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Items: 39

1.

Rouse model with transient intramolecular contacts on a timescale of seconds recapitulates folding and fluctuation of yeast chromosomes.

Socol M, Wang R, Jost D, Carrivain P, Vaillant C, Le Cam E, Dahirel V, Normand C, Bystricky K, Victor JM, Gadal O, Bancaud A.

Nucleic Acids Res. 2019 Jul 9;47(12):6195-6207. doi: 10.1093/nar/gkz374.

2.

Challenges and guidelines toward 4D nucleome data and model standards.

Marti-Renom MA, Almouzni G, Bickmore WA, Bystricky K, Cavalli G, Fraser P, Gasser SM, Giorgetti L, Heard E, Nicodemi M, Nollmann M, Orozco M, Pombo A, Torres-Padilla ME.

Nat Genet. 2018 Oct;50(10):1352-1358. doi: 10.1038/s41588-018-0236-3. Epub 2018 Sep 27. Review.

PMID:
30262815
3.

In Vivo Labelling of Adenovirus DNA Identifies Chromatin Anchoring and Biphasic Genome Replication.

Komatsu T, Quentin-Froignant C, Carlon-Andres I, Lagadec F, Rayne F, Ragues J, Kehlenbach RH, Zhang W, Ehrhardt A, Bystricky K, Morin R, Lagarde JM, Gallardo F, Wodrich H.

J Virol. 2018 Aug 29;92(18). pii: e00795-18. doi: 10.1128/JVI.00795-18. Print 2018 Sep 15.

4.

Real-Time Visualization and Quantification of Human Cytomegalovirus Replication in Living Cells Using the ANCHOR DNA Labeling Technology.

Mariamé B, Kappler-Gratias S, Kappler M, Balor S, Gallardo F, Bystricky K.

J Virol. 2018 Aug 29;92(18). pii: e00571-18. doi: 10.1128/JVI.00571-18. Print 2018 Sep 15.

5.

Formation of correlated chromatin domains at nanoscale dynamic resolution during transcription.

Shaban HA, Barth R, Bystricky K.

Nucleic Acids Res. 2018 Jul 27;46(13):e77. doi: 10.1093/nar/gky269.

6.

3D FISH to analyse gene domain-specific chromatin re-modeling in human cancer cell lines.

Kocanova S, Goiffon I, Bystricky K.

Methods. 2018 Jun 1;142:3-15. doi: 10.1016/j.ymeth.2018.02.013. Epub 2018 Mar 1.

PMID:
29501423
7.

Activation of the Notch Signaling Pathway In Vivo Elicits Changes in CSL Nuclear Dynamics.

Gomez-Lamarca MJ, Falo-Sanjuan J, Stojnic R, Abdul Rehman S, Muresan L, Jones ML, Pillidge Z, Cerda-Moya G, Yuan Z, Baloul S, Valenti P, Bystricky K, Payre F, O'Holleran K, Kovall R, Bray SJ.

Dev Cell. 2018 Mar 12;44(5):611-623.e7. doi: 10.1016/j.devcel.2018.01.020. Epub 2018 Feb 22.

8.

Real-Time Imaging of a Single Gene Reveals Transcription-Initiated Local Confinement.

Germier T, Kocanova S, Walther N, Bancaud A, Shaban HA, Sellou H, Politi AZ, Ellenberg J, Gallardo F, Bystricky K.

Biophys J. 2017 Oct 3;113(7):1383-1394. doi: 10.1016/j.bpj.2017.08.014.

9.

Histone deacetylase 9 regulates breast cancer cell proliferation and the response to histone deacetylase inhibitors.

Lapierre M, Linares A, Dalvai M, Duraffourd C, Bonnet S, Boulahtouf A, Rodriguez C, Jalaguier S, Assou S, Orsetti B, Balaguer P, Maudelonde T, Blache P, Bystricky K, Boulle N, Cavaillès V.

Oncotarget. 2016 Apr 12;7(15):19693-708. doi: 10.18632/oncotarget.7564.

10.

Molecular and Biochemical Analysis of the Estrogenic and Proliferative Properties of Vitamin E Compounds.

Khallouki F, de Medina P, Caze-Subra S, Bystricky K, Balaguer P, Poirot M, Silvente-Poirot S.

Front Oncol. 2016 Jan 5;5:287. doi: 10.3389/fonc.2015.00287. eCollection 2015.

11.

The Conformation of Yeast Chromosome III Is Mating Type Dependent and Controlled by the Recombination Enhancer.

Belton JM, Lajoie BR, Audibert S, Cantaloube S, Lassadi I, Goiffon I, Baù D, Marti-Renom MA, Bystricky K, Dekker J.

Cell Rep. 2015 Dec 1;13(9):1855-67. doi: 10.1016/j.celrep.2015.10.063. Epub 2015 Nov 19.

12.

Transcriptional Pathways in cPGI2-Induced Adipocyte Progenitor Activation for Browning.

Bayindir I, Babaeikelishomi R, Kocanova S, Sousa IS, Lerch S, Hardt O, Wild S, Bosio A, Bystricky K, Herzig S, Vegiopoulos A.

Front Endocrinol (Lausanne). 2015 Aug 17;6:129. doi: 10.3389/fendo.2015.00129. eCollection 2015.

13.

Chromosome dynamics and folding in eukaryotes: Insights from live cell microscopy.

Bystricky K.

FEBS Lett. 2015 Oct 7;589(20 Pt A):3014-22. doi: 10.1016/j.febslet.2015.07.012. Epub 2015 Jul 17. Review.

14.

Differential chromosome conformations as hallmarks of cellular identity revealed by mathematical polymer modeling.

Lassadi I, Kamgoué A, Goiffon I, Tanguy-le-Gac N, Bystricky K.

PLoS Comput Biol. 2015 Jun 1;11(6):e1004306. doi: 10.1371/journal.pcbi.1004306. eCollection 2015 Jun.

15.

HDAC inhibition does not induce estrogen receptor in human triple-negative breast cancer cell lines and patient-derived xenografts.

de Cremoux P, Dalvai M, N'Doye O, Moutahir F, Rolland G, Chouchane-Mlik O, Assayag F, Lehmann-Che J, Kraus-Berthie L, Nicolas A, Lockhart BP, Marangoni E, de Thé H, Depil S, Bystricky K, Decaudin D.

Breast Cancer Res Treat. 2015 Jan;149(1):81-9. doi: 10.1007/s10549-014-3233-y. Epub 2014 Dec 12.

PMID:
25503779
16.

Reptin and Pontin oligomerization and activity are modulated through histone H3 N-terminal tail interaction.

Queval R, Papin C, Dalvai M, Bystricky K, Humbert O.

J Biol Chem. 2014 Dec 5;289(49):33999-4012. doi: 10.1074/jbc.M114.576785. Epub 2014 Oct 21.

17.

Increased macroH2A1.1 expression correlates with poor survival of triple-negative breast cancer patients.

Lavigne AC, Castells M, Mermet J, Kocanova S, Dalvai M, Bystricky K.

PLoS One. 2014 Jun 9;9(6):e98930. doi: 10.1371/journal.pone.0098930. eCollection 2014.

18.

DNA dynamics during early double-strand break processing revealed by non-intrusive imaging of living cells.

Saad H, Gallardo F, Dalvai M, Tanguy-le-Gac N, Lane D, Bystricky K.

PLoS Genet. 2014 Mar 13;10(3):e1004187. doi: 10.1371/journal.pgen.1004187. eCollection 2014 Mar.

19.

High-throughput chromatin motion tracking in living yeast reveals the flexibility of the fiber throughout the genome.

Hajjoul H, Mathon J, Ranchon H, Goiffon I, Mozziconacci J, Albert B, Carrivain P, Victor JM, Gadal O, Bystricky K, Bancaud A.

Genome Res. 2013 Nov;23(11):1829-38. doi: 10.1101/gr.157008.113. Epub 2013 Sep 27.

20.

TIP48/Reptin and H2A.Z requirement for initiating chromatin remodeling in estrogen-activated transcription.

Dalvai M, Fleury L, Bellucci L, Kocanova S, Bystricky K.

PLoS Genet. 2013 Apr;9(4):e1003387. doi: 10.1371/journal.pgen.1003387. Epub 2013 Apr 18.

21.

Activation of p21 by HDAC inhibitors requires acetylation of H2A.Z.

Bellucci L, Dalvai M, Kocanova S, Moutahir F, Bystricky K.

PLoS One. 2013;8(1):e54102. doi: 10.1371/journal.pone.0054102. Epub 2013 Jan 18.

22.

H2A.Z-dependent crosstalk between enhancer and promoter regulates cyclin D1 expression.

Dalvai M, Bellucci L, Fleury L, Lavigne AC, Moutahir F, Bystricky K.

Oncogene. 2013 Sep 5;32(36):4243-51. doi: 10.1038/onc.2012.442. Epub 2012 Oct 29.

PMID:
23108396
23.

Tracking of single and multiple genomic loci in living yeast cells.

Lassadi I, Bystricky K.

Methods Mol Biol. 2011;745:499-522. doi: 10.1007/978-1-61779-129-1_29.

PMID:
21660713
24.

Ligands specify estrogen receptor alpha nuclear localization and degradation.

Kocanova S, Mazaheri M, Caze-Subra S, Bystricky K.

BMC Cell Biol. 2010 Dec 10;11:98. doi: 10.1186/1471-2121-11-98.

25.

Auraptene is an inhibitor of cholesterol esterification and a modulator of estrogen receptors.

de Medina P, Genovese S, Paillasse MR, Mazaheri M, Caze-Subra S, Bystricky K, Curini M, Silvente-Poirot S, Epifano F, Poirot M.

Mol Pharmacol. 2010 Nov;78(5):827-36. doi: 10.1124/mol.110.065250. Epub 2010 Aug 11.

PMID:
20702762
26.

Cell cycle and anti-estrogen effects synergize to regulate cell proliferation and ER target gene expression.

Dalvai M, Bystricky K.

PLoS One. 2010 Jun 8;5(6):e11011. doi: 10.1371/journal.pone.0011011.

27.

Activation of estrogen-responsive genes does not require their nuclear co-localization.

Kocanova S, Kerr EA, Rafique S, Boyle S, Katz E, Caze-Subra S, Bickmore WA, Bystricky K.

PLoS Genet. 2010 Apr 22;6(4):e1000922. doi: 10.1371/journal.pgen.1000922.

28.

The role of histone modifications and variants in regulating gene expression in breast cancer.

Dalvai M, Bystricky K.

J Mammary Gland Biol Neoplasia. 2010 Mar;15(1):19-33. doi: 10.1007/s10911-010-9167-z. Epub 2010 Feb 4. Review.

PMID:
20131086
29.

Lab-on-Chip for fast 3D particle tracking in living cells.

Hajjoul H, Kocanova S, Lassadi I, Bystricky K, Bancaud A.

Lab Chip. 2009 Nov 7;9(21):3054-8. doi: 10.1039/b909016a. Epub 2009 Sep 2.

PMID:
19823719
30.

The Saccharomyces cerevisiae vacuolar acid trehalase is targeted at the cell surface for its physiological function.

He S, Bystricky K, Leon S, François JM, Parrou JL.

FEBS J. 2009 Oct;276(19):5432-46. doi: 10.1111/j.1742-4658.2009.07227.x. Epub 2009 Aug 24.

31.

Genome duality.

Kocanova S, Bystricky K.

Genome Biol. 2009;10(5):308. doi: 10.1186/gb-2009-10-5-308. Epub 2009 May 28.

32.

Yeast silent mating type loci form heterochromatic clusters through silencer protein-dependent long-range interactions.

Miele A, Bystricky K, Dekker J.

PLoS Genet. 2009 May;5(5):e1000478. doi: 10.1371/journal.pgen.1000478. Epub 2009 May 8.

33.

Regulation of nuclear positioning and dynamics of the silent mating type loci by the yeast Ku70/Ku80 complex.

Bystricky K, Van Attikum H, Montiel MD, Dion V, Gehlen L, Gasser SM.

Mol Cell Biol. 2009 Feb;29(3):835-48. doi: 10.1128/MCB.01009-08. Epub 2008 Dec 1.

34.

Eliminating epigenetic barriers induces transient hormone-regulated gene expression in estrogen receptor negative breast cancer cells.

Fleury L, Gerus M, Lavigne AC, Richard-Foy H, Bystricky K.

Oncogene. 2008 Jul 3;27(29):4075-85. doi: 10.1038/onc.2008.41. Epub 2008 Mar 3.

PMID:
18317449
35.

Estrogen receptor alpha and the activating protein-1 complex cooperate during insulin-like growth factor-I-induced transcriptional activation of the pS2/TFF1 gene.

Baron S, Escande A, Albérola G, Bystricky K, Balaguer P, Richard-Foy H.

J Biol Chem. 2007 Apr 20;282(16):11732-41. Epub 2007 Feb 22.

36.

Chromosome looping in yeast: telomere pairing and coordinated movement reflect anchoring efficiency and territorial organization.

Bystricky K, Laroche T, van Houwe G, Blaszczyk M, Gasser SM.

J Cell Biol. 2005 Jan 31;168(3):375-87.

37.

Long-range compaction and flexibility of interphase chromatin in budding yeast analyzed by high-resolution imaging techniques.

Bystricky K, Heun P, Gehlen L, Langowski J, Gasser SM.

Proc Natl Acad Sci U S A. 2004 Nov 23;101(47):16495-500. Epub 2004 Nov 15.

38.

Chromatin fiber folding: requirement for the histone H4 N-terminal tail.

Dorigo B, Schalch T, Bystricky K, Richmond TJ.

J Mol Biol. 2003 Mar 14;327(1):85-96.

PMID:
12614610
39.

Catadioptric lens with aberrations balanced by aspherizing one surface.

Bystricky KM, Yoder PR Jr.

Appl Opt. 1985 Apr 15;24(8):1206. No abstract available.

PMID:
18217100

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