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Items: 22

1.

Metabolomic and Metagenomic Analysis of Two Crude Oil Production Pipelines Experiencing Differential Rates of Corrosion.

Bonifay V, Wawrik B, Sunner J, Snodgrass EC, Aydin E, Duncan KE, Callaghan AV, Oldham A, Liengen T, Beech I.

Front Microbiol. 2017 Jan 31;8:99. doi: 10.3389/fmicb.2017.00099. eCollection 2017.

2.

Methanogenic paraffin degradation proceeds via alkane addition to fumarate by 'Smithella' spp. mediated by a syntrophic coupling with hydrogenotrophic methanogens.

Wawrik B, Marks CR, Davidova IA, McInerney MJ, Pruitt S, Duncan KE, Suflita JM, Callaghan AV.

Environ Microbiol. 2016 Sep;18(8):2604-19. doi: 10.1111/1462-2920.13374. Epub 2016 Jun 27.

PMID:
27198766
3.

Transcriptional response of Desulfatibacillum alkenivorans AK-01 to growth on alkanes: insights from RT-qPCR and microarray analyses.

Herath A, Wawrik B, Qin Y, Zhou J, Callaghan AV.

FEMS Microbiol Ecol. 2016 May;92(5):fiw062. doi: 10.1093/femsec/fiw062. Epub 2016 Mar 23.

4.

Dethiosulfatarculus sandiegensis gen. nov., sp. nov., isolated from a methanogenic paraffin-degrading enrichment culture and emended description of the family Desulfarculaceae.

Davidova IA, Wawrik B, Callaghan AV, Duncan K, Marks CR, Suflita JM.

Int J Syst Evol Microbiol. 2016 Mar;66(3):1242-1248. doi: 10.1099/ijsem.0.000864. Epub 2015 Dec 23.

PMID:
26704417
5.

Interrogation of Chesapeake Bay sediment microbial communities for intrinsic alkane-utilizing potential under anaerobic conditions.

Johnson JM, Wawrik B, Isom C, Boling WB, Callaghan AV.

FEMS Microbiol Ecol. 2015 Feb;91(2):1-14. doi: 10.1093/femsec/fiu035. Epub 2014 Dec 24.

6.

Microbial transformation of the Deepwater Horizon oil spill-past, present, and future perspectives.

Kimes NE, Callaghan AV, Suflita JM, Morris PJ.

Front Microbiol. 2014 Nov 18;5:603. doi: 10.3389/fmicb.2014.00603. eCollection 2014. Review.

7.

Biosphere frontiers of subsurface life in the sedimented hydrothermal system of Guaymas Basin.

Teske A, Callaghan AV, LaRowe DE.

Front Microbiol. 2014 Jul 31;5:362. doi: 10.3389/fmicb.2014.00362. eCollection 2014.

8.

Genome Sequence of Youngiibacter fragilis, the Type Strain of the Genus Youngiibacter.

Wawrik CB, Callaghan AV, Stamps BW, Wawrik B.

Genome Announc. 2014 Jan 23;2(1). pii: e01183-13. doi: 10.1128/genomeA.01183-13.

9.

Microbial enzymes that oxidize hydrocarbons.

Austin RN, Callaghan AV.

Front Microbiol. 2013 Nov 13;4:338. doi: 10.3389/fmicb.2013.00338. eCollection 2013. No abstract available.

10.

Youngiibacter fragilis gen. nov., sp. nov., isolated from natural gas production-water and reclassification of Acetivibrio multivorans as Youngiibacter multivorans comb. nov.

Lawson PA, Wawrik B, Allen TD, Johnson CN, Marks CR, Tanner RS, Harriman BH, Strąpoc D, Callaghan AV.

Int J Syst Evol Microbiol. 2014 Jan;64(Pt 1):198-205. doi: 10.1099/ijs.0.053728-0. Epub 2013 Sep 18.

PMID:
24048874
11.

Enzymes involved in the anaerobic oxidation of n-alkanes: from methane to long-chain paraffins.

Callaghan AV.

Front Microbiol. 2013 May 14;4:89. doi: 10.3389/fmicb.2013.00089. eCollection 2013.

12.

Impact of organosulfur content on diesel fuel stability and implications for carbon steel corrosion.

Lyles CN, Aktas DF, Duncan KE, Callaghan AV, Stevenson BS, Suflita JM.

Environ Sci Technol. 2013 Jun 4;47(11):6052-62. doi: 10.1021/es4006702. Epub 2013 May 21.

PMID:
23614475
13.

Metagenomic analysis and metabolite profiling of deep-sea sediments from the Gulf of Mexico following the Deepwater Horizon oil spill.

Kimes NE, Callaghan AV, Aktas DF, Smith WL, Sunner J, Golding B, Drozdowska M, Hazen TC, Suflita JM, Morris PJ.

Front Microbiol. 2013 Mar 15;4:50. doi: 10.3389/fmicb.2013.00050. eCollection 2013.

14.

Metabolomic investigations of anaerobic hydrocarbon-impacted environments.

Callaghan AV.

Curr Opin Biotechnol. 2013 Jun;24(3):506-15. doi: 10.1016/j.copbio.2012.08.012. Epub 2012 Sep 19. Review.

PMID:
22999828
15.

Field and laboratory studies on the bioconversion of coal to methane in the San Juan Basin.

Wawrik B, Mendivelso M, Parisi VA, Suflita JM, Davidova IA, Marks CR, Van Nostrand JD, Liang Y, Zhou J, Huizinga BJ, Strąpoć D, Callaghan AV.

FEMS Microbiol Ecol. 2012 Jul;81(1):26-42. doi: 10.1111/j.1574-6941.2011.01272.x. Epub 2012 Jan 11.

16.

The genome sequence of Desulfatibacillum alkenivorans AK-01: a blueprint for anaerobic alkane oxidation.

Callaghan AV, Morris BE, Pereira IA, McInerney MJ, Austin RN, Groves JT, Kukor JJ, Suflita JM, Young LY, Zylstra GJ, Wawrik B.

Environ Microbiol. 2012 Jan;14(1):101-13. doi: 10.1111/j.1462-2920.2011.02516.x. Epub 2011 Jun 8.

PMID:
21651686
17.

Diversity of benzyl- and alkylsuccinate synthase genes in hydrocarbon-impacted environments and enrichment cultures.

Callaghan AV, Davidova IA, Savage-Ashlock K, Parisi VA, Gieg LM, Suflita JM, Kukor JJ, Wawrik B.

Environ Sci Technol. 2010 Oct 1;44(19):7287-94. doi: 10.1021/es1002023.

PMID:
20504044
18.

Use of inorganic and organic nitrogen by Synechococcus spp. and diatoms on the west Florida shelf as measured using stable isotope probing.

Wawrik B, Callaghan AV, Bronk DA.

Appl Environ Microbiol. 2009 Nov;75(21):6662-70. doi: 10.1128/AEM.01002-09. Epub 2009 Sep 4.

19.

Dense nonaqueous phase liquid architecture and dissolution in discretely fractured sandstone blocks.

Schaefer CE, Callaghan AV, King JD, McCray JE.

Environ Sci Technol. 2009 Mar 15;43(6):1877-83. Erratum in: Environ Sci Technol. 2009 May 1;43(9):3402.

PMID:
19368186
20.

Anaerobic biodegradation of n-hexadecane by a nitrate-reducing consortium.

Callaghan AV, Tierney M, Phelps CD, Young LY.

Appl Environ Microbiol. 2009 Mar;75(5):1339-44. doi: 10.1128/AEM.02491-08. Epub 2008 Dec 29.

21.

Anaerobic alkane-degrading strain AK-01 contains two alkylsuccinate synthase genes.

Callaghan AV, Wawrik B, Ní Chadhain SM, Young LY, Zylstra GJ.

Biochem Biophys Res Commun. 2008 Feb 1;366(1):142-8. Epub 2007 Nov 29.

PMID:
18053803
22.

Comparison of mechanisms of alkane metabolism under sulfate-reducing conditions among two bacterial isolates and a bacterial consortium.

Callaghan AV, Gieg LM, Kropp KG, Suflita JM, Young LY.

Appl Environ Microbiol. 2006 Jun;72(6):4274-82.

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