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The CRISPR toolbox in medical mycology: State of the art and perspectives.

Morio F, Lombardi L, Butler G.

PLoS Pathog. 2020 Jan 16;16(1):e1008201. doi: 10.1371/journal.ppat.1008201. eCollection 2020 Jan. Review.


TranCEP: Predicting the substrate class of transmembrane transport proteins using compositional, evolutionary, and positional information.

Alballa M, Aplop F, Butler G.

PLoS One. 2020 Jan 14;15(1):e0227683. doi: 10.1371/journal.pone.0227683. eCollection 2020.


High-resolution mycobiota analysis reveals dynamic intestinal translocation preceding invasive candidiasis.

Zhai B, Ola M, Rolling T, Tosini NL, Joshowitz S, Littmann ER, Amoretti LA, Fontana E, Wright RJ, Miranda E, Veelken CA, Morjaria SM, Peled JU, van den Brink MRM, Babady NE, Butler G, Taur Y, Hohl TM.

Nat Med. 2020 Jan;26(1):59-64. doi: 10.1038/s41591-019-0709-7. Epub 2020 Jan 6.


Sudden sex hormone withdrawal and the effects on body composition in late pubertal adolescents with gender dysphoria.

Ghelani R, Lim C, Brain C, Fewtrell M, Butler G.

J Pediatr Endocrinol Metab. 2020 Jan 28;33(1):107-112. doi: 10.1515/jpem-2019-0045.


Developing content for national population health surveys: an example using a newly developed sedentary behaviour module.

Prince SA, Butler GP, Roberts KC, Lapointe P, MacKenzie AM, Colley RC, Foley M, Saunders TJ, Thompson W.

Arch Public Health. 2019 Dec 4;77:53. doi: 10.1186/s13690-019-0380-y. eCollection 2019.


Draft Genome Sequence of the Birch Tree Fungal Pathogen Taphrina betulina UCD315.

Heneghan P, Ryan AP, Nimmo D, Duggan C, Kumar P, O'Gaora P, Ó 'Cinnéide E, Byrne KP, Wolfe KH, O'Brien CE, Butler G.

Microbiol Resour Announc. 2019 Nov 27;8(48). pii: e01255-19. doi: 10.1128/MRA.01255-19.


Moonlighting matrix metalloproteinase substrates: Enhancement of proinflammatory functions of extracellular tyrosyl-tRNA synthetase upon cleavage.

Jobin PG, Solis N, Machado Y, Bell PA, Rai SK, Kwon NH, Kim S, Overall CM, Butler GS.

J Biol Chem. 2019 Nov 26. pii: jbc.RA119.010486. doi: 10.1074/jbc.RA119.010486. [Epub ahead of print]


Twisted in Pain: The Multidisciplinary Treatment Approach to Functional Dystonia.

Khachane Y, Kozlowska K, Savage B, McClure G, Butler G, Gray N, Worth A, Mihailovich S, Perez DL, Helgeland H, Chrousos GP.

Harv Rev Psychiatry. 2019 Nov/Dec;27(6):359-381. doi: 10.1097/HRP.0000000000000237. No abstract available.


ERAS Protocol for Pediatric Laparoscopic Cholecystectomy Promotes Safe and Early Discharge.

Yeh A, Butler G, Strotmeyer S, Austin K, Visoiu M, Cladis F, Malek M.

J Pediatr Surg. 2019 Oct 25. pii: S0022-3468(19)30706-7. doi: 10.1016/j.jpedsurg.2019.09.053. [Epub ahead of print]


A randomized, placebo-controlled trial using a novel PAP delivery platform to treat patients with OSA and comorbid PTSD.

Holley A, Shaha D, Costan-Toth C, Slowik J, Robertson BD, Williams SG, Terry S, Golden D, Andrada T, Skeete S, Sheikh K, Butler G, Collen JF.

Sleep Breath. 2019 Nov 6. doi: 10.1007/s11325-019-01936-x. [Epub ahead of print]


Draft Genome Sequences of Two Isolates of the Yeast Kazachstania servazzii Recovered from Soil in Ireland.

Faherty L, Lewis C, McElheron M, Garvey N, Duggan R, Shovlin B, Ó Cróinín T, Byrne KP, O'Brien CE, Wolfe KH, Butler G.

Microbiol Resour Announc. 2019 Oct 31;8(44). pii: e01257-19. doi: 10.1128/MRA.01257-19.


Draft Genome Sequence of a Red Basidiomycete Yeast, Symmetrospora coprosmae Strain UCD350, Isolated from Soil in Ireland.

Almasoud J, McArdle L, Henne R, Mathews K, O'Connor Í, McLoughlin LE, Ó'Gaora P, Byrne KP, O'Brien CE, Wolfe KH, Butler G.

Microbiol Resour Announc. 2019 Oct 31;8(44). pii: e01256-19. doi: 10.1128/MRA.01256-19.


Mathematical modelling of cell migration.

Butler G, Rudge J, Dash PR.

Essays Biochem. 2019 Oct 31;63(5):631-637. doi: 10.1042/EBC20190020.


Oxytocin reduces post-stress sweet snack intake in women without attenuating salivary cortisol.

Burmester V, Gibson EL, Butler G, Bailey A, Terry P.

Physiol Behav. 2019 Dec 1;212:112704. doi: 10.1016/j.physbeh.2019.112704. Epub 2019 Oct 16.


Matrix-Delivered Autologous Mesenchymal Stem Cell Therapy for Refractory Rectovaginal Crohn's Fistulas.

Lightner AL, Dozois EJ, Dietz AB, Fletcher JG, Friton J, Butler G, Faubion WA.

Inflamm Bowel Dis. 2019 Oct 12. pii: izz215. doi: 10.1093/ibd/izz215. [Epub ahead of print]


The Role of MMP8 in Cancer: A Systematic Review.

Juurikka K, Butler GS, Salo T, Nyberg P, Åström P.

Int J Mol Sci. 2019 Sep 11;20(18). pii: E4506. doi: 10.3390/ijms20184506. Review.


The effect of GnRH analogue treatment on bone mineral density in young adolescents with gender dysphoria: findings from a large national cohort.

Joseph T, Ting J, Butler G.

J Pediatr Endocrinol Metab. 2019 Oct 25;32(10):1077-1081. doi: 10.1515/jpem-2019-0046.


Cornstarch requirements of the adult glycogen storage disease Ia population: A retrospective review.

Dahlberg KR, Ferrecchia IA, Dambska-Williams M, Resler TE, Ross KM, Butler GL, Kuo CL, Ryan PT, Weinstein DA.

J Inherit Metab Dis. 2019 Aug 15. doi: 10.1002/jimd.12160. [Epub ahead of print]


Correction for Ma et al., "Susceptibility to Medium-Chain Fatty Acids Is Associated with Trisomy of Chromosome 7 in Candida albicans".

Ma Q, Ola M, Iracane E, Butler G.

mSphere. 2019 Aug 14;4(4). pii: e00564-19. doi: 10.1128/mSphere.00564-19. No abstract available.


Correlating Genotype and Phenotype in the Asexual Yeast Candida orthopsilosis Implicates ZCF29 in Sensitivity to Caffeine.

de San Vicente KM, Schröder MS, Lombardi L, Iracane E, Butler G.

G3 (Bethesda). 2019 Sep 4;9(9):3035-3043. doi: 10.1534/g3.119.400348.


Matrix metalloproteinases inactivate the proinflammatory functions of secreted moonlighting tryptophanyl-tRNA synthetase.

Jobin PG, Solis N, Machado Y, Bell PA, Kwon NH, Kim S, Overall CM, Butler GS.

J Biol Chem. 2019 Aug 30;294(35):12866-12879. doi: 10.1074/jbc.RA119.009584. Epub 2019 Jul 19.


Comparison of self-reported and accelerometer-measured physical activity among Canadian youth.

Colley RC, Butler G, Garriguet D, Prince SA, Roberts KC.

Health Rep. 2019 Jul 17;30(7):3-12. doi: 10.25318/82-003-x201900700001-eng.


Novel Human Aminopeptidase N Inhibitors: Discovery and Optimization of Subsite Binding Interactions.

Lee J, Vinh NB, Drinkwater N, Yang W, Kannan Sivaraman K, Schembri LS, Gazdik M, Grin PM, Butler GS, Overall CM, Charman SA, McGowan S, Scammells PJ.

J Med Chem. 2019 Aug 8;62(15):7185-7209. doi: 10.1021/acs.jmedchem.9b00757. Epub 2019 Jul 18.


Susceptibility to Medium-Chain Fatty Acids Is Associated with Trisomy of Chromosome 7 in Candida albicans.

Ma Q, Ola M, Iracane E, Butler G.

mSphere. 2019 Jun 26;4(3). pii: e00402-19. doi: 10.1128/mSphere.00402-19. Erratum in: mSphere. 2019 Aug 14;4(4):.


Differing responses in milk composition from introducing rapeseed and naked oats to conventional and organic dairy diets.

Butler G, Stergiadis S, Chatzidimitriou E, Franceschin E, Davis HR, Leifert C, Steinshamn H.

Sci Rep. 2019 May 31;9(1):8115. doi: 10.1038/s41598-019-44567-8.


Precise genome editing using a CRISPR-Cas9 method highlights the role of CoERG11 amino acid substitutions in azole resistance in Candida orthopsilosis.

Morio F, Lombardi L, Binder U, Loge C, Robert E, Graessle D, Bodin M, Lass-Flörl C, Butler G, Le Pape P.

J Antimicrob Chemother. 2019 Aug 1;74(8):2230-2238. doi: 10.1093/jac/dkz204.


At-a-glance - Conceptualizing a framework for the surveillance of physical activity, sedentary behaviour and sleep in Canada.

Butler GP, Roberts KC, Kropac E, Rao DP, Branchard B, Prince SA, Wendy T, Gayatri J.

Health Promot Chronic Dis Prev Can. 2019 May;39(5):201-204. doi: 10.24095/hpcdp.39.5.04. English, French.


Growth hormone treatment and health-related quality of life in children and adolescents: A national, prospective, one-year controlled study.

Butler G, Turlejski T, Wales G, Bailey L, Wright N.

Clin Endocrinol (Oxf). 2019 Aug;91(2):304-313. doi: 10.1111/cen.14011. Epub 2019 May 23.


Evidence synthesis - Where are children and adults physically active and sedentary? - a rapid review of location-based studies.

Prince SA, Butler GP, Rao DP, Thompson W.

Health Promot Chronic Dis Prev Can. 2019 Mar;39(3):67-103. doi: 10.24095/hpcdp.39.3.01. Review. English, French.


Plasmid-Based CRISPR-Cas9 Gene Editing in Multiple Candida Species.

Lombardi L, Oliveira-Pacheco J, Butler G.

mSphere. 2019 Mar 13;4(2). pii: e00125-19. doi: 10.1128/mSphere.00125-19.


Candida parapsilosis: from Genes to the Bedside.

Tóth R, Nosek J, Mora-Montes HM, Gabaldon T, Bliss JM, Nosanchuk JD, Turner SA, Butler G, Vágvölgyi C, Gácser A.

Clin Microbiol Rev. 2019 Feb 27;32(2). pii: e00111-18. doi: 10.1128/CMR.00111-18. Print 2019 Mar 20. Review.


Sex and Pubertal Differences in the Type 1 Interferon Pathway Associate With Both X Chromosome Number and Serum Sex Hormone Concentration.

Webb K, Peckham H, Radziszewska A, Menon M, Oliveri P, Simpson F, Deakin CT, Lee S, Ciurtin C, Butler G, Wedderburn LR, Ioannou Y.

Front Immunol. 2019 Jan 15;9:3167. doi: 10.3389/fimmu.2018.03167. eCollection 2018.


ESPE and PES International Survey of Centers and Clinicians Delivering Specialist Care for Children and Adolescents with Gender Dysphoria.

Skordis N, Butler G, de Vries MC, Main K, Hannema SE.

Horm Res Paediatr. 2018;90(5):326-331. doi: 10.1159/000496115. Epub 2019 Jan 29.


Coverage-Versus-Length Plots, a Simple Quality Control Step for de Novo Yeast Genome Sequence Assemblies.

Douglass AP, O'Brien CE, Offei B, Coughlan AY, Ortiz-Merino RA, Butler G, Byrne KP, Wolfe KH.

G3 (Bethesda). 2019 Mar 7;9(3):879-887. doi: 10.1534/g3.118.200745.


Early Results of a Phase I Trial Using an Adipose-Derived Mesenchymal Stem Cell-Coated Fistula Plug for the Treatment of Transsphincteric Cryptoglandular Fistulas.

Dozois EJ, Lightner AL, Mathis KL, Chua HK, Kelley SR, Fletcher JG, Dietz AB, Friton JJ, Butler GW, Faubion WA.

Dis Colon Rectum. 2019 May;62(5):615-622. doi: 10.1097/DCR.0000000000001333.


Puberty blocking in gender dysphoria: suitable for all?

Butler G, Wren B, Carmichael P.

Arch Dis Child. 2019 Jun;104(6):509-510. doi: 10.1136/archdischild-2018-315984. Epub 2019 Jan 17. No abstract available.


Comparison of self-reported and accelerometer-measured physical activity in Canadian adults.

Colley RC, Butler G, Garriguet D, Prince SA, Roberts KC.

Health Rep. 2018 Dec 19;29(12):3-15.


Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.

Vinh NB, Drinkwater N, Malcolm TR, Kassiou M, Lucantoni L, Grin PM, Butler GS, Duffy S, Overall CM, Avery VM, Scammells PJ, McGowan S.

J Med Chem. 2019 Jan 24;62(2):622-640. doi: 10.1021/acs.jmedchem.8b01310. Epub 2019 Jan 4.


Identification of an Exceptionally Long Intron in the HAC1 Gene of Candida parapsilosis.

Iracane E, Donovan PD, Ola M, Butler G, Holland LM.

mSphere. 2018 Nov 7;3(6). pii: e00532-18. doi: 10.1128/mSphere.00532-18.


A Transcriptomics Approach To Unveiling the Mechanisms of In Vitro Evolution towards Fluconazole Resistance of a Candida glabrata Clinical Isolate.

Cavalheiro M, Costa C, Silva-Dias A, Miranda IM, Wang C, Pais P, Pinto SN, Mil-Homens D, Sato-Okamoto M, Takahashi-Nakaguchi A, Silva RM, Mira NP, Fialho AM, Chibana H, Rodrigues AG, Butler G, Teixeira MC.

Antimicrob Agents Chemother. 2018 Dec 21;63(1). pii: e00995-18. doi: 10.1128/AAC.00995-18. Print 2019 Jan.


Risk of Meningioma in European Patients Treated With Growth Hormone in Childhood: Results From the SAGhE Cohort.

Swerdlow AJ, Cooke R, Beckers D, Butler G, Carel JC, Cianfarani S, Clayton P, Coste J, Deodati A, Ecosse E, Hokken-Koelega ACS, Khan AJ, Kiess W, Kuehni CE, Flück CE, Pfaffle R, Sävendahl L, Sommer G, Thomas M, Tidblad A, Tollerfield S, Zandwijken GRJ.

J Clin Endocrinol Metab. 2019 Mar 1;104(3):658-664. doi: 10.1210/jc.2018-01133.


Newborn Screening for Primary Congenital Hypothyroidism: Estimating Test Performance at Different TSH Thresholds.

Knowles RL, Oerton J, Cheetham T, Butler G, Cavanagh C, Tetlow L, Dezateux C.

J Clin Endocrinol Metab. 2018 Oct 1;103(10):3720-3728. doi: 10.1210/jc.2018-00658.


Genome analysis of the yeast Diutina catenulata, a member of the Debaryomycetaceae/Metschnikowiaceae (CTG-Ser) clade.

O'Brien CE, McCarthy CGP, Walshe AE, Shaw DR, Sumski DA, Krassowski T, Fitzpatrick DA, Butler G.

PLoS One. 2018 Jun 26;13(6):e0198957. doi: 10.1371/journal.pone.0198957. eCollection 2018.


Draft Genome Sequence of a Highly Heterozygous Yeast Strain from the Metschnikowia pulcherrima Subclade, UCD127.

Venkatesh A, Murray AL, Boyle AB, Quinn Farrington L, Maher TJ, Ó'Gaora P, Wolfe KH, O'Brien CE, Butler G.

Genome Announc. 2018 Jun 21;6(25). pii: e00550-18. doi: 10.1128/genomeA.00550-18.


Draft Genome Sequence of the Yeast Nadsonia starkeyi-henricii UCD142, Isolated from Forest Soil in Ireland.

O'Boyle S, Bergin SA, Hussey ÉE, McLaughlin AD, Riddell LR, Byrne KP, Wolfe KH, O'Brien CE, Butler G.

Genome Announc. 2018 Jun 21;6(25). pii: e00549-18. doi: 10.1128/genomeA.00549-18.


Draft Genome Sequences of Two Natural Isolates of the Yeast Barnettozyma californica from Ireland, UCD09 and UCD89.

Mullen AA, Lynch CD, Hill SM, Holohan CP, Ó Cróinín T, Wolfe KH, O'Brien CE, Butler G.

Genome Announc. 2018 Jun 21;6(25). pii: e00548-18. doi: 10.1128/genomeA.00548-18.


Abiotic drivers of activity in a large, free-ranging, freshwater teleost, Murray cod (Maccullochella peelii).

Thiem JD, Wooden IJ, Baumgartner LJ, Butler GL, Forbes J, Taylor MD, Watts RJ.

PLoS One. 2018 Jun 8;13(6):e0198972. doi: 10.1371/journal.pone.0198972. eCollection 2018.


Enhancing the fatty acid profile of milk through forage-based rations, with nutrition modeling of diet outcomes.

Benbrook CM, Davis DR, Heins BJ, Latif MA, Leifert C, Peterman L, Butler G, Faergeman O, Abel-Caines S, Baranski M.

Food Sci Nutr. 2018 Feb 28;6(3):681-700. doi: 10.1002/fsn3.610. eCollection 2018 May.


TPP riboswitch-dependent regulation of an ancient thiamin transporter in Candida.

Donovan PD, Holland LM, Lombardi L, Coughlan AY, Higgins DG, Wolfe KH, Butler G.

PLoS Genet. 2018 May 31;14(5):e1007429. doi: 10.1371/journal.pgen.1007429. eCollection 2018 May.


Assessment and support of children and adolescents with gender dysphoria.

Butler G, De Graaf N, Wren B, Carmichael P.

Arch Dis Child. 2018 Jul;103(7):631-636. doi: 10.1136/archdischild-2018-314992. Epub 2018 Apr 12. Review. No abstract available.


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