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Items: 14

1.

A novel sequencing-based vaginal health assay combining self-sampling, HPV detection and genotyping, STI detection, and vaginal microbiome analysis.

Bik EM, Bird SW, Bustamante JP, Leon LE, Nieto PA, Addae K, Alegría-Mera V, Bravo C, Bravo D, Cardenas JP, Carson GA, Caughey A, Covarrubias PC, Pérez-Donoso J, Gass G, Gupta SL, Harman K, Hongo DMB, Jiménez JC, Kraal L, Melis-Arcos F, Morales EH, Morton A, Navas CF, Nuñez H, Olivares E, Órdenes-Aenishanslins N, Ossandon FJ, Phan R, Pino R, Soto-Liebe K, Varas I, Vera-Wolf P, Walton NA, Almonacid DE, Goddard AD, Ugalde JA, Zneimer S, Richman J, Apte ZS.

PLoS One. 2019 May 1;14(5):e0215945. doi: 10.1371/journal.pone.0215945. eCollection 2019.

2.

VarQ: A Tool for the Structural and Functional Analysis of Human Protein Variants.

Radusky L, Modenutti C, Delgado J, Bustamante JP, Vishnopolska S, Kiel C, Serrano L, Marti M, Turjanski A.

Front Genet. 2018 Dec 6;9:620. doi: 10.3389/fgene.2018.00620. eCollection 2018.

3.

Next generation sequencing panel based on single molecule molecular inversion probes for detecting genetic variants in children with hypopituitarism.

Pérez Millán MI, Vishnopolska SA, Daly AZ, Bustamante JP, Seilicovich A, Bergadá I, Braslavsky D, Keselman AC, Lemons RM, Mortensen AH, Marti MA, Camper SA, Kitzman JO.

Mol Genet Genomic Med. 2018 May 8. doi: 10.1002/mgg3.395. [Epub ahead of print]

4.

A quantitative model for oxygen uptake and release in a family of hemeproteins.

Bustamante JP, Szretter ME, Sued M, Martí MA, Estrin DA, Boechi L.

Bioinformatics. 2016 Jun 15;32(12):1805-13. doi: 10.1093/bioinformatics/btw083. Epub 2016 Feb 15.

5.

Evolutionary and Functional Relationships in the Truncated Hemoglobin Family.

Bustamante JP, Radusky L, Boechi L, Estrin DA, Ten Have A, Martí MA.

PLoS Comput Biol. 2016 Jan 20;12(1):e1004701. doi: 10.1371/journal.pcbi.1004701. eCollection 2016 Jan.

6.

The N-terminal pre-A region of Mycobacterium tuberculosis 2/2HbN promotes NO-dioxygenase activity.

Pesce A, Bustamante JP, Bidon-Chanal A, Boechi L, Estrin DA, Luque FJ, Sebilo A, Guertin M, Bolognesi M, Ascenzi P, Nardini M.

FEBS J. 2016 Jan;283(2):305-22. doi: 10.1111/febs.13571. Epub 2015 Nov 16.

7.

Structural flexibility of the heme cavity in the cold-adapted truncated hemoglobin from the Antarctic marine bacterium Pseudoalteromonas haloplanktis TAC125.

Giordano D, Pesce A, Boechi L, Bustamante JP, Caldelli E, Howes BD, Riccio A, di Prisco G, Nardini M, Estrin D, Smulevich G, Bolognesi M, Verde C.

FEBS J. 2015 Aug;282(15):2948-65. doi: 10.1111/febs.13335. Epub 2015 Jun 26.

8.

Ligand uptake in Mycobacterium tuberculosis truncated hemoglobins is controlled by both internal tunnels and active site water molecules.

Boron I, Bustamante JP, Davidge KS, Singh S, Bowman LA, Tinajero-Trejo M, Carballal S, Radi R, Poole RK, Dikshit K, Estrin DA, Marti MA, Boechi L.

Version 2. F1000Res. 2015 Jan 23 [revised 2015 Jan 1];4:22. doi: 10.12688/f1000research.5921.2. eCollection 2015.

9.

Interplay of the H-bond donor-acceptor role of the distal residues in hydroxyl ligand stabilization of Thermobifida fusca truncated hemoglobin.

Nicoletti FP, Bustamante JP, Droghetti E, Howes BD, Fittipaldi M, Bonamore A, Baiocco P, Feis A, Boffi A, Estrin DA, Smulevich G.

Biochemistry. 2014 Dec 30;53(51):8021-30. doi: 10.1021/bi501132a. Epub 2014 Dec 17.

PMID:
25437272
10.

Molecular basis of thermal stability in truncated (2/2) hemoglobins.

Bustamante JP, Bonamore A, Nadra AD, Sciamanna N, Boffi A, Estrin DA, Boechi L.

Biochim Biophys Acta. 2014 Jul;1840(7):2281-8. doi: 10.1016/j.bbagen.2014.03.018. Epub 2014 Apr 2.

PMID:
24704259
11.

Ligand uptake modulation by internal water molecules and hydrophobic cavities in hemoglobins.

Bustamante JP, Abbruzzetti S, Marcelli A, Gauto D, Boechi L, Bonamore A, Boffi A, Bruno S, Feis A, Foggi P, Estrin DA, Viappiani C.

J Phys Chem B. 2014 Feb 6;118(5):1234-45. doi: 10.1021/jp410724z. Epub 2014 Jan 23.

PMID:
24410478
12.

H-bonding networks of the distal residues and water molecules in the active site of Thermobifida fusca hemoglobin.

Nicoletti FP, Droghetti E, Howes BD, Bustamante JP, Bonamore A, Sciamanna N, Estrin DA, Feis A, Boffi A, Smulevich G.

Biochim Biophys Acta. 2013 Sep;1834(9):1901-9. doi: 10.1016/j.bbapap.2013.02.033. Epub 2013 Mar 5.

PMID:
23467007
13.

Following ligand migration pathways from picoseconds to milliseconds in type II truncated hemoglobin from Thermobifida fusca.

Marcelli A, Abbruzzetti S, Bustamante JP, Feis A, Bonamore A, Boffi A, Gellini C, Salvi PR, Estrin DA, Bruno S, Viappiani C, Foggi P.

PLoS One. 2012;7(7):e39884. doi: 10.1371/journal.pone.0039884. Epub 2012 Jul 6.

14.

Chronic pain in a victim of attempted homicide.

Ford CV, Castelnuovo-Tedesco P, Goodman SJ, Bustamante JP, Long K.

Int J Psychiatry Med. 1974 Summer;5(3):283-93. No abstract available.

PMID:
9335922

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