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Items: 1 to 50 of 189

1.

Patterns of genetic structure and adaptive positive selection in the Lithuanian population from high-density SNP data.

Urnikyte A, Flores-Bello A, Mondal M, Molyte A, Comas D, Calafell F, Bosch E, Kučinskas V.

Sci Rep. 2019 Jun 24;9(1):9163. doi: 10.1038/s41598-019-45746-3.

2.

People from Ibiza: an unexpected isolate in the Western Mediterranean.

Biagini SA, Solé-Morata N, Matisoo-Smith E, Zalloua P, Comas D, Calafell F.

Eur J Hum Genet. 2019 Jun;27(6):941-951. doi: 10.1038/s41431-019-0361-1. Epub 2019 Feb 14.

PMID:
30765884
3.

Ancient DNA of Phoenician remains indicates discontinuity in the settlement history of Ibiza.

Zalloua P, Collins CJ, Gosling A, Biagini SA, Costa B, Kardailsky O, Nigro L, Khalil W, Calafell F, Matisoo-Smith E.

Sci Rep. 2018 Dec 4;8(1):17567. doi: 10.1038/s41598-018-35667-y.

4.

Sequence diversity of the Rh blood group system in Basques.

Flores-Bello A, Mas-Ponte D, Rosu ME, Bosch E, Calafell F, Comas D.

Eur J Hum Genet. 2018 Dec;26(12):1859-1866. doi: 10.1038/s41431-018-0232-1. Epub 2018 Aug 8.

PMID:
30089826
5.

The genetic landscape of Mediterranean North African populations through complete mtDNA sequences.

Font-Porterias N, Solé-Morata N, Serra-Vidal G, Bekada A, Fadhlaoui-Zid K, Zalloua P, Calafell F, Comas D.

Ann Hum Biol. 2018 Feb;45(1):98-104. doi: 10.1080/03014460.2017.1413133.

PMID:
29382280
6.

The black legend on the Spanish presence in the low countries: Verifying shared beliefs on genetic ancestry.

Larmuseau MHD, Calafell F, Princen SA, Decorte R, Soen V.

Am J Phys Anthropol. 2018 May;166(1):219-227. doi: 10.1002/ajpa.23409. Epub 2018 Jan 11.

PMID:
29327450
7.

Whole Y-chromosome sequences reveal an extremely recent origin of the most common North African paternal lineage E-M183 (M81).

Solé-Morata N, García-Fernández C, Urasin V, Bekada A, Fadhlaoui-Zid K, Zalloua P, Comas D, Calafell F.

Sci Rep. 2017 Nov 21;7(1):15941. doi: 10.1038/s41598-017-16271-y.

8.

Analysis of the R1b-DF27 haplogroup shows that a large fraction of Iberian Y-chromosome lineages originated recently in situ.

Solé-Morata N, Villaescusa P, García-Fernández C, Font-Porterias N, Illescas MJ, Valverde L, Tassi F, Ghirotto S, Férec C, Rouault K, Jiménez-Moreno S, Martínez-Jarreta B, Pinheiro MF, Zarrabeitia MT, Carracedo Á, de Pancorbo MM, Calafell F.

Sci Rep. 2017 Aug 4;7(1):7341. doi: 10.1038/s41598-017-07710-x.

9.

Length and repeat-sequence variation in 58 STRs and 94 SNPs in two Spanish populations.

Casals F, Anglada R, Bonet N, Rasal R, van der Gaag KJ, Hoogenboom J, Solé-Morata N, Comas D, Calafell F.

Forensic Sci Int Genet. 2017 Sep;30:66-70. doi: 10.1016/j.fsigen.2017.06.006. Epub 2017 Jun 16.

PMID:
28633070
10.

The unexpected co-occurrence of GRN and MAPT p.A152T in Basque families: Clinical and pathological characteristics.

Moreno F, Indakoetxea B, Barandiaran M, Caballero MC, Gorostidi A, Calafell F, Gabilondo A, Tainta M, Zulaica M, Martí Massó JF, López de Munain A, Sánchez-Juan P, Lee SE.

PLoS One. 2017 Jun 8;12(6):e0178093. doi: 10.1371/journal.pone.0178093. eCollection 2017.

11.

Y-chromosomal sequences of diverse Indian populations and the ancestry of the Andamanese.

Mondal M, Bergström A, Xue Y, Calafell F, Laayouni H, Casals F, Majumder PP, Tyler-Smith C, Bertranpetit J.

Hum Genet. 2017 May;136(5):499-510. doi: 10.1007/s00439-017-1800-0. Epub 2017 Apr 25.

PMID:
28444560
12.

Satisfaction With Methadone and Opioid Receptor Genes Polymorphisms in Treatment-Refractory Heroin-Dependent Patients.

Pérez de Los Cobos J, Alcaraz S, Siñol N, Arranz MJ, Trujols J, Batlle F, Calafell F, Durán-Sindreu S, Salazar J.

J Clin Psychopharmacol. 2017 Jun;37(3):378-380. doi: 10.1097/JCP.0000000000000698. No abstract available.

PMID:
28338547
13.

Characterization of the Iberian Y chromosome haplogroup R-DF27 in Northern Spain.

Villaescusa P, Illescas MJ, Valverde L, Baeta M, Nuñez C, Martínez-Jarreta B, Zarrabeitia MT, Calafell F, de Pancorbo MM.

Forensic Sci Int Genet. 2017 Mar;27:142-148. doi: 10.1016/j.fsigen.2016.12.013. Epub 2016 Dec 29.

PMID:
28073088
14.

The Y chromosome as the most popular marker in genetic genealogy benefits interdisciplinary research.

Calafell F, Larmuseau MHD.

Hum Genet. 2017 May;136(5):559-573. doi: 10.1007/s00439-016-1740-0. Epub 2016 Nov 5. Review.

PMID:
27817057
15.

An assessment of a massively parallel sequencing approach for the identification of individuals from mass graves of the Spanish Civil War (1936-1939).

Calafell F, Anglada R, Bonet N, González-Ruiz M, Prats-Muñoz G, Rasal R, Lalueza-Fox C, Bertranpetit J, Malgosa A, Casals F.

Electrophoresis. 2016 Oct;37(21):2841-2847. doi: 10.1002/elps.201600180. Epub 2016 Sep 5.

PMID:
27489250
16.

Signatures of Evolutionary Adaptation in Quantitative Trait Loci Influencing Trace Element Homeostasis in Liver.

Engelken J, Espadas G, Mancuso FM, Bonet N, Scherr AL, Jímenez-Álvarez V, Codina-Solà M, Medina-Stacey D, Spataro N, Stoneking M, Calafell F, Sabidó E, Bosch E.

Mol Biol Evol. 2016 Mar;33(3):738-54. doi: 10.1093/molbev/msv267. Epub 2015 Nov 17.

17.

Correction: No Major Host Genetic Risk Factor Contributed to A(H1N1)2009 Influenza Severity.

Garcia-Etxebarria K, Bracho MA, Galán JC, Pumarola T, Castilla J, Ortiz de Lejarazu R, Rodríguez-Dominguez M, Quintela I, Bonet N, Garcia-Garcerà M, Domínguez A, González-Candelas F, Calafell F; CIBERESP Cases; Controls in Pandemic Influenza Working Group.

PLoS One. 2015 Oct 30;10(10):e0141661. doi: 10.1371/journal.pone.0141661. eCollection 2015. No abstract available.

18.

Genetic Heterogeneity in Algerian Human Populations.

Bekada A, Arauna LR, Deba T, Calafell F, Benhamamouch S, Comas D.

PLoS One. 2015 Sep 24;10(9):e0138453. doi: 10.1371/journal.pone.0138453. eCollection 2015.

19.

No Major Host Genetic Risk Factor Contributed to A(H1N1)2009 Influenza Severity.

Garcia-Etxebarria K, Bracho MA, Galán JC, Pumarola T, Castilla J, Ortiz de Lejarazu R, Rodríguez-Dominguez M, Quintela I, Bonet N, Garcia-Garcerà M, Domínguez A, González-Candelas F, Calafell F; CIBERESP Cases and Controls in Pandemic Influenza Working Group.

PLoS One. 2015 Sep 17;10(9):e0135983. doi: 10.1371/journal.pone.0135983. eCollection 2015. Erratum in: PLoS One. 2015;10(10):e0141661.

20.

Combined epigenetic and intraspecific variation of the DRD4 and SERT genes influence novelty seeking behavior in great tit Parus major.

Riyahi S, Sánchez-Delgado M, Calafell F, Monk D, Senar JC.

Epigenetics. 2015;10(6):516-25. doi: 10.1080/15592294.2015.1046027. Epub 2015 May 1.

21.

Y-chromosome diversity in Catalan surname samples: insights into surname origin and frequency.

Solé-Morata N, Bertranpetit J, Comas D, Calafell F.

Eur J Hum Genet. 2015 Nov;23(11):1549-57. doi: 10.1038/ejhg.2015.14. Epub 2015 Feb 18.

22.

Mendelian genes for Parkinson's disease contribute to the sporadic forms of the disease.

Spataro N, Calafell F, Cervera-Carles L, Casals F, Pagonabarraga J, Pascual-Sedano B, Campolongo A, Kulisevsky J, Lleó A, Navarro A, Clarimón J, Bosch E.

Hum Mol Genet. 2015 Apr 1;24(7):2023-34. doi: 10.1093/hmg/ddu616. Epub 2014 Dec 11.

PMID:
25504046
23.

Direct squencing from the minimal number of DNA molecules needed to fill a 454 picotiterplate.

Džunková M, Garcia-Garcerà M, Martínez-Priego L, D'Auria G, Calafell F, Moya A.

PLoS One. 2014 Jun 2;9(6):e97379. doi: 10.1371/journal.pone.0097379. eCollection 2014. Erratum in: PLoS One. 2014;9(7):e102719.

24.

Recent radiation of R-M269 and high Y-STR haplotype resemblance confirmed.

Solé-Morata N, Bertranpetit J, Comas D, Calafell F.

Ann Hum Genet. 2014 Jul;78(4):253-4. doi: 10.1111/ahg.12066. Epub 2014 May 13. No abstract available.

25.

Consistency of metagenomic assignment programs in simulated and real data.

Garcia-Etxebarria K, Garcia-Garcerà M, Calafell F.

BMC Bioinformatics. 2014 Mar 28;15:90. doi: 10.1186/1471-2105-15-90.

26.

A new method for extracting skin microbes allows metagenomic analysis of whole-deep skin.

Garcia-Garcerà M, Garcia-Etxebarria K, Coscollà M, Latorre A, Calafell F.

PLoS One. 2013 Sep 20;8(9):e74914. doi: 10.1371/journal.pone.0074914. eCollection 2013.

27.

Genetic comparison of the head of Henri IV and the presumptive blood from Louis XVI (both Kings of France).

Charlier P, Olalde I, Solé N, Ramírez O, Babelon JP, Galland B, Calafell F, Lalueza-Fox C.

Forensic Sci Int. 2013 Mar 10;226(1-3):38-40. doi: 10.1016/j.forsciint.2012.11.018. Epub 2012 Dec 30.

PMID:
23283403
28.

Y-chromosome analysis in individuals bearing the Basarab name of the first dynasty of Wallachian kings.

Martinez-Cruz B, Ioana M, Calafell F, Arauna LR, Sanz P, Ionescu R, Boengiu S, Kalaydjieva L, Pamjav H, Makukh H, Plantinga T, van der Meer JW, Comas D, Netea MG; Genographic Consortium.

PLoS One. 2012;7(7):e41803. Epub 2012 Jul 25.

29.

Y-chromosome diversity in Native Mexicans reveals continental transition of genetic structure in the Americas.

Sandoval K, Moreno-Estrada A, Mendizabal I, Underhill PA, Lopez-Valenzuela M, Peñaloza-Espinosa R, Lopez-Lopez M, Buentello-Malo L, Avelino H, Calafell F, Comas D.

Am J Phys Anthropol. 2012 Jul;148(3):395-405. doi: 10.1002/ajpa.22062. Epub 2012 May 11.

PMID:
22576278
30.

Staphylococcus prevails in the skin microbiota of long-term immunodeficient mice.

Garcia-Garcerà M, Coscollà M, Garcia-Etxebarria K, Martín-Caballero J, González-Candelas F, Latorre A, Calafell F.

Environ Microbiol. 2012 Aug;14(8):2087-98. doi: 10.1111/j.1462-2920.2012.02756.x. Epub 2012 Apr 24.

PMID:
22524615
31.

Search for genetic association between IgA nephropathy and candidate genes selected by function or by gene mapping at loci IGAN2 and IGAN3.

Bertinetto FE, Calafell F, Roggero S, Chidichimo R, Garino E, Marcuccio C, Coppo R, Scolari F, Frascá GM, Savoldi S, Schena FP, Amoroso A; European IgA Nephropathy Consortium.

Nephrol Dial Transplant. 2012 Jun;27(6):2328-37. doi: 10.1093/ndt/gfr633. Epub 2011 Nov 29.

PMID:
22131235
32.

Recombination networks as genetic markers in a human variation study of the Old World.

Javed A, Melé M, Pybus M, Zalloua P, Haber M, Comas D, Netea MG, Balanovsky O, Balanovska E, Jin L, Yang Y, Arunkumar G, Pitchappan R, Bertranpetit J, Calafell F, Parida L; Genographic Consortium.

Hum Genet. 2012 Apr;131(4):601-13. doi: 10.1007/s00439-011-1104-8. Epub 2011 Oct 18.

PMID:
22006219
33.

Fragmentation of contaminant and endogenous DNA in ancient samples determined by shotgun sequencing; prospects for human palaeogenomics.

García-Garcerà M, Gigli E, Sanchez-Quinto F, Ramirez O, Calafell F, Civit S, Lalueza-Fox C.

PLoS One. 2011;6(8):e24161. doi: 10.1371/journal.pone.0024161. Epub 2011 Aug 31.

34.

Recombination gives a new insight in the effective population size and the history of the old world human populations.

Melé M, Javed A, Pybus M, Zalloua P, Haber M, Comas D, Netea MG, Balanovsky O, Balanovska E, Jin L, Yang Y, Pitchappan RM, Arunkumar G, Parida L, Calafell F, Bertranpetit J; Genographic Consortium.

Mol Biol Evol. 2012 Jan;29(1):25-30. doi: 10.1093/molbev/msr213. Epub 2011 Sep 1.

PMID:
21890475
35.

Surname and Y chromosome in Southern Europe: a case study with Colom/Colombo.

Martínez-González LJ, Martínez-Espín E, Álvarez JC, Albardaner F, Rickards O, Martínez-Labarga C, Calafell F, Lorente JA.

Eur J Hum Genet. 2012 Feb;20(2):211-6. doi: 10.1038/ejhg.2011.162. Epub 2011 Aug 17.

36.

IRiS: construction of ARG networks at genomic scales.

Javed A, Pybus M, Melé M, Utro F, Bertranpetit J, Calafell F, Parida L.

Bioinformatics. 2011 Sep 1;27(17):2448-50. doi: 10.1093/bioinformatics/btr423. Epub 2011 Jul 15.

PMID:
21765095
37.

[Conclusions of the workshop "Results and lessons learned during the pandemic flu (H1N1) 2009 from the research and the public health surveillance"].

Godoy P, Pumarola T, Sierra MJ, Godoy P, Torner N, Calafell F, Domínguez À, Castilla J, Nebot M, Vargas H, Benavides FG, Alonso J, Larrauri A, Tello O, Camps N, Cabezas C, Caylà J, Rodés A, Delclos J.

Rev Esp Salud Publica. 2011 Jan-Feb;85(1):121-2. doi: 10.1590/S1135-57272011000100015. Spanish. No abstract available.

38.

Genetic adaptation of the antibacterial human innate immunity network.

Casals F, Sikora M, Laayouni H, Montanucci L, Muntasell A, Lazarus R, Calafell F, Awadalla P, Netea MG, Bertranpetit J.

BMC Evol Biol. 2011 Jul 11;11:202. doi: 10.1186/1471-2148-11-202.

39.

Similarity in recombination rate estimates highly correlates with genetic differentiation in humans.

Laayouni H, Montanucci L, Sikora M, Melé M, Dall'Olio GM, Lorente-Galdos B, McGee KM, Graffelman J, Awadalla P, Bosch E, Comas D, Navarro A, Calafell F, Casals F, Bertranpetit J.

PLoS One. 2011 Mar 28;6(3):e17913. doi: 10.1371/journal.pone.0017913.

40.

Mitochondrial DNA structure in North Africa reveals a genetic discontinuity in the Nile Valley.

Fadhlaoui-Zid K, Rodríguez-Botigué L, Naoui N, Benammar-Elgaaied A, Calafell F, Comas D.

Am J Phys Anthropol. 2011 May;145(1):107-17. doi: 10.1002/ajpa.21472. Epub 2011 Feb 10.

PMID:
21312180
41.

Reconstructing the Indian origin and dispersal of the European Roma: a maternal genetic perspective.

Mendizabal I, Valente C, Gusmão A, Alves C, Gomes V, Goios A, Parson W, Calafell F, Alvarez L, Amorim A, Gusmão L, Comas D, Prata MJ.

PLoS One. 2011 Jan 10;6(1):e15988. doi: 10.1371/journal.pone.0015988.

42.

Recent human evolution has shaped geographical differences in susceptibility to disease.

Marigorta UM, Lao O, Casals F, Calafell F, Morcillo-Suárez C, Faria R, Bosch E, Serra F, Bertranpetit J, Dopazo H, Navarro A.

BMC Genomics. 2011 Jan 24;12:55. doi: 10.1186/1471-2164-12-55.

43.

A new method to reconstruct recombination events at a genomic scale.

Melé M, Javed A, Pybus M, Calafell F, Parida L, Bertranpetit J; Genographic Consortium Members.

PLoS Comput Biol. 2010 Nov 24;6(11):e1001010. doi: 10.1371/journal.pcbi.1001010.

44.

Insights into the demographic history of African Pygmies from complete mitochondrial genomes.

Batini C, Lopes J, Behar DM, Calafell F, Jorde LB, van der Veen L, Quintana-Murci L, Spedini G, Destro-Bisol G, Comas D.

Mol Biol Evol. 2011 Feb;28(2):1099-110. doi: 10.1093/molbev/msq294. Epub 2010 Nov 1.

PMID:
21041797
45.

Genetic analysis of the presumptive blood from Louis XVI, King of France.

Lalueza-Fox C, Gigli E, Bini C, Calafell F, Luiselli D, Pelotti S, Pettener D.

Forensic Sci Int Genet. 2011 Nov;5(5):459-63. doi: 10.1016/j.fsigen.2010.09.007. Epub 2010 Oct 10.

PMID:
20940110
46.

African signatures of recent positive selection in human FOXI1.

Moreno-Estrada A, Aparicio-Prat E, Sikora M, Engelken J, Ramírez-Soriano A, Calafell F, Bosch E.

BMC Evol Biol. 2010 Sep 1;10:267. doi: 10.1186/1471-2148-10-267.

47.

A genomic analysis identifies a novel component in the genetic structure of sub-Saharan African populations.

Sikora M, Laayouni H, Calafell F, Comas D, Bertranpetit J.

Eur J Hum Genet. 2011 Jan;19(1):84-8. doi: 10.1038/ejhg.2010.141. Epub 2010 Aug 25.

48.

A genome-wide survey does not show the genetic distinctiveness of Basques.

Laayouni H, Calafell F, Bertranpetit J.

Hum Genet. 2010 Apr;127(4):455-8. doi: 10.1007/s00439-010-0798-3. Epub 2010 Feb 16.

PMID:
20157828
49.

Sequence variation and genetic evolution at the human F12 locus: mapping quantitative trait nucleotides that influence FXII plasma levels.

Calafell F, Almasy L, Sabater-Lleal M, Buil A, Mordillo C, Ramírez-Soriano A, Sikora M, Souto JC, Blangero J, Fontcuberta J, Soria JM.

Hum Mol Genet. 2010 Feb 1;19(3):517-25. doi: 10.1093/hmg/ddp517. Epub 2009 Nov 23.

50.

Decay of linkage disequilibrium within genes across HGDP-CEPH human samples: most population isolates do not show increased LD.

Bosch E, Laayouni H, Morcillo-Suarez C, Casals F, Moreno-Estrada A, Ferrer-Admetlla A, Gardner M, Rosa A, Navarro A, Comas D, Graffelman J, Calafell F, Bertranpetit J.

BMC Genomics. 2009 Jul 28;10:338. doi: 10.1186/1471-2164-10-338.

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