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Items: 12

1.

Publisher Correction: Molecular phenomics and metagenomics of hepatic steatosis in non-diabetic obese women.

Hoyles L, Fernández-Real JM, Federici M, Serino M, Abbott J, Charpentier J, Heymes C, Luque JL, Anthony E, Barton RH, Chilloux J, Myridakis A, Martinez-Gili L, Moreno-Navarrete JM, Benhamed F, Azalbert V, Blasco-Baque V, Puig J, Xifra G, Ricart W, Tomlinson C, Woodbridge M, Cardellini M, Davato F, Cardolini I, Porzio O, Gentileschi P, Lopez F, Foufelle F, Butcher SA, Holmes E, Nicholson JK, Postic C, Burcelin R, Dumas ME.

Nat Med. 2018 Oct;24(10):1628. doi: 10.1038/s41591-018-0169-5.

PMID:
30093731
2.

Molecular phenomics and metagenomics of hepatic steatosis in non-diabetic obese women.

Hoyles L, Fernández-Real JM, Federici M, Serino M, Abbott J, Charpentier J, Heymes C, Luque JL, Anthony E, Barton RH, Chilloux J, Myridakis A, Martinez-Gili L, Moreno-Navarrete JM, Benhamed F, Azalbert V, Blasco-Baque V, Puig J, Xifra G, Ricart W, Tomlinson C, Woodbridge M, Cardellini M, Davato F, Cardolini I, Porzio O, Gentileschi P, Lopez F, Foufelle F, Butcher SA, Holmes E, Nicholson JK, Postic C, Burcelin R, Dumas ME.

Nat Med. 2018 Jul;24(7):1070-1080. doi: 10.1038/s41591-018-0061-3. Epub 2018 Jun 25. Erratum in: Nat Med. 2018 Aug 9;:.

3.

k-SLAM: accurate and ultra-fast taxonomic classification and gene identification for large metagenomic data sets.

Ainsworth D, Sternberg MJE, Raczy C, Butcher SA.

Nucleic Acids Res. 2017 Feb 28;45(4):1649-1656. doi: 10.1093/nar/gkw1248.

4.

XperimentR: painless annotation of a biological experiment for the laboratory scientist.

Tomlinson CD, Barton GR, Woodbridge M, Butcher SA.

BMC Bioinformatics. 2013 Jan 16;14:8. doi: 10.1186/1471-2105-14-8.

5.

Strategies towards sequencing complex crop genomes.

Abbott JC, Butcher SA.

Genome Biol. 2012 Nov 19;13(11):322. doi: 10.1186/gb4059.

6.

ADAM: automated data management for research datasets.

Woodbridge M, Tomlinson CD, Butcher SA.

Bioinformatics. 2013 Jan 1;29(1):146-7. doi: 10.1093/bioinformatics/bts644. Epub 2012 Oct 29.

7.

Genome expansion and gene loss in powdery mildew fungi reveal tradeoffs in extreme parasitism.

Spanu PD, Abbott JC, Amselem J, Burgis TA, Soanes DM, Stüber K, Ver Loren van Themaat E, Brown JK, Butcher SA, Gurr SJ, Lebrun MH, Ridout CJ, Schulze-Lefert P, Talbot NJ, Ahmadinejad N, Ametz C, Barton GR, Benjdia M, Bidzinski P, Bindschedler LV, Both M, Brewer MT, Cadle-Davidson L, Cadle-Davidson MM, Collemare J, Cramer R, Frenkel O, Godfrey D, Harriman J, Hoede C, King BC, Klages S, Kleemann J, Knoll D, Koti PS, Kreplak J, López-Ruiz FJ, Lu X, Maekawa T, Mahanil S, Micali C, Milgroom MG, Montana G, Noir S, O'Connell RJ, Oberhaensli S, Parlange F, Pedersen C, Quesneville H, Reinhardt R, Rott M, Sacristán S, Schmidt SM, Schön M, Skamnioti P, Sommer H, Stephens A, Takahara H, Thordal-Christensen H, Vigouroux M, Wessling R, Wicker T, Panstruga R.

Science. 2010 Dec 10;330(6010):1543-6. doi: 10.1126/science.1194573.

8.

Identification of genes selectively disallowed in the pancreatic islet.

Pullen TJ, Khan AM, Barton G, Butcher SA, Sun G, Rutter GA.

Islets. 2010 Mar-Apr;2(2):89-95. doi: 10.4161/isl.2.2.11025.

PMID:
21099300
9.

Bioinformatic analysis of Entamoeba histolytica SINE1 elements.

Huntley DM, Pandis I, Butcher SA, Ackers JP.

BMC Genomics. 2010 May 24;11:321. doi: 10.1186/1471-2164-11-321.

10.

EMAAS: an extensible grid-based rich internet application for microarray data analysis and management.

Barton G, Abbott J, Chiba N, Huang DW, Huang Y, Krznaric M, Mack-Smith J, Saleem A, Sherman BT, Tiwari B, Tomlinson C, Aitman T, Darlington J, Game L, Sternberg MJ, Butcher SA.

BMC Bioinformatics. 2008 Nov 25;9:493. doi: 10.1186/1471-2105-9-493.

11.

Protein identification and quantification by two-dimensional infrared spectroscopy: implications for an all-optical proteomic platform.

Fournier F, Gardner EM, Kedra DA, Donaldson PM, Guo R, Butcher SA, Gould IR, Willison KR, Klug DR.

Proc Natl Acad Sci U S A. 2008 Oct 7;105(40):15352-7. doi: 10.1073/pnas.0805127105. Epub 2008 Oct 1.

12.

Comparative whole-genome analyses reveal over 100 putative phase-variable genes in the pathogenic Neisseria spp.

Snyder LAS, Butcher SA, Saunders NJ.

Microbiology. 2001 Aug;147(Pt 8):2321-2332. doi: 10.1099/00221287-147-8-2321.

PMID:
11496009

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