Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 601


Hydrophobic catalysis and a potential biological role of DNA unstacking induced by environment effects.

Feng B, Sosa RP, Mårtensson AKF, Jiang K, Tong A, Dorfman KD, Takahashi M, Lincoln P, Bustamante CJ, Westerlund F, Nordén B.

Proc Natl Acad Sci U S A. 2019 Aug 14. pii: 201909122. doi: 10.1073/pnas.1909122116. [Epub ahead of print]


Genomic Evidence for Local Adaptation of Hunter-Gatherers to the African Rainforest.

Lopez M, Choin J, Sikora M, Siddle K, Harmant C, Costa HA, Silvert M, Mouguiama-Daouda P, Hombert JM, Froment A, Le Bomin S, Perry GH, Barreiro LB, Bustamante CD, Verdu P, Patin E, Quintana-Murci L.

Curr Biol. 2019 Jul 13. pii: S0960-9822(19)30858-9. doi: 10.1016/j.cub.2019.07.013. [Epub ahead of print]


High-resolution and high-accuracy topographic and transcriptional maps of the nucleosome barrier.

Chen Z, Gabizon R, Brown AI, Lee A, Song A, Diaz-Celis C, Kaplan CD, Koslover EF, Yao T, Bustamante C.

Elife. 2019 Jul 31;8. pii: e48281. doi: 10.7554/eLife.48281. [Epub ahead of print]


DeepTag: inferring diagnoses from veterinary clinical notes.

Nie A, Zehnder A, Page RL, Zhang Y, Pineda AL, Rivas MA, Bustamante CD, Zou J.

NPJ Digit Med. 2018 Oct 24;1:60. doi: 10.1038/s41746-018-0067-8. eCollection 2018.


Non-equilibrium dynamics of a nascent polypeptide during translation suppress its misfolding.

Alexander LM, Goldman DH, Wee LM, Bustamante C.

Nat Commun. 2019 Jun 20;10(1):2709. doi: 10.1038/s41467-019-10647-6.


Genetic analyses of diverse populations improves discovery for complex traits.

Wojcik GL, Graff M, Nishimura KK, Tao R, Haessler J, Gignoux CR, Highland HM, Patel YM, Sorokin EP, Avery CL, Belbin GM, Bien SA, Cheng I, Cullina S, Hodonsky CJ, Hu Y, Huckins LM, Jeff J, Justice AE, Kocarnik JM, Lim U, Lin BM, Lu Y, Nelson SC, Park SL, Poisner H, Preuss MH, Richard MA, Schurmann C, Setiawan VW, Sockell A, Vahi K, Verbanck M, Vishnu A, Walker RW, Young KL, Zubair N, Acuña-Alonso V, Ambite JL, Barnes KC, Boerwinkle E, Bottinger EP, Bustamante CD, Caberto C, Canizales-Quinteros S, Conomos MP, Deelman E, Do R, Doheny K, Fernández-Rhodes L, Fornage M, Hailu B, Heiss G, Henn BM, Hindorff LA, Jackson RD, Laurie CA, Laurie CC, Li Y, Lin DY, Moreno-Estrada A, Nadkarni G, Norman PJ, Pooler LC, Reiner AP, Romm J, Sabatti C, Sandoval K, Sheng X, Stahl EA, Stram DO, Thornton TA, Wassel CL, Wilkens LR, Winkler CA, Yoneyama S, Buyske S, Haiman CA, Kooperberg C, Le Marchand L, Loos RJF, Matise TC, North KE, Peters U, Kenny EE, Carlson CS.

Nature. 2019 Jun;570(7762):514-518. doi: 10.1038/s41586-019-1310-4. Epub 2019 Jun 19.


Peach Fruit Development: A Comparative Proteomic Study Between Endocarp and Mesocarp at Very Early Stages Underpins the Main Differential Biochemical Processes Between These Tissues.

Rodriguez CE, Bustamante CA, Budde CO, Müller GL, Drincovich MF, Lara MV.

Front Plant Sci. 2019 Jun 4;10:715. doi: 10.3389/fpls.2019.00715. eCollection 2019.


AtCAF-1 mutants show different DNA damage responses after ultraviolet-B than those activated by other genotoxic agents in leaves.

Maulión E, Gomez MS, Bustamante CA, Casati P.

Plant Cell Environ. 2019 May 30. doi: 10.1111/pce.13596. [Epub ahead of print]


Being a first-time father. Their experiences and meanings: A Qualitative Systematic Review.

Márquez F, Lucchini C, Bertolozzi MR, Bustamante C, Strain H, Alcayaga C, Garay N.

Rev Chil Pediatr. 2019;90(1):78-88. doi: 10.32641/rchped.v90i1.821.


Integrating field-based heat tents and cyber-physical system technology to phenotype high night-time temperature impact on winter wheat.

Hein NT, Wagner D, Bheemanahalli R, Šebela D, Bustamante C, Chiluwal A, Neilsen ML, Jagadish SVK.

Plant Methods. 2019 Apr 24;15:41. doi: 10.1186/s13007-019-0424-x. eCollection 2019.


Development and characterization of 17 polymorphic microsatellite markers for the reef manta ray (Mobula alfredi).

Armstrong AJ, Dudgeon CL, Bustamante C, Bennett MB, Ovenden JR.

BMC Res Notes. 2019 Apr 22;12(1):233. doi: 10.1186/s13104-019-4270-8.


A genetic counseling needs assessment of Mexico.

Bucio D, Ormond KE, Hernandez D, Bustamante CD, Lopez Pineda A.

Mol Genet Genomic Med. 2019 May;7(5):e668. doi: 10.1002/mgg3.668. Epub 2019 Apr 1.


Mitogenomes illuminate the origin and migration patterns of the indigenous people of the Canary Islands.

Fregel R, Ordóñez AC, Santana-Cabrera J, Cabrera VM, Velasco-Vázquez J, Alberto V, Moreno-Benítez MA, Delgado-Darias T, Rodríguez-Rodríguez A, Hernández JC, Pais J, González-Montelongo R, Lorenzo-Salazar JM, Flores C, Cruz-de-Mercadal MC, Álvarez-Rodríguez N, Shapiro B, Arnay M, Bustamante CD.

PLoS One. 2019 Mar 20;14(3):e0209125. doi: 10.1371/journal.pone.0209125. eCollection 2019.


Using a system's equilibrium behavior to reduce its energy dissipation in nonequilibrium processes.

Tafoya S, Large SJ, Liu S, Bustamante C, Sivak DA.

Proc Natl Acad Sci U S A. 2019 Mar 26;116(13):5920-5924. doi: 10.1073/pnas.1817778116. Epub 2019 Mar 13.


Programming chain-growth copolymerization of DNA hairpin tiles for in-vitro hierarchical supramolecular organization.

Zhang H, Wang Y, Zhang H, Liu X, Lee A, Huang Q, Wang F, Chao J, Liu H, Li J, Shi J, Zuo X, Wang L, Wang L, Cao X, Bustamante C, Tian Z, Fan C.

Nat Commun. 2019 Mar 1;10(1):1006. doi: 10.1038/s41467-019-09004-4.


Association study in African-admixed populations across the Americas recapitulates asthma risk loci in non-African populations.

Daya M, Rafaels N, Brunetti TM, Chavan S, Levin AM, Shetty A, Gignoux CR, Boorgula MP, Wojcik G, Campbell M, Vergara C, Torgerson DG, Ortega VE, Doumatey A, Johnston HR, Acevedo N, Araujo MI, Avila PC, Belbin G, Bleecker E, Bustamante C, Caraballo L, Cruz A, Dunston GM, Eng C, Faruque MU, Ferguson TS, Figueiredo C, Ford JG, Gan W, Gourraud PA, Hansel NN, Hernandez RD, Herrera-Paz EF, Jiménez S, Kenny EE, Knight-Madden J, Kumar R, Lange LA, Lange EM, Lizee A, Maul P, Maul T, Mayorga A, Meyers D, Nicolae DL, O'Connor TD, Oliveira RR, Olopade CO, Olopade O, Qin ZS, Rotimi C, Vince N, Watson H, Wilks RJ, Wilson JG, Salzberg S, Ober C, Burchard EG, Williams LK, Beaty TH, Taub MA, Ruczinski I, Mathias RA, Barnes KC; CAAPA.

Nat Commun. 2019 Feb 20;10(1):880. doi: 10.1038/s41467-019-08469-7.


[Social support, self-rated health, treatment adherence and effectiveness in patients with type II diabetes and hypertension].

Poblete F, Barticevic N, Sapag JC, Tapia P, Bastías G, Quevedo D, Valdés C, Bustamante C, Alcayaga C, Pérez G.

Rev Med Chil. 2018 Dec;146(10):1135-1142. doi: 10.4067/S0034-98872018001001135. Spanish.


Xrare: a machine learning method jointly modeling phenotypes and genetic evidence for rare disease diagnosis.

Li Q, Zhao K, Bustamante CD, Ma X, Wong WH.

Genet Med. 2019 Jan 24. doi: 10.1038/s41436-019-0439-8. [Epub ahead of print]


Structural Variation Detection by Proximity Ligation from Formalin-Fixed, Paraffin-Embedded Tumor Tissue.

Troll CJ, Putnam NH, Hartley PD, Rice B, Blanchette M, Siddiqui S, Ganbat JO, Powers MP, Ramakrishnan R, Kunder CA, Bustamante CD, Zehnder JL, Green RE, Costa HA.

J Mol Diagn. 2019 May;21(3):375-383. doi: 10.1016/j.jmoldx.2018.11.003. Epub 2018 Dec 31.


Polygenic risk scores: a biased prediction?

De La Vega FM, Bustamante CD.

Genome Med. 2018 Dec 27;10(1):100. doi: 10.1186/s13073-018-0610-x. Review.


ATP-dependent force generation and membrane scission by ESCRT-III and Vps4.

Schöneberg J, Pavlin MR, Yan S, Righini M, Lee IH, Carlson LA, Bahrami AH, Goldman DH, Ren X, Hummer G, Bustamante C, Hurley JH.

Science. 2018 Dec 21;362(6421):1423-1428. doi: 10.1126/science.aat1839.


Rapid evolution of a skin-lightening allele in southern African KhoeSan.

Lin M, Siford RL, Martin AR, Nakagome S, Möller M, Hoal EG, Bustamante CD, Gignoux CR, Henn BM.

Proc Natl Acad Sci U S A. 2018 Dec 26;115(52):13324-13329. doi: 10.1073/pnas.1801948115. Epub 2018 Dec 10.


Standardized Biogeographic Grouping System for Annotating Populations in Pharmacogenetic Research.

Huddart R, Fohner AE, Whirl-Carrillo M, Wojcik GL, Gignoux CR, Popejoy AB, Bustamante CD, Altman RB, Klein TE.

Clin Pharmacol Ther. 2019 May;105(5):1256-1262. doi: 10.1002/cpt.1322. Epub 2019 Jan 21.


Gut microbiome transition across a lifestyle gradient in Himalaya.

Jha AR, Davenport ER, Gautam Y, Bhandari D, Tandukar S, Ng KM, Fragiadakis GK, Holmes S, Gautam GP, Leach J, Sherchand JB, Bustamante CD, Sonnenburg JL.

PLoS Biol. 2018 Nov 15;16(11):e2005396. doi: 10.1371/journal.pbio.2005396. eCollection 2018 Nov.


Preparation of Renewable Bio-Polyols from Two Species of Colliguaja for Rigid Polyurethane Foams.

Abril-Milán D, Valdés O, Mirabal-Gallardo Y, F de la Torre A, Bustamante C, Contreras J.

Materials (Basel). 2018 Nov 11;11(11). pii: E2244. doi: 10.3390/ma11112244.


Population genomic analyses of the chocolate tree, Theobroma cacao L., provide insights into its domestication process.

Cornejo OE, Yee MC, Dominguez V, Andrews M, Sockell A, Strandberg E, Livingstone D 3rd, Stack C, Romero A, Umaharan P, Royaert S, Tawari NR, Ng P, Gutierrez O, Phillips W, Mockaitis K, Bustamante CD, Motamayor JC.

Commun Biol. 2018 Oct 16;1:167. doi: 10.1038/s42003-018-0168-6. eCollection 2018.


Characterization of potential drug-drug interactions in patients hospitalized in the intensive care unit of a tertiary hospital in Bogotá

Hernández M, Tribiño G, Bustamante C.

Biomedica. 2018 Sep 1;38(3):407-416. doi: 10.7705/biomedica.v38i4.3884.


Gene expression imputation identifies candidate genes and susceptibility loci associated with cutaneous squamous cell carcinoma.

Ioannidis NM, Wang W, Furlotte NA, Hinds DA; 23andMe Research Team, Bustamante CD, Jorgenson E, Asgari MM, Whittemore AS.

Nat Commun. 2018 Oct 15;9(1):4264. doi: 10.1038/s41467-018-06149-6.


The clinical imperative for inclusivity: Race, ethnicity, and ancestry (REA) in genomics.

Popejoy AB, Ritter DI, Crooks K, Currey E, Fullerton SM, Hindorff LA, Koenig B, Ramos EM, Sorokin EP, Wand H, Wright MW, Zou J, Gignoux CR, Bonham VL, Plon SE, Bustamante CD; Clinical Genome Resource (ClinGen) Ancestry and Diversity Working Group (ADWG).

Hum Mutat. 2018 Nov;39(11):1713-1720. doi: 10.1002/humu.23644.


Data mining of digitized health records in a resource-constrained setting reveals that timely immunophenotyping is associated with improved breast cancer outcomes.

López-Pineda A, Rodríguez-Moran MF, Álvarez-Aguilar C, Fuentes Valle SM, Acosta-Rosales R, Bhatt AS, Sheth SN, Bustamante CD.

BMC Cancer. 2018 Sep 27;18(1):933. doi: 10.1186/s12885-018-4833-4.


An admixture mapping meta-analysis implicates genetic variation at 18q21 with asthma susceptibility in Latinos.

Gignoux CR, Torgerson DG, Pino-Yanes M, Uricchio LH, Galanter J, Roth LA, Eng C, Hu D, Nguyen EA, Huntsman S, Mathias RA, Kumar R, Rodriguez-Santana J, Thakur N, Oh SS, McGarry M, Moreno-Estrada A, Sandoval K, Winkler CA, Seibold MA, Padhukasahasram B, Conti DV, Farber HJ, Avila P, Brigino-Buenaventura E, Lenoir M, Meade K, Serebrisky D, Borrell LN, Rodriguez-Cintron W, Thyne S, Joubert BR, Romieu I, Levin AM, Sienra-Monge JJ, Del Rio-Navarro BE, Gan W, Raby BA, Weiss ST, Bleecker E, Meyers DA, Martinez FJ, Gauderman WJ, Gilliland F, London SJ, Bustamante CD, Nicolae DL, Ober C, Sen S, Barnes K, Williams LK, Hernandez RD, Burchard EG.

J Allergy Clin Immunol. 2019 Mar;143(3):957-969. doi: 10.1016/j.jaci.2016.08.057. Epub 2018 Sep 7.


Imputation-Aware Tag SNP Selection To Improve Power for Large-Scale, Multi-ethnic Association Studies.

Wojcik GL, Fuchsberger C, Taliun D, Welch R, Martin AR, Shringarpure S, Carlson CS, Abecasis G, Kang HM, Boehnke M, Bustamante CD, Gignoux CR, Kenny EE.

G3 (Bethesda). 2018 Oct 3;8(10):3255-3267. doi: 10.1534/g3.118.200502.


In-solution Y-chromosome capture-enrichment on ancient DNA libraries.

Cruz-Dávalos DI, Nieves-Colón MA, Sockell A, Poznik GD, Schroeder H, Stone AC, Bustamante CD, Malaspinas AS, Ávila-Arcos MC.

BMC Genomics. 2018 Aug 14;19(1):608. doi: 10.1186/s12864-018-4945-x.


Network enhancement as a general method to denoise weighted biological networks.

Wang B, Pourshafeie A, Zitnik M, Zhu J, Bustamante CD, Batzoglou S, Leskovec J.

Nat Commun. 2018 Aug 6;9(1):3108. doi: 10.1038/s41467-018-05469-x.


Pause sequences facilitate entry into long-lived paused states by reducing RNA polymerase transcription rates.

Gabizon R, Lee A, Vahedian-Movahed H, Ebright RH, Bustamante CJ.

Nat Commun. 2018 Jul 26;9(1):2930. doi: 10.1038/s41467-018-05344-9.


Molecular switch-like regulation enables global subunit coordination in a viral ring ATPase.

Tafoya S, Liu S, Castillo JP, Atz R, Morais MC, Grimes S, Jardine PJ, Bustamante C.

Proc Natl Acad Sci U S A. 2018 Jul 31;115(31):7961-7966. doi: 10.1073/pnas.1802736115. Epub 2018 Jul 16.


Ancient genomes from North Africa evidence prehistoric migrations to the Maghreb from both the Levant and Europe.

Fregel R, Méndez FL, Bokbot Y, Martín-Socas D, Camalich-Massieu MD, Santana J, Morales J, Ávila-Arcos MC, Underhill PA, Shapiro B, Wojcik G, Rasmussen M, Soares AER, Kapp J, Sockell A, Rodríguez-Santos FJ, Mikdad A, Trujillo-Mederos A, Bustamante CD.

Proc Natl Acad Sci U S A. 2018 Jun 26;115(26):6774-6779. doi: 10.1073/pnas.1800851115. Epub 2018 Jun 12. Erratum in: Proc Natl Acad Sci U S A. 2018 Jul 24;115(30):E7231.


Spectrum and prevalence of genetic predisposition in medulloblastoma: a retrospective genetic study and prospective validation in a clinical trial cohort.

Waszak SM, Northcott PA, Buchhalter I, Robinson GW, Sutter C, Groebner S, Grund KB, Brugières L, Jones DTW, Pajtler KW, Morrissy AS, Kool M, Sturm D, Chavez L, Ernst A, Brabetz S, Hain M, Zichner T, Segura-Wang M, Weischenfeldt J, Rausch T, Mardin BR, Zhou X, Baciu C, Lawerenz C, Chan JA, Varlet P, Guerrini-Rousseau L, Fults DW, Grajkowska W, Hauser P, Jabado N, Ra YS, Zitterbart K, Shringarpure SS, De La Vega FM, Bustamante CD, Ng HK, Perry A, MacDonald TJ, Hernáiz Driever P, Bendel AE, Bowers DC, McCowage G, Chintagumpala MM, Cohn R, Hassall T, Fleischhack G, Eggen T, Wesenberg F, Feychting M, Lannering B, Schüz J, Johansen C, Andersen TV, Röösli M, Kuehni CE, Grotzer M, Kjaerheim K, Monoranu CM, Archer TC, Duke E, Pomeroy SL, Shelagh R, Frank S, Sumerauer D, Scheurlen W, Ryzhova MV, Milde T, Kratz CP, Samuel D, Zhang J, Solomon DA, Marra M, Eils R, Bartram CR, von Hoff K, Rutkowski S, Ramaswamy V, Gilbertson RJ, Korshunov A, Taylor MD, Lichter P, Malkin D, Gajjar A, Korbel JO, Pfister SM.

Lancet Oncol. 2018 Jun;19(6):785-798. doi: 10.1016/S1470-2045(18)30242-0. Epub 2018 May 9.


Molecular switch-like regulation in motor proteins.

Tafoya S, Bustamante C.

Philos Trans R Soc Lond B Biol Sci. 2018 Jun 19;373(1749). pii: 20170181. doi: 10.1098/rstb.2017.0181. Review.


Population structure in Argentina.

Muzzio M, Motti JMB, Paz Sepulveda PB, Yee MC, Cooke T, Santos MR, Ramallo V, Alfaro EL, Dipierri JE, Bailliet G, Bravi CM, Bustamante CD, Kenny EE.

PLoS One. 2018 May 1;13(5):e0196325. doi: 10.1371/journal.pone.0196325. eCollection 2018.


Medical relevance of protein-truncating variants across 337,205 individuals in the UK Biobank study.

DeBoever C, Tanigawa Y, Lindholm ME, McInnes G, Lavertu A, Ingelsson E, Chang C, Ashley EA, Bustamante CD, Daly MJ, Rivas MA.

Nat Commun. 2018 Apr 24;9(1):1612. doi: 10.1038/s41467-018-03910-9.


Next-Generation Sequencing of the Complete Mitochondrial Genome of the Endangered Species Black Lion Tamarin Leontopithecus chrysopygus (Primates) and Mitogenomic Phylogeny Focusing on the Callitrichidae Family.

de Freitas PD, Mendez FL, Chávez-Congrains K, Galetti PM Jr, Coutinho LL, Pissinatti A, Bustamante CD.

G3 (Bethesda). 2018 May 31;8(6):1985-1991. doi: 10.1534/g3.118.200153.


Genomic insights into the origin and diversification of late maritime hunter-gatherers from the Chilean Patagonia.

de la Fuente C, Ávila-Arcos MC, Galimany J, Carpenter ML, Homburger JR, Blanco A, Contreras P, Cruz Dávalos D, Reyes O, San Roman M, Moreno-Estrada A, Campos PF, Eng C, Huntsman S, Burchard EG, Malaspinas AS, Bustamante CD, Willerslev E, Llop E, Verdugo RA, Moraga M.

Proc Natl Acad Sci U S A. 2018 Apr 24;115(17):E4006-E4012. doi: 10.1073/pnas.1715688115. Epub 2018 Apr 9.


Whole-genome sequencing of Atacama skeleton shows novel mutations linked with dysplasia.

Bhattacharya S, Li J, Sockell A, Kan MJ, Bava FA, Chen SC, Ávila-Arcos MC, Ji X, Smith E, Asadi NB, Lachman RS, Lam HYK, Bustamante CD, Butte AJ, Nolan GP.

Genome Res. 2018 Apr;28(4):423-431. doi: 10.1101/gr.223693.117. Epub 2018 Mar 22.


Mechanochemical coupling and bi-phasic force-velocity dependence in the ultra-fast ring ATPase SpoIIIE.

Liu N, Chistol G, Cui Y, Bustamante C.

Elife. 2018 Mar 5;7. pii: e32354. doi: 10.7554/eLife.32354.


Origins and genetic legacies of the Caribbean Taino.

Schroeder H, Sikora M, Gopalakrishnan S, Cassidy LM, Maisano Delser P, Sandoval Velasco M, Schraiber JG, Rasmussen S, Homburger JR, Ávila-Arcos MC, Allentoft ME, Moreno-Mayar JV, Renaud G, Gómez-Carballa A, Laffoon JE, Hopkins RJA, Higham TFG, Carr RS, Schaffer WC, Day JS, Hoogland M, Salas A, Bustamante CD, Nielsen R, Bradley DG, Hofman CL, Willerslev E.

Proc Natl Acad Sci U S A. 2018 Mar 6;115(10):2341-2346. doi: 10.1073/pnas.1716839115. Epub 2018 Feb 20.


Full molecular trajectories of RNA polymerase at single base-pair resolution.

Righini M, Lee A, Cañari-Chumpitaz C, Lionberger T, Gabizon R, Coello Y, Tinoco I Jr, Bustamante C.

Proc Natl Acad Sci U S A. 2018 Feb 6;115(6):1286-1291. doi: 10.1073/pnas.1719906115. Epub 2018 Jan 19.


A genome-wide association study identifies only two ancestry specific variants associated with spontaneous preterm birth.

Rappoport N, Toung J, Hadley D, Wong RJ, Fujioka K, Reuter J, Abbott CW, Oh S, Hu D, Eng C, Huntsman S, Bodian DL, Niederhuber JE, Hong X, Zhang G, Sikora-Wohfeld W, Gignoux CR, Wang H, Oehlert J, Jelliffe-Pawlowski LL, Gould JB, Darmstadt GL, Wang X, Bustamante CD, Snyder MP, Ziv E, Patsopoulos NA, Muglia LJ, Burchard E, Shaw GM, O'Brodovich HM, Stevenson DK, Butte AJ, Sirota M.

Sci Rep. 2018 Jan 9;8(1):226. doi: 10.1038/s41598-017-18246-5.


Whole-genome sequencing reveals the extent of heterozygosity in a preferentially self-fertilizing hermaphroditic vertebrate.

Lins LSF, Trojahn S, Sockell A, Yee MC, Tatarenkov A, Bustamante CD, Earley RL, Kelley JL.

Genome. 2018 Apr;61(4):241-247. doi: 10.1139/gen-2017-0188. Epub 2017 Dec 21.


Author Correction: The energy cost of polypeptide knot formation and its folding consequences.

Bustamante A, Sotelo-Campos J, Guerra DG, Floor M, Wilson CAM, Bustamante C, Báez M.

Nat Commun. 2017 Dec 14;8(1):2195. doi: 10.1038/s41467-017-02384-5.

Supplemental Content

Loading ...
Support Center