the hydrothermal vent shrimp Rimicaris exoculata provide insights into holobiont geographic clustering.

Cowart DA, Durand L, Cambon-Bonavita MA, Arnaud-Haond S.

PLoS One. 2017 Mar 15;12(3):e0172543. doi: 10.1371/journal.pone.0172543. eCollection 2017.


Development of an ecotoxicological protocol for the deep-sea fauna using the hydrothermal vent shrimp Rimicaris exoculata.

Auguste M, Mestre NC, Rocha TL, Cardoso C, Cueff-Gauchard V, Le Bloa S, Cambon-Bonavita MA, Shillito B, Zbinden M, Ravaux J, Bebianno MJ.

Aquat Toxicol. 2016 Jun;175:277-85. doi: 10.1016/j.aquatox.2016.03.024. Epub 2016 Mar 30.


Morphology of First Zoeal Stage of Four Genera of Alvinocaridid Shrimps from Hydrothermal Vents and Cold Seeps: Implications for Ecology, Larval Biology and Phylogeny.

Hernández-Ávila I, Cambon-Bonavita MA, Pradillon F.

PLoS One. 2015 Dec 28;10(12):e0144657. doi: 10.1371/journal.pone.0144657. eCollection 2015.


Biogeographical distribution of Rimicaris exoculata resident gut epibiont communities along the Mid-Atlantic Ridge hydrothermal vent sites.

Durand L, Roumagnac M, Cueff-Gauchard V, Jan C, Guri M, Tessier C, Haond M, Crassous P, Zbinden M, Arnaud-Haond S, Cambon-Bonavita MA.

FEMS Microbiol Ecol. 2015 Oct;91(10). pii: fiv101. doi: 10.1093/femsec/fiv101. Epub 2015 Aug 30.


Identification and characterization of carboxyl esterases of gill chamber-associated microbiota in the deep-sea shrimp Rimicaris exoculata by using functional metagenomics.

Alcaide M, Tchigvintsev A, Martínez-Martínez M, Popovic A, Reva ON, Lafraya Á, Bargiela R, Nechitaylo TY, Matesanz R, Cambon-Bonavita MA, Jebbar M, Yakimov MM, Savchenko A, Golyshina OV, Yakunin AF, Golyshin PN, Ferrer M; MAMBA Consortium.

Appl Environ Microbiol. 2015 Mar;81(6):2125-36. doi: 10.1128/AEM.03387-14. Epub 2015 Jan 16.


Influence of DNA extraction method, 16S rRNA targeted hypervariable regions, and sample origin on microbial diversity detected by 454 pyrosequencing in marine chemosynthetic ecosystems.

Cruaud P, Vigneron A, Lucchetti-Miganeh C, Ciron PE, Godfroy A, Cambon-Bonavita MA.

Appl Environ Microbiol. 2014 Aug;80(15):4626-39.


The gill chamber epibiosis of deep-sea shrimp Rimicaris exoculata: an in-depth metagenomic investigation and discovery of Zetaproteobacteria.

Jan C, Petersen JM, Werner J, Teeling H, Huang S, Glöckner FO, Golyshina OV, Dubilier N, Golyshin PN, Jebbar M, Cambon-Bonavita MA.

Environ Microbiol. 2014 Sep;16(9):2723-38. doi: 10.1111/1462-2920.12406. Epub 2014 Mar 4.


Bacterial communities and syntrophic associations involved in anaerobic oxidation of methane process of the Sonora Margin cold seeps, Guaymas Basin.

Vigneron A, Cruaud P, Pignet P, Caprais JC, Gayet N, Cambon-Bonavita MA, Godfroy A, Toffin L.

Environ Microbiol. 2014 Sep;16(9):2777-90. doi: 10.1111/1462-2920.12324. Epub 2013 Dec 13.


Archaeal and anaerobic methane oxidizer communities in the Sonora Margin cold seeps, Guaymas Basin (Gulf of California).

Vigneron A, Cruaud P, Pignet P, Caprais JC, Cambon-Bonavita MA, Godfroy A, Toffin L.

ISME J. 2013 Aug;7(8):1595-608. doi: 10.1038/ismej.2013.18. Epub 2013 Feb 28.


Inorganic carbon fixation by chemosynthetic ectosymbionts and nutritional transfers to the hydrothermal vent host-shrimp Rimicaris exoculata.

Ponsard J, Cambon-Bonavita MA, Zbinden M, Lepoint G, Joassin A, Corbari L, Shillito B, Durand L, Cueff-Gauchard V, Compère P.

ISME J. 2013 Jan;7(1):96-109. doi: 10.1038/ismej.2012.87. Epub 2012 Aug 23.


New digestive symbiosis in the hydrothermal vent amphipoda Ventiella sulfuris.

Corbari L, Durand L, Cambon-Bonavita MA, Gaill F, Compère P.

C R Biol. 2012 Feb;335(2):142-54. doi: 10.1016/j.crvi.2011.12.005. Epub 2012 Jan 27.


Acquisition of epibiotic bacteria along the life cycle of the hydrothermal shrimp Rimicaris exoculata.

Guri M, Durand L, Cueff-Gauchard V, Zbinden M, Crassous P, Shillito B, Cambon-Bonavita MA.

ISME J. 2012 Mar;6(3):597-609. doi: 10.1038/ismej.2011.133. Epub 2011 Oct 13.


Diversity and function in microbial mats from the Lucky Strike hydrothermal vent field.

Crépeau V, Cambon Bonavita MA, Lesongeur F, Randrianalivelo H, Sarradin PM, Sarrazin J, Godfroy A.

FEMS Microbiol Ecol. 2011 Jun;76(3):524-40. doi: 10.1111/j.1574-6941.2011.01070.x. Epub 2011 Mar 15.


Pyrococcus yayanosii sp. nov., an obligate piezophilic hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent.

Birrien JL, Zeng X, Jebbar M, Cambon-Bonavita MA, Quérellou J, Oger P, Bienvenu N, Xiao X, Prieur D.

Int J Syst Evol Microbiol. 2011 Dec;61(Pt 12):2827-31. doi: 10.1099/ijs.0.024653-0. Epub 2011 Jan 14.


Dual symbiosis of the vent shrimp Rimicaris exoculata with filamentous gamma- and epsilonproteobacteria at four Mid-Atlantic Ridge hydrothermal vent fields.

Petersen JM, Ramette A, Lott C, Cambon-Bonavita MA, Zbinden M, Dubilier N.

Environ Microbiol. 2010 Aug;12(8):2204-18. doi: 10.1111/j.1462-2920.2009.02129.x. Epub 2009 Dec 27.


Marine culturable yeasts in deep-sea hydrothermal vents: species richness and association with fauna.

Burgaud G, Arzur D, Durand L, Cambon-Bonavita MA, Barbier G.

FEMS Microbiol Ecol. 2010 Jul 1;73(1):121-33. doi: 10.1111/j.1574-6941.2010.00881.x. Epub 2010 Apr 7.


Microbial diversity associated with the hydrothermal shrimp Rimicaris exoculata gut and occurrence of a resident microbial community.

Durand L, Zbinden M, Cueff-Gauchard V, Duperron S, Roussel EG, Shillito B, Cambon-Bonavita MA.

FEMS Microbiol Ecol. 2010 Feb;71(2):291-303. doi: 10.1111/j.1574-6941.2009.00806.x. Epub 2009 Nov 3.


Archaeal communities associated with shallow to deep subseafloor sediments of the New Caledonia Basin.

Roussel EG, Sauvadet AL, Chaduteau C, Fouquet Y, Charlou JL, Prieur D, Cambon Bonavita MA.

Environ Microbiol. 2009 Sep;11(9):2446-62. doi: 10.1111/j.1462-2920.2009.01976.x. Epub 2009 Jul 16.


Nautilia abyssi sp. nov., a thermophilic, chemolithoautotrophic, sulfur-reducing bacterium isolated from an East Pacific Rise hydrothermal vent.

Alain K, Callac N, Guégan M, Lesongeur F, Crassous P, Cambon-Bonavita MA, Querellou J, Prieur D.

Int J Syst Evol Microbiol. 2009 Jun;59(Pt 6):1310-5. doi: 10.1099/ijs.0.005454-0.


Pyrococcus CH1, an obligate piezophilic hyperthermophile: extending the upper pressure-temperature limits for life.

Zeng X, Birrien JL, Fouquet Y, Cherkashov G, Jebbar M, Querellou J, Oger P, Cambon-Bonavita MA, Xiao X, Prieur D.

ISME J. 2009 Jul;3(7):873-6. doi: 10.1038/ismej.2009.21. Epub 2009 Mar 19.


Novel uncultured Epsilonproteobacteria dominate a filamentous sulphur mat from the 13 degrees N hydrothermal vent field, East Pacific Rise.

Moussard H, Corre E, Cambon-Bonavita MA, Fouquet Y, Jeanthon C.

FEMS Microbiol Ecol. 2006 Dec;58(3):449-63. Epub 2006 Sep 21.


Uncultured Archaea in a hydrothermal microbial assemblage: phylogenetic diversity and characterization of a genome fragment from a euryarchaeote.

Moussard H, Moreira D, Cambon-Bonavita MA, López-García P, Jeanthon C.

FEMS Microbiol Ecol. 2006 Sep;57(3):452-69.


Early steps in microbial colonization processes at deep-sea hydrothermal vents.

Alain K, Zbinden M, Le Bris N, Lesongeur F, Quérellou J, Gaill F, Cambon-Bonavita MA.

Environ Microbiol. 2004 Mar;6(3):227-41.


Occurrence of Deferribacterales and Entomoplasmatales in the deep-sea Alvinocarid shrimp Rimicaris exoculata gut.

Zbinden M, Cambon-Bonavita MA.

FEMS Microbiol Ecol. 2003 Oct 1;46(1):23-30. doi: 10.1016/S0168-6496(03)00176-4.


Desulfurobacterium crinifex sp. nov., a novel thermophilic, pinkish-streamer forming, chemolithoautotrophic bacterium isolated from a Juan de Fuca Ridge hydrothermal vent and amendment of the genus Desulfurobacterium.

Alain K, Rolland S, Crassous P, Lesongeur F, Zbinden M, le Gall C, Godfroy A, Page A, Juniper SK, Cambon-Bonavita MA, Duchiron F, Querellou J.

Extremophiles. 2003 Oct;7(5):361-70. Epub 2003 May 13.


A novel, highly viscous polysaccharide excreted by an alteromonas isolated from a deep-sea hydrothermal vent shrimp.

Raguénès G, Cambon-Bonavita MA, Lohier JF, Boisset C, Guezennec J.

Curr Microbiol. 2003 Jun;46(6):448-52.


Thermococcus atlanticus sp nov., a hyperthermophilic Archaeon isolated from a deep-sea hydrothermal vent in the Mid-Atlantic Ridge [corrected].

Cambon-Bonavita MA, Lesongeur F, Pignet P, Wery N, Lambert C, Godfroy A, Querellou J, Barbier G.

Extremophiles. 2003 Apr;7(2):101-9. Epub 2002 Nov 23. Erratum in: Extremophiles. 2003 Aug;7(4):339.


Phylogenetic characterization of the bacterial assemblage associated with mucous secretions of the hydrothermal vent polychaete Paralvinella palmiformis.

Alain K, Olagnon M, Desbruyères D, Pagé A, Barbier G, Juniper SK, Quérellou J, Cambon-Bonavita MA.

FEMS Microbiol Ecol. 2002 Dec 1;42(3):463-76. doi: 10.1111/j.1574-6941.2002.tb01035.x.


Genetic diversity and molecular detection of three toxic dinoflagellate genera (Alexandrium, Dinophysis, and Karenia) from French coasts.

Guillou L, Nézan E, Cueff V, Erard-Le Denn E, Cambon-Bonavita MA, Gentien P, Barbier G.

Protist. 2002 Sep;153(3):223-38.


Caminicella sporogenes gen. nov., sp. nov., a novel thermophilic spore-forming bacterium isolated from an East-Pacific Rise hydrothermal vent.

Alain K, Pignet P, Zbinden M, Quillevere M, Duchiron F, Donval JP, Lesongeur F, Raguenes G, Crassous P, Querellou J, Cambon-Bonavita MA.

Int J Syst Evol Microbiol. 2002 Sep;52(Pt 5):1621-8.


Caminibacter hydrogeniphilus gen. nov., sp. nov., a novel thermophilic, hydrogen-oxidizing bacterium isolated from an East Pacific Rise hydrothermal vent.

Alain K, Querellou J, Lesongeur F, Pignet P, Crassous P, Raguénès G, Cueff V, Cambon-Bonavita MA.

Int J Syst Evol Microbiol. 2002 Jul;52(Pt 4):1317-23.


Diversity of anaerobic heterotrophic thermophiles isolated from deep-sea hydrothermal vents of the Mid-Atlantic Ridge.

Wery N, Cambon-Bonavita MA, Lesongeur F, Barbier G.

FEMS Microbiol Ecol. 2002 Aug 1;41(2):105-14. doi: 10.1111/j.1574-6941.2002.tb00971.x.


A novel polymer produced by a bacterium isolated from a deep-sea hydrothermal vent polychaete annelid.

Cambon-Bonavita MA, Raguénès G, Jean J, Vincent P, Guezennec J.

J Appl Microbiol. 2002;93(2):310-5.


Microbial diversity in smoked salmon examined by a culture-independent molecular approach--a preliminary study.

Cambon-Bonavita MA, Lesongeur F, Menoux S, Lebourg A, Barbier G.

Int J Food Microbiol. 2001 Oct 22;70(1-2):179-87.


Caloranaerobacter azorensis gen. nov., sp. nov., an anaerobic thermophilic bacterium isolated from a deep-sea hydrothermal vent.

Wery N, Moricet JM, Cueff V, Jean J, Pignet P, Lesongeur F, Cambon-Bonavita MA, Barbier G.

Int J Syst Evol Microbiol. 2001 Sep;51(Pt 5):1789-96.


Marinitoga camini gen. nov., sp. nov., a rod-shaped bacterium belonging to the order Thermotogales, isolated from a deep-sea hydrothermal vent.

Wery N, Lesongeur F, Pignet P, Derennes V, Cambon-Bonavita MA, Godfroy A, Barbier G.

Int J Syst Evol Microbiol. 2001 Mar;51(Pt 2):495-504.


Cloning, expression, and characterization of DNA polymerase I from the hyperthermophilic archaea Thermococcus fumicolans.

Cambon-Bonavita MA, Schmitt P, Zieger M, Flaman JM, Lesongeur F, Raguénès G, Bindel D, Frisch N, Lakkis Z, Dupret D, Barbier G, Quérellou J.

Extremophiles. 2000 Aug;4(4):215-25.


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