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Tacrolimus trough monitoring guided by mass spectrometry without accounting for assay differences is associated with acute kidney injury in lung transplant recipients.

Kolaitis NA, Calabrese DR, Ahearn P, Venado A, Florez R, Lei HL, Isaak K, Henricksen E, Martinez E, Chong T, Shah RJ, Leard LE, Kleinhenz ME, Golden J, De Marco T, Greenland JR, Kukreja J, Hays SR, Blanc PD, Singer JP.

Am J Health Syst Pharm. 2019 Nov 7. pii: zxz243. doi: 10.1093/ajhp/zxz243. [Epub ahead of print]


Long-Term Treatment Effect and Predictability of Spinopelvic Alignment after Surgical Correction of Adult Spine Deformity (ASD) with Patient-Specific Spine Rods (PSSR).

Kleck C, Calabrese D, Reeves BJ, Cain CMJ, Patel VV, Noshchenko A, Burger EL.

Spine (Phila Pa 1976). 2019 Oct 15. doi: 10.1097/BRS.0000000000003290. [Epub ahead of print]


Dectin-1 genetic deficiency predicts chronic lung allograft dysfunction and death.

Calabrese DR, Wang P, Chong T, Hoover J, Singer JP, Torgerson D, Hays SR, Golden JA, Kukreja J, Dugger D, Christie JD; LTOG investigators, Greenland JR.

JCI Insight. 2019 Nov 14;4(22). pii: 133083. doi: 10.1172/jci.insight.133083.


Clinical Practice Guidelines for Childbearing Female Candidates for Bariatric Surgery, Pregnancy, and Post-partum Management After Bariatric Surgery.

Ciangura C, Coupaye M, Deruelle P, Gascoin G, Calabrese D, Cosson E, Ducarme G, Gaborit B, Lelièvre B, Mandelbrot L, Petrucciani N, Quilliot D, Ritz P, Robin G, Sallé A, Gugenheim J, Nizard J; BARIA-MAT Group.

Obes Surg. 2019 Nov;29(11):3722-3734. doi: 10.1007/s11695-019-04093-y. Review.


Liver biopsy derived induced pluripotent stem cells provide unlimited supply for the generation of hepatocyte-like cells.

Calabrese D, Roma G, Bergling S, Carbone W, Mele V, Nuciforo S, Fofana I, Campana B, Szkolnicka D, Hay DC, Tchorz J, Bouwmeester T, Wieland S, Heim MH.

PLoS One. 2019 Aug 29;14(8):e0221762. doi: 10.1371/journal.pone.0221762. eCollection 2019.


Comparison of Repeat Sleeve Gastrectomy and Roux-en-Y Gastric Bypass in Case of Weight Loss Failure After Sleeve Gastrectomy.

Antonopulos C, Rebibo L, Calabrese D, Ribeiro-Parenti L, Arapis K, Dhahri A, Coupaye M, Hansel B, Marmuse JP, Regimbeau JM, Msika S.

Obes Surg. 2019 Aug 6. doi: 10.1007/s11695-019-04123-9. [Epub ahead of print]


Hepatocellular Carcinoma Xenografts Established From Needle Biopsies Preserve the Characteristics of the Originating Tumors.

Blumer T, Fofana I, Matter MS, Wang X, Montazeri H, Calabrese D, Coto-Llerena M, Boldanova T, Nuciforo S, Kancherla V, Tornillo L, Piscuoglio S, Wieland S, Terracciano LM, Ng CKY, Heim MH.

Hepatol Commun. 2019 May 6;3(7):971-986. doi: 10.1002/hep4.1365. eCollection 2019 Jul.


Ligand-observed NMR techniques to probe RNA-small molecule interactions.

Calabrese DR, Connelly CM, Schneekloth JS Jr.

Methods Enzymol. 2019;623:131-149. doi: 10.1016/bs.mie.2019.05.030. Epub 2019 Jun 6.


Evidence for ligandable sites in structured RNA throughout the Protein Data Bank.

Hewitt WM, Calabrese DR, Schneekloth JS Jr.

Bioorg Med Chem. 2019 Jun 1;27(11):2253-2260. doi: 10.1016/j.bmc.2019.04.010. Epub 2019 Apr 6.


Effectiveness of Ursodeoxycholic Acid in the Prevention of Cholelithiasis After Sleeve Gastrectomy.

Coupaye M, Calabrese D, Sami O, Siauve N, Ledoux S.

Obes Surg. 2019 Aug;29(8):2464-2469. doi: 10.1007/s11695-019-03862-z.


Gastric bypass specifically impairs liver parameters as compared with sleeve gastrectomy, independently of evolution of metabolic disorders.

Ledoux S, Sami O, Calabrese D, Le Gall M, Flamant M, Coupaye M.

Surg Obes Relat Dis. 2019 Feb;15(2):220-226. doi: 10.1016/j.soard.2018.10.035. Epub 2018 Nov 15.


At the Bottom of Thomas Bayes' Tea Cup: Practical Applications of Lung Transplant Immunophenotyping.

Calabrese DR.

Transplantation. 2019 Aug;103(8):1538-1539. doi: 10.1097/TP.0000000000002546. No abstract available.


Increased interpremolar development with self-ligating orthodontics. A prospective randomized clinical trial.

Mateu ME, Benítez-Rogé S, Iglesias M, Calabrese D, Lumi M, Solla M, Hecht P, Folco A.

Acta Odontol Latinoam. 2018 Aug;31(2):104-109.


Natural killer cells in lung transplantation.

Calabrese DR, Lanier LL, Greenland JR.

Thorax. 2019 Apr;74(4):397-404. doi: 10.1136/thoraxjnl-2018-212345. Epub 2018 Oct 31. Review.


Imatinib reduces non-alcoholic fatty liver disease in obese mice by targeting inflammatory and lipogenic pathways in macrophages and liver.

AlAsfoor S, Rohm TV, Bosch AJT, Dervos T, Calabrese D, Matter MS, Weber A, Cavelti-Weder C.

Sci Rep. 2018 Oct 17;8(1):15331. doi: 10.1038/s41598-018-32853-w.


Chemical and structural studies provide a mechanistic basis for recognition of the MYC G-quadruplex.

Calabrese DR, Chen X, Leon EC, Gaikwad SM, Phyo Z, Hewitt WM, Alden S, Hilimire TA, He F, Michalowski AM, Simmons JK, Saunders LB, Zhang S, Connors D, Walters KJ, Mock BA, Schneekloth JS Jr.

Nat Commun. 2018 Oct 12;9(1):4229. doi: 10.1038/s41467-018-06315-w.


The Italian neuromuscular registry: a coordinated platform where patient organizations and clinicians collaborate for data collection and multiple usage.

Ambrosini A, Calabrese D, Avato FM, Catania F, Cavaletti G, Pera MC, Toscano A, Vita G, Monaco L, Pareyson D.

Orphanet J Rare Dis. 2018 Oct 4;13(1):176. doi: 10.1186/s13023-018-0918-z.


NKG2C Natural Killer Cells in Bronchoalveolar Lavage Are Associated With Cytomegalovirus Viremia and Poor Outcomes in Lung Allograft Recipients.

Calabrese DR, Chong T, Wang A, Singer JP, Gottschall M, Hays SR, Golden JA, Kukreja J, Lanier LL, Tang Q, Greenland JR.

Transplantation. 2019 Mar;103(3):493-501. doi: 10.1097/TP.0000000000002450.


Impact of Roux-en-Y gastric bypass and sleeve gastrectomy on fetal growth and relationship with maternal nutritional status.

Coupaye M, Legardeur H, Sami O, Calabrese D, Mandelbrot L, Ledoux S.

Surg Obes Relat Dis. 2018 Oct;14(10):1488-1494. doi: 10.1016/j.soard.2018.07.014. Epub 2018 Jul 20.


Organoid Models of Human Liver Cancers Derived from Tumor Needle Biopsies.

Nuciforo S, Fofana I, Matter MS, Blumer T, Calabrese D, Boldanova T, Piscuoglio S, Wieland S, Ringnalda F, Schwank G, Terracciano LM, Ng CKY, Heim MH.

Cell Rep. 2018 Jul 31;24(5):1363-1376. doi: 10.1016/j.celrep.2018.07.001.


Genotypes associated with tacrolimus pharmacokinetics impact clinical outcomes in lung transplant recipients.

Calabrese DR, Florez R, Dewey K, Hui C, Torgerson D, Chong T, Faust H, Rajalingam R, Hays SR, Golden JA, Kukreja J, Singer JP, Greenland JR.

Clin Transplant. 2018 Aug;32(8):e13332. doi: 10.1111/ctr.13332. Epub 2018 Jul 4.


Method for evaluation of transverse dimension in self-ligating orthodontic treatment. A comparative study.

Folco A, Benítez-Rogé S, Calabrese D, Iglesias M, Lumi M, Hetch P, Mateu ME.

Acta Odontol Latinoam. 2017 Dec;30(3):124-128.


Characterization of clinically used oral antiseptics as quadruplex-binding ligands.

Calabrese DR, Zlotkowski K, Alden S, Hewitt WM, Connelly CM, Wilson RM, Gaikwad S, Chen L, Guha R, Thomas CJ, Mock BA, Schneekloth JS Jr.

Nucleic Acids Res. 2018 Apr 6;46(6):2722-2732. doi: 10.1093/nar/gky084.


Efficacy of Forced-Air Warming to Prevent Perioperative Hypothermia in Morbidly-Obese Versus Non-obese Patients.

Okoué R, Calabrese D, Nzé P, Msika S, Keita H.

Obes Surg. 2018 Jul;28(7):1955-1959. doi: 10.1007/s11695-017-3108-5.


In vivo analysis at the cellular level reveals similar steatosis induction in both hepatitis C virus genotype 1 and 3 infections.

Campana B, Calabrese D, Matter MS, Terracciano LM, Wieland SF, Heim MH.

J Viral Hepat. 2018 Mar;25(3):262-271. doi: 10.1111/jvh.12816. Epub 2017 Nov 20.


Gastroesophageal Reflux After Sleeve Gastrectomy: a Prospective Mechanistic Study.

Coupaye M, Gorbatchef C, Calabrese D, Sami O, Msika S, Coffin B, Ledoux S.

Obes Surg. 2018 Mar;28(3):838-845. doi: 10.1007/s11695-017-2942-9.


Laparoscopy in the second and third trimesters of pregnancy for abdominal surgical emergencies.

Guterman S, Mandelbrot L, Keita H, Bretagnol F, Calabrese D, Msika S.

J Gynecol Obstet Hum Reprod. 2017 May;46(5):417-422. doi: 10.1016/j.jogoh.2017.03.008. Epub 2017 Mar 31.


HLA Mismatching Favoring Host-Versus-Graft NK Cell Activity Via KIR3DL1 Is Associated With Improved Outcomes Following Lung Transplantation.

Greenland JR, Sun H, Calabrese D, Chong T, Singer JP, Kukreja J, Hays SR, Golden JA, Caughey GH, Venstrom JM, Rajalingam R.

Am J Transplant. 2017 Aug;17(8):2192-2199. doi: 10.1111/ajt.14295. Epub 2017 May 11.


The ENTPD1 promoter polymorphism -860 A > G (rs3814159) is associated with increased gene transcription, protein expression, CD39/NTPDase1 enzymatic activity, and thromboembolism risk.

Maloney JP, Branchford BR, Brodsky GL, Cosmic MS, Calabrese DW, Aquilante CL, Maloney KW, Gonzalez JR, Zhang W, Moreau KL, Wiggins KL, Smith NL, Broeckel U, Di Paola J.

FASEB J. 2017 Jul;31(7):2771-2784. doi: 10.1096/fj.201600344R. Epub 2017 Mar 16.


Automated microfluidic sorting of mammalian cells labeled with magnetic microparticles for those that efficiently express and secrete a protein of interest.

Droz X, Harraghy N, Lançon E, Le Fourn V, Calabrese D, Colombet T, Liechti P, Rida A, Girod PA, Mermod N.

Biotechnol Bioeng. 2017 Aug;114(8):1791-1802. doi: 10.1002/bit.26270. Epub 2017 Jun 6.


miR-135a-5p-mediated downregulation of protein tyrosine phosphatase receptor delta is a candidate driver of HCV-associated hepatocarcinogenesis.

Van Renne N, Roca Suarez AA, Duong FHT, Gondeau C, Calabrese D, Fontaine N, Ababsa A, Bandiera S, Croonenborghs T, Pochet N, De Blasi V, Pessaux P, Piardi T, Sommacale D, Ono A, Chayama K, Fujita M, Nakagawa H, Hoshida Y, Zeisel MB, Heim MH, Baumert TF, Lupberger J.

Gut. 2018 May;67(5):953-962. doi: 10.1136/gutjnl-2016-312270. Epub 2017 Feb 3.


Evaluation of incidence of cholelithiasis after bariatric surgery in subjects treated or not treated with ursodeoxycholic acid.

Coupaye M, Calabrese D, Sami O, Msika S, Ledoux S.

Surg Obes Relat Dis. 2017 Apr;13(4):681-685. doi: 10.1016/j.soard.2016.11.022. Epub 2016 Dec 2.


Liver damage and senescence increases in patients developing hepatocellular carcinoma.

Rey S, Quintavalle C, Burmeister K, Calabrese D, Schlageter M, Quagliata L, Cathomas G, Diebold J, Molinolo A, Heim MH, Terracciano LM, Matter MS.

J Gastroenterol Hepatol. 2017 Aug;32(8):1480-1486. doi: 10.1111/jgh.13717.


Highly Sensitive Detection of HBV RNA in Liver Tissue by In Situ Hybridization.

Calabrese D, Wieland SF.

Methods Mol Biol. 2017;1540:119-134.


Induction of hypoxia and necrosis in multicellular tumor spheroids is associated with resistance to chemotherapy treatment.

Däster S, Amatruda N, Calabrese D, Ivanek R, Turrini E, Droeser RA, Zajac P, Fimognari C, Spagnoli GC, Iezzi G, Mele V, Muraro MG.

Oncotarget. 2017 Jan 3;8(1):1725-1736. doi: 10.18632/oncotarget.13857.


Relevance of Self-reported Behavioral Changes Before Bariatric Surgery to Predict Success After Surgery.

Ledoux S, Sami O, Breuil MC, Delapierre M, Calabrese D, Msika S, Coupaye M.

Obes Surg. 2017 Jun;27(6):1453-1459. doi: 10.1007/s11695-016-2496-2.


HMGA1 Expression in Human Hepatocellular Carcinoma Correlates with Poor Prognosis and Promotes Tumor Growth and Migration in in vitro Models.

Andreozzi M, Quintavalle C, Benz D, Quagliata L, Matter M, Calabrese D, Tosti N, Ruiz C, Trapani F, Tornillo L, Fusco A, Heim MH, Ng CK, Pallante P, Terracciano LM, Piscuoglio S.

Neoplasia. 2016 Dec;18(12):724-731. doi: 10.1016/j.neo.2016.10.002. Epub 2016 Nov 14.


Corrigendum: The RSPO-LGR4/5-ZNRF3/RNF43 module controls liver zonation and size.

Planas-Paz L, Orsini V, Boulter L, Calabrese D, Pikiolek M, Nigsch F, Xie Y, Roma G, Donovan A, Marti P, Beckmann N, Dill MT, Carbone W, Bergling S, Isken A, Mueller M, Kinzel B, Yang Y, Mao X, Nicholson TB, Zamponi R, Capodieci P, Valdez R, Rivera D, Loew A, Ukomadu C, Terracciano LM, Bouwmeester T, Cong F, Heim MH, Forbes SJ, Ruffner H, Tchorz JS.

Nat Cell Biol. 2016 Oct 27;18(11):1260. doi: 10.1038/ncb3428. No abstract available.


Determinants of Evolution of Glomerular Filtration Rate After Bariatric Surgery: a 1-Year Observational Study.

Coupaye M, Flamant M, Sami O, Calabrese D, Msika S, Bogard C, Vidal-Petiot E, Ledoux S.

Obes Surg. 2017 Jan;27(1):126-133. doi: 10.1007/s11695-016-2260-7.


Erratum to: Monitoring effectiveness and safety of Tafamidis in transthyretin amyloidosis in Italy: a longitudinal multicenter study in a non-endemic area.

Cortese A, Vita G, Luigetti M, Russo M, Bisogni G, Sabatelli M, Manganelli F, Santoro L, Cavallaro T, Fabrizi GM, Schenone A, Grandis M, Gemelli C, Mauro A, Pradotto LG, Gentile L, Stancanelli C, Lozza A, Perlini S, Piscosquito G, Calabrese D, Mazzeo A, Obici L, Pareyson D.

J Neurol. 2016 May;263(5):925-926. doi: 10.1007/s00415-016-8116-1. No abstract available.


The RSPO-LGR4/5-ZNRF3/RNF43 module controls liver zonation and size.

Planas-Paz L, Orsini V, Boulter L, Calabrese D, Pikiolek M, Nigsch F, Xie Y, Roma G, Donovan A, Marti P, Beckmann N, Dill MT, Carbone W, Bergling S, Isken A, Mueller M, Kinzel B, Yang Y, Mao X, Nicholson TB, Zamponi R, Capodieci P, Valdez R, Rivera D, Loew A, Ukomadu C, Terracciano LM, Bouwmeester T, Cong F, Heim MH, Forbes SJ, Ruffner H, Tchorz JS.

Nat Cell Biol. 2016 May;18(5):467-79. doi: 10.1038/ncb3337. Epub 2016 Apr 18. Erratum in: Nat Cell Biol. 2016 Oct 27;18(11):1260.


Reply letter to: HIPEC and nephrotoxicity: A cisplatin induced effect?

Bouhadjari N, Gabato W, Calabrese D, Msika S, Keïta H.

Eur J Surg Oncol. 2016 Jun;42(6):907-8. doi: 10.1016/j.ejso.2016.02.243. Epub 2016 Mar 4. No abstract available.


Monitoring effectiveness and safety of Tafamidis in transthyretin amyloidosis in Italy: a longitudinal multicenter study in a non-endemic area.

Cortese A, Vita G, Luigetti M, Russo M, Bisogni G, Sabatelli M, Manganelli F, Santoro L, Cavallaro T, Fabrizi GM, Schenone A, Grandis M, Gemelli C, Mauro A, Pradotto LG, Gentile L, Stancanelli C, Lozza A, Perlini S, Piscosquito G, Calabrese D, Mazzeo A, Obici L, Pareyson D.

J Neurol. 2016 May;263(5):916-924. doi: 10.1007/s00415-016-8064-9. Epub 2016 Mar 16. Erratum in: J Neurol. 2016 May;263(5):925-926.


Small Molecule Microarrays Enable the Identification of a Selective, Quadruplex-Binding Inhibitor of MYC Expression.

Felsenstein KM, Saunders LB, Simmons JK, Leon E, Calabrese DR, Zhang S, Michalowski A, Gareiss P, Mock BA, Schneekloth JS Jr.

ACS Chem Biol. 2016 Jan 15;11(1):139-48. doi: 10.1021/acschembio.5b00577. Epub 2015 Nov 6.


VEGF dose regulates vascular stabilization through Semaphorin3A and the Neuropilin-1+ monocyte/TGF-β1 paracrine axis.

Groppa E, Brkic S, Bovo E, Reginato S, Sacchi V, Di Maggio N, Muraro MG, Calabrese D, Heberer M, Gianni-Barrera R, Banfi A.

EMBO Mol Med. 2015 Oct;7(10):1366-84. doi: 10.15252/emmm.201405003.


Hyperthermic intraperitoneal chemotherapy with cisplatin: Amifostine prevents acute severe renal impairment.

Bouhadjari N, Gabato W, Calabrese D, Msika S, Keita H.

Eur J Surg Oncol. 2016 Feb;42(2):219-23. doi: 10.1016/j.ejso.2015.07.016. Epub 2015 Aug 5.


Responsiveness of clinical outcome measures in Charcot-Marie-Tooth disease.

Piscosquito G, Reilly MM, Schenone A, Fabrizi GM, Cavallaro T, Santoro L, Manganelli F, Vita G, Quattrone A, Padua L, Gemignani F, Visioli F, Laurà M, Calabrese D, Hughes RA, Radice D, Solari A, Pareyson D; CMT-TRIAAL Group; CMT-TRAUK Group.

Eur J Neurol. 2015 Dec;22(12):1556-63. doi: 10.1111/ene.12783. Epub 2015 Jul 31.


Epigenetic regulatory elements: Recent advances in understanding their mode of action and use for recombinant protein production in mammalian cells.

Harraghy N, Calabrese D, Fisch I, Girod PA, LeFourn V, Regamey A, Mermod N.

Biotechnol J. 2015 Jul;10(7):967-78. doi: 10.1002/biot.201400649. Epub 2015 Jun 23. Review.


The influence of somatosensory and muscular deficits on postural stabilization: Insights from an instrumented analysis of subjects affected by different types of Charcot-Marie-Tooth disease.

Lencioni T, Piscosquito G, Rabuffetti M, Bovi G, Calabrese D, Aiello A, Di Sipio E, Padua L, Diverio M, Pareyson D, Ferrarin M.

Neuromuscul Disord. 2015 Aug;25(8):640-5. doi: 10.1016/j.nmd.2015.05.003. Epub 2015 May 11.


Clearance of persistent hepatitis C virus infection in humanized mice using a claudin-1-targeting monoclonal antibody.

Mailly L, Xiao F, Lupberger J, Wilson GK, Aubert P, Duong FHT, Calabrese D, Leboeuf C, Fofana I, Thumann C, Bandiera S, Lütgehetmann M, Volz T, Davis C, Harris HJ, Mee CJ, Girardi E, Chane-Woon-Ming B, Ericsson M, Fletcher N, Bartenschlager R, Pessaux P, Vercauteren K, Meuleman P, Villa P, Kaderali L, Pfeffer S, Heim MH, Neunlist M, Zeisel MB, Dandri M, McKeating JA, Robinet E, Baumert TF.

Nat Biotechnol. 2015 May;33(5):549-554. doi: 10.1038/nbt.3179. Epub 2015 Mar 23.

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