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Association between the oral microbiome and brain resting state connectivity in smokers.

Lin D, Hutchison KE, Portillo S, Vegara V, Ellingson JM, Liu J, Krauter KS, Carroll-Portillo A, Calhoun VD.

Neuroimage. 2019 Jun 12. pii: S1053-8119(19)30514-2. doi: 10.1016/j.neuroimage.2019.06.023. [Epub ahead of print]


A Manifold Regularized Multi-Task Learning Model for IQ Prediction from Two fMRI Paradigms.

Xiao L, Stephen JM, Wilson TW, Calhoun VD, Wang YP.

IEEE Trans Biomed Eng. 2019 Jun 5. doi: 10.1109/TBME.2019.2921207. [Epub ahead of print]


Brain function, structure and genomic data are linked but show different sensitivity to duration of illness and disease stage in schizophrenia.

Luo N, Tian L, Calhoun VD, Chen J, Lin D, Vergara VM, Rao S, Yang J, Zhuo C, Xu Y, Turner JA, Zhang F, Sui J.

Neuroimage Clin. 2019 May 31;23:101887. doi: 10.1016/j.nicl.2019.101887. [Epub ahead of print]


Multimodal Magnetic Resonance Imaging Data Fusion Reveals Distinct Patterns of Abnormal Brain Structure and Function in Catatonia.

Hirjak D, Rashidi M, Kubera KM, Northoff G, Fritze S, Schmitgen MM, Sambataro F, Calhoun VD, Wolf RC.

Schizophr Bull. 2019 Jun 8. pii: sbz042. doi: 10.1093/schbul/sbz042. [Epub ahead of print]


Dentate gyrus volume deficit in schizophrenia.

Nakahara S, Turner JA, Calhoun VD, Lim KO, Mueller B, Bustillo JR, O'Leary DS, McEwen S, Voyvodic J, Belger A, Mathalon DH, Ford JM, Macciardi F, Matsumoto M, Potkin SG, van Erp TGM.

Psychol Med. 2019 Jun 3:1-11. doi: 10.1017/S0033291719001144. [Epub ahead of print]


Default mode dysfunction underpins suicidal activity in mood disorders.

Malhi GS, Das P, Outhred T, Bryant RA, Calhoun V, Mann JJ.

Psychol Med. 2019 May 30:1-10. doi: 10.1017/S0033291719001132. [Epub ahead of print]


Unraveling Diagnostic Biomarkers of Schizophrenia Through Structure-Revealing Fusion of Multi-Modal Neuroimaging Data.

Acar E, Schenker C, Levin-Schwartz Y, Calhoun VD, Adali T.

Front Neurosci. 2019 May 3;13:416. doi: 10.3389/fnins.2019.00416. eCollection 2019.


Relationship between MEG global dynamic functional network connectivity measures and symptoms in schizophrenia.

Sanfratello L, Houck JM, Calhoun VD.

Schizophr Res. 2019 May 23. pii: S0920-9964(19)30168-9. doi: 10.1016/j.schres.2019.05.007. [Epub ahead of print]


Adolescent sex differences in cortico-subcortical functional connectivity during response inhibition.

Chung YS, Calhoun V, Stevens MC.

Cogn Affect Behav Neurosci. 2019 May 20. doi: 10.3758/s13415-019-00718-y. [Epub ahead of print]


Adolescent Psychopathic Traits Negatively Relate to Hemodynamic Activity within the Basal Ganglia during Error-Related Processing.

Maurer JM, Steele VR, Vincent GM, Rao V, Calhoun VD, Kiehl KA.

J Abnorm Child Psychol. 2019 May 18. doi: 10.1007/s10802-019-00560-3. [Epub ahead of print]


Parallel group ICA+ICA: Joint estimation of linked functional network variability and structural covariation with application to schizophrenia.

Qi S, Sui J, Chen J, Liu J, Jiang R, Silva R, Iraji A, Damaraju E, Salman M, Lin D, Fu Z, Zhi D, Turner JA, Bustillo J, Ford JM, Mathalon DH, Voyvodic J, McEwen S, Preda A, Belger A, Potkin SG, Mueller BA, Adali T, Calhoun VD.

Hum Brain Mapp. 2019 May 16. doi: 10.1002/hbm.24632. [Epub ahead of print]


Abnormal thalamocortical network dynamics in migraine.

Tu Y, Fu Z, Zeng F, Maleki N, Lan L, Li Z, Park J, Wilson G, Gao Y, Liu M, Calhoun V, Liang F, Kong J.

Neurology. 2019 Jun 4;92(23):e2706-e2716. doi: 10.1212/WNL.0000000000007607. Epub 2019 May 10.


Multilevel Mapping of Sexual Dimorphism in Intrinsic Functional Brain Networks.

de Lacy N, McCauley E, Kutz JN, Calhoun VD.

Front Neurosci. 2019 Apr 5;13:332. doi: 10.3389/fnins.2019.00332. eCollection 2019.


Multivariate Analyses Reveal Biological Components Related to Neuronal Signaling and Immunity Mediating Electroencephalograms Abnormalities in Alcohol-Dependent Individuals from the Collaborative Study on the Genetics of Alcoholism Cohort.

Meda SA, Narayanan B, Chorlian D, Meyers JL, Gelernter J, Hesselbrock V, Bauer L, Calhoun VD, Porjesz B, Pearlson GD.

Alcohol Clin Exp Res. 2019 Apr 22. doi: 10.1111/acer.14063. [Epub ahead of print]


Autoconnectivity: A new perspective on human brain function.

Arbabshirani MR, Preda A, Vaidya JG, Potkin SG, Pearlson G, Voyvodic J, Mathalon D, van Erp T, Michael A, Kiehl KA, Turner JA, Calhoun VD.

J Neurosci Methods. 2019 Jul 15;323:68-76. doi: 10.1016/j.jneumeth.2019.03.015. Epub 2019 Apr 18.


Distance canonical correlation analysis with application to an imaging-genetic study.

Hu W, Zhang A, Cai B, Calhoun V, Wang YP.

J Med Imaging (Bellingham). 2019 Apr;6(2):026501. doi: 10.1117/1.JMI.6.2.026501. Epub 2019 Apr 11.


Altered static and dynamic functional network connectivity in Alzheimer's disease and subcortical ischemic vascular disease: shared and specific brain connectivity abnormalities.

Fu Z, Caprihan A, Chen J, Du Y, Adair JC, Sui J, Rosenberg GA, Calhoun VD.

Hum Brain Mapp. 2019 Apr 5. doi: 10.1002/hbm.24591. [Epub ahead of print]


N-BiC: A method for multi-component and symptom biclustering of structural MRI data: Application to schizophrenia.

Rahaman MA, Turner JA, Gupta CN, Rachakonda S, Chen J, Liu JY, van Erp TGM, Potkin S, Ford JM, Mathalon DH, Lee HJ, Jiang W, Mueller B, Andreassen O, Agartz I, Sponheim SR, Mayer A, Stephen JM, Jung R, Canive J, Bustillo J, Calhoun VD.

IEEE Trans Biomed Eng. 2019 Apr 1. doi: 10.1109/TBME.2019.2908815. [Epub ahead of print]


Phase fMRI Reveals More Sparseness and Balance of Rest Brain Functional Connectivity Than Magnitude fMRI.

Chen Z, Fu Z, Calhoun V.

Front Neurosci. 2019 Mar 18;13:204. doi: 10.3389/fnins.2019.00204. eCollection 2019.


Concurrent Cross-Sectional and Longitudinal Analyses of Multivariate White Matter Profiles and Clinical Functioning in Pre-Diagnosis Huntington Disease.

Ciarochi JA, Johnson HJ, Calhoun VD, Liu J, Espinoza FA, Bockholt HJ, Misiura M, Caprihan A, Plis S, Paulsen JS, Turner JA; PREDICT-HD Investigators and Coordinators of the Huntington Study Group.

J Huntingtons Dis. 2019;8(2):199-219. doi: 10.3233/JHD-180332.


Group ICA for identifying biomarkers in schizophrenia: 'Adaptive' networks via spatially constrained ICA show more sensitivity to group differences than spatio-temporal regression.

Salman MS, Du Y, Lin D, Fu Z, Fedorov A, Damaraju E, Sui J, Chen J, Mayer AR, Posse S, Mathalon DH, Ford JM, Van Erp T, Calhoun VD.

Neuroimage Clin. 2019;22:101747. doi: 10.1016/j.nicl.2019.101747. Epub 2019 Mar 5.


Commentary on "Assessment of Spinal Curvatures in Children With Upper Trunk Obstetrical Brachial Plexus Palsy".

Calhoun V, Patterson J.

Pediatr Phys Ther. 2019 Apr;31(2):155. doi: 10.1097/PEP.0000000000000599. No abstract available.


A method for building a genome-connectome bipartite graph model.

Yu Q, Chen J, Du Y, Sui J, Damaraju E, Turner JA, van Erp TGM, Macciardi F, Belger A, Ford JM, McEwen S, Mathalon DH, Mueller BA, Preda A, Vaidya J, Pearlson GD, Calhoun VD.

J Neurosci Methods. 2019 May 15;320:64-71. doi: 10.1016/j.jneumeth.2019.03.011. Epub 2019 Mar 19.


Structure/function interrelationships in patients with schizophrenia who have persistent auditory verbal hallucinations: A multimodal MRI study using parallel ICA.

Kubera KM, Rashidi M, Schmitgen MM, Barth A, Hirjak D, Sambataro F, Calhoun VD, Wolf RC.

Prog Neuropsychopharmacol Biol Psychiatry. 2019 Jul 13;93:114-121. doi: 10.1016/j.pnpbp.2019.03.007. Epub 2019 Mar 16.


The spatial chronnectome reveals a dynamic interplay between functional segregation and integration.

Iraji A, Deramus TP, Lewis N, Yaesoubi M, Stephen JM, Erhardt E, Belger A, Ford JM, McEwen S, Mathalon DH, Mueller BA, Pearlson GD, Potkin SG, Preda A, Turner JA, Vaidya JG, van Erp TGM, Calhoun VD.

Hum Brain Mapp. 2019 Jul;40(10):3058-3077. doi: 10.1002/hbm.24580. Epub 2019 Mar 18.


Resting-state neural network disturbances that underpin the emergence of emotional symptoms in adolescent girls: resting-state fMRI study.

Malhi GS, Das P, Outhred T, Bryant RA, Calhoun V.

Br J Psychiatry. 2019 Mar 18:1-7. doi: 10.1192/bjp.2019.10. [Epub ahead of print]


Deep collaborative learning with application to multimodal brain development study.

Hu W, Cai B, Zhang A, Calhoun VD, Wang YP.

IEEE Trans Biomed Eng. 2019 Mar 13. doi: 10.1109/TBME.2019.2904301. [Epub ahead of print]


Phase fMRI informs whole-brain function connectivity balance across lifespan with connection-specific aging effects during the resting state.

Chen Z, Zhou Q, Calhoun V.

Brain Struct Funct. 2019 May;224(4):1489-1503. doi: 10.1007/s00429-019-01850-8. Epub 2019 Mar 2.


Positive and general psychopathology associated with specific gray matter reductions in inferior temporal regions in patients with schizophrenia.

Mennigen E, Jiang W, Calhoun VD, van Erp TGM, Agartz I, Ford JM, Mueller BA, Liu J, Turner JA.

Schizophr Res. 2019 Jun;208:242-249. doi: 10.1016/j.schres.2019.02.010. Epub 2019 Feb 26.


Spatial source phase: A new feature for identifying spatial differences based on complex-valued resting-state fMRI data.

Qiu Y, Lin QH, Kuang LD, Gong XF, Cong F, Wang YP, Calhoun VD.

Hum Brain Mapp. 2019 Jun 15;40(9):2662-2676. doi: 10.1002/hbm.24551. Epub 2019 Feb 27.


Apathy Is Related to Cognitive Control and Striatum Volumes in Prodromal Huntington's Disease.

Misiura MB, Ciarochi J, Vaidya J, Bockholt J, Johnson HJ, Calhoun VD, Paulsen JS, Turner JA; PREDICT-HD Investigators & Working Group.

J Int Neuropsychol Soc. 2019 May;25(5):462-469. doi: 10.1017/S1355617719000067. Epub 2019 Feb 26.


Dynamic connectivity and the effects of maturation in youth with attention deficit hyperactivity disorder.

de Lacy N, Calhoun VD.

Netw Neurosci. 2018 Dec 1;3(1):195-216. doi: 10.1162/netn_a_00063. eCollection 2019.


Time-varying whole-brain functional network connectivity coupled to task engagement.

Xie H, Gonzalez-Castillo J, Handwerker DA, Bandettini PA, Calhoun VD, Chen G, Damaraju E, Liu X, Mitra S.

Netw Neurosci. 2018 Oct 1;3(1):49-66. doi: 10.1162/netn_a_00051. eCollection 2019.


Integration of imaging (epi)genomics data for the study of schizophrenia using group sparse joint nonnegative matrix factorization.

Wang M, Huang TZ, Fang J, Calhoun VD, Wang YP.

IEEE/ACM Trans Comput Biol Bioinform. 2019 Feb 14. doi: 10.1109/TCBB.2019.2899568. [Epub ahead of print]


Resting state connectivity differences in eyes open versus eyes closed conditions.

Agcaoglu O, Wilson TW, Wang YP, Stephen J, Calhoun VD.

Hum Brain Mapp. 2019 Jun 1;40(8):2488-2498. doi: 10.1002/hbm.24539. Epub 2019 Feb 5.


The inner fluctuations of the brain in presymptomatic Frontotemporal Dementia: The chronnectome fingerprint.

Premi E, Calhoun VD, Diano M, Gazzina S, Cosseddu M, Alberici A, Archetti S, Paternicò D, Gasparotti R, van Swieten J, Galimberti D, Sanchez-Valle R, Laforce R Jr, Moreno F, Synofzik M, Graff C, Masellis M, Tartaglia MC, Rowe J, Vandenberghe R, Finger E, Tagliavini F, de Mendonça A, Santana I, Butler C, Ducharme S, Gerhard A, Danek A, Levin J, Otto M, Frisoni G, Cappa S, Sorbi S, Padovani A, Rohrer JD, Borroni B; Genetic FTD Initiative, GENFI.

Neuroimage. 2019 Apr 1;189:645-654. doi: 10.1016/j.neuroimage.2019.01.080. Epub 2019 Feb 1.


Correction: Dose response of the 16p11.2 distal copy number variant on intracranial volume and basal ganglia.

Sønderby IE, Gústafsson Ó, Doan NT, Hibar DP, Martin-Brevet S, Abdellaoui A, Ames D, Amunts K, Andersson M, Armstrong NJ, Bernard M, Blackburn N, Blangero J, Boomsma DI, Bralten J, Brattbak HR, Brodaty H, Brouwer RM, Bülow R, Calhoun V, Caspers S, Cavalleri G, Chen CH, Cichon S, Ciufolini S, Corvin A, Crespo-Facorro B, Curran JE, Dale AM, Dalvie S, Dazzan P, de Geus EJC, de Zubicaray GI, de Zwarte SMC, Delanty N, den Braber A, Desrivières S, Donohoe G, Draganski B, Ehrlich S, Espeseth T, Fisher SE, Franke B, Frouin V, Fukunaga M, Gareau T, Glahn DC, Grabe H, Groenewold NA, Haavik J, Håberg A, Hashimoto R, Hehir-Kwa JY, Heinz A, Hillegers MHJ, Hoffmann P, Holleran L, Hottenga JJ, Hulshoff HE, Ikeda M, Jahanshad N, Jernigan T, Jockwitz C, Johansson S, Jonsdottir GA, Jönsson EG, Kahn R, Kaufmann T, Kelly S, Kikuchi M, Knowles EEM, Kolskår KK, Kwok JB, Hellard SL, Leu C, Liu J, Lundervold AJ, Lundervold A, Martin NG, Mather K, Mathias SR, McCormack M, McMahon KL, McRae A, Milaneschi Y, Moreau C, Morris D, Mothersill D, Mühleisen TW, Murray R, Nordvik JE, Nyberg L, Olde Loohuis LM, Ophoff R, Paus T, Pausova Z, Penninx B, Peralta JM, Pike B, Prieto C, Pudas S, Quinlan E, Quintana DS, Reinbold CS, Marques TR, Reymond A, Richard G, Rodriguez-Herreros B, Roiz-Santiañez R, Rokicki J, Rucker J, Sachdev P, Sanders AM, Sando SB, Schmaal L, Schofield PR, Schork AJ, Schumann G, Shin J, Shumskaya E, Sisodiya S, Steen VM, Stein DJ, Steinberg S, Strike L, Teumer A, Thalamuthu A, Tordesillas-Gutierrez D, Turner J, Ueland T, Uhlmann A, Ulfarsson MO, van 't Ent D, van der Meer D, van Haren NEM, Vaskinn A, Vassos E, Walters GB, Wang Y, Wen W, Whelan CD, Wittfeld K, Wright M, Yamamori H, Zayats T, Agartz I, Westlye LT, Jacquemont S, Djurovic S, Stefánsson H, Stefánsson K, Thompson P, Andreassen OA; 16p11.2 European Consortium, for the ENIGMA-CNV working group.

Mol Psychiatry. 2019 Jan 31. doi: 10.1038/s41380-019-0358-8. [Epub ahead of print]


Extraction of time-varying spatio-temporal networks using parameter-tuned constrained IVA.

Bhinge S, Mowakeaa R, Calhoun VD, Adali T.

IEEE Trans Med Imaging. 2019 Jan 23. doi: 10.1109/TMI.2019.2893651. [Epub ahead of print]


An average sliding window correlation method for dynamic functional connectivity.

Vergara VM, Abrol A, Calhoun VD.

Hum Brain Mapp. 2019 May;40(7):2089-2103. doi: 10.1002/hbm.24509. Epub 2019 Jan 19.


Dynamic functional network connectivity in Huntington's disease and its associations with motor and cognitive measures.

Espinoza FA, Liu J, Ciarochi J, Turner JA, Vergara VM, Caprihan A, Misiura M, Johnson HJ, Long JD, Bockholt JH, Paulsen JS, Calhoun VD.

Hum Brain Mapp. 2019 Apr 15;40(6):1955-1968. doi: 10.1002/hbm.24504. Epub 2019 Jan 7.


Spatial dynamics within and between brain functional domains: A hierarchical approach to study time-varying brain function.

Iraji A, Fu Z, Damaraju E, DeRamus TP, Lewis N, Bustillo JR, Lenroot RK, Belger A, Ford JM, McEwen S, Mathalon DH, Mueller BA, Pearlson GD, Potkin SG, Preda A, Turner JA, Vaidya JG, van Erp TGM, Calhoun VD.

Hum Brain Mapp. 2019 Apr 15;40(6):1969-1986. doi: 10.1002/hbm.24505. Epub 2018 Dec 26.


Efficacy of different dynamic functional connectivity methods to capture cognitively relevant information.

Xie H, Zheng CY, Handwerker DA, Bandettini PA, Calhoun VD, Mitra S, Gonzalez-Castillo J.

Neuroimage. 2019 Mar;188:502-514. doi: 10.1016/j.neuroimage.2018.12.037. Epub 2018 Dec 18.


Precision medicine and global mental health.

Schumann G, Benegal V, Yu C, Tao S, Jernigan T, Heinz A, Araya R, Yu L, Calhoun V; Global Imaging Genetics in Adolescents Consortium.

Lancet Glob Health. 2019 Jan;7(1):e32. doi: 10.1016/S2214-109X(18)30406-6. No abstract available.


Alternating Diffusion Map Based Fusion of Multimodal Brain Connectivity Networks for IQ Prediction.

Xiao L, Stephen JM, Wilson TW, Calhoun VD, Wang Y.

IEEE Trans Biomed Eng. 2018 Nov 29. doi: 10.1109/TBME.2018.2884129. [Epub ahead of print]


Opposite Epigenetic Associations With Alcohol Use and Exercise Intervention.

Chen J, Hutchison KE, Bryan AD, Filbey FM, Calhoun VD, Claus ED, Lin D, Sui J, Du Y, Liu J.

Front Psychiatry. 2018 Nov 15;9:594. doi: 10.3389/fpsyt.2018.00594. eCollection 2018.


Reply to: New Meta- and Mega-analyses of Magnetic Resonance Imaging Findings in Schizophrenia: Do They Really Increase Our Knowledge About the Nature of the Disease Process?

van Erp TGM, Walton E, Hibar DP, Schmaal L, Jiang W, Glahn DC, Pearlson GD, Yao N, Fukunaga M, Hashimoto R, Okada N, Yamamori H, Clark VP, Mueller BA, de Zwarte SMC, Ophoff RA, van Haren NEM, Andreassen OA, Gurholt TP, Gruber O, Kraemer B, Richter A, Calhoun VD, Crespo-Facorro B, Roiz-Santiañez R, Tordesillas-Gutiérrez D, Loughland C, Catts S, Fullerton JM, Green MJ, Henskens F, Jablensky A, Mowry BJ, Pantelis C, Quidé Y, Schall U, Scott RJ, Cairns MJ, Seal M, Tooney PA, Rasser PE, Cooper G, Shannon Weickert C, Weickert TW, Hong E, Kochunov P, Gur RE, Gur RC, Ford JM, Macciardi F, Mathalon DH, Potkin SG, Preda A, Fan F, Ehrlich S, King MD, De Haan L, Veltman DJ, Assogna F, Banaj N, de Rossi P, Iorio M, Piras F, Spalletta G, Pomarol-Clotet E, Kelly S, Ciufolini S, Radua J, Murray R, Marques TR, Simmons A, Borgwardt S, Schönborn-Harrisberger F, Riecher-Rössler A, Smieskova R, Alpert KI, Bertolino A, Bonvino A, Di Giorgio A, Neilson E, Mayer AR, Yun JY, Cannon DM, Lebedeva I, Tomyshev AS, Akhadov T, Kaleda V, Fatouros-Bergman H, Flyckt L; Karolinska Schizophrenia Project, Rosa PGP, Serpa MH, Zanetti MV, Hoschl C, Skoch A, Spaniel F, Tomecek D, McIntosh AM, Whalley HC, Knöchel C, Oertel-Knöchel V, Howells FM, Stein DJ, Temmingh HS, Uhlmann A, Lopez-Jaramillo C, Dima D, Faskowitz JI, Gutman BA, Jahanshad N, Thompson PM, Turner JA.

Biol Psychiatry. 2019 Apr 1;85(7):e35-e39. doi: 10.1016/j.biopsych.2018.10.003. Epub 2018 Nov 22. No abstract available.


Exploring different impaired speed of genetic-related brain function and structures in schizophrenic progress using multimodal analysis.

Luo N, Tian L, Calhoun VD, Chen J, Lin D, Vergara VM, Rao S, Zhang F, Sui J.

Conf Proc IEEE Eng Med Biol Soc. 2018 Jul;2018:4126-4129. doi: 10.1109/EMBC.2018.8513313.


Increased Randomness of Functional Network Connectivity in Nicotine and Alcohol Consumers.

Vergara VM, Hutchison K, Calhoun VD.

Conf Proc IEEE Eng Med Biol Soc. 2018 Jul;2018:1011-1014. doi: 10.1109/EMBC.2018.8512392.


Abnormal Dynamic Functional Network Connectivity and Graph Theoretical Analysis in Major Depressive Disorder.

Zhi D, Ma X, Lv L, Ke Q, Yang Y, Yang X, Pan M, Qi S, Jiang R, Du Y, Yu Q, Calhoun VD, Jiang T, Sui J.

Conf Proc IEEE Eng Med Biol Soc. 2018 Jul;2018:558-561. doi: 10.1109/EMBC.2018.8512340.


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