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Items: 35

1.

Very long intergenic non-coding RNA transcripts and expression profiles are associated to specific childhood acute lymphoblastic leukemia subtypes.

Caron M, St-Onge P, Drouin S, Richer C, Sontag T, Busche S, Bourque G, Pastinen T, Sinnett D.

PLoS One. 2018 Nov 15;13(11):e0207250. doi: 10.1371/journal.pone.0207250. eCollection 2018.

2.

Tumor-Specific Inhibition of In Situ Vaccination by Distant Untreated Tumor Sites.

Morris ZS, Guy EI, Werner LR, Carlson PM, Heinze CM, Kler JS, Busche SM, Jaquish AA, Sriramaneni RN, Carmichael LL, Loibner H, Gillies SD, Korman AJ, Erbe AK, Hank JA, Rakhmilevich AL, Harari PM, Sondel PM.

Cancer Immunol Res. 2018 Jul;6(7):825-834. doi: 10.1158/2326-6066.CIR-17-0353. Epub 2018 May 10.

PMID:
29748391
3.

Conserved expression of transposon-derived non-coding transcripts in primate stem cells.

Ramsay L, Marchetto MC, Caron M, Chen SH, Busche S, Kwan T, Pastinen T, Gage FH, Bourque G.

BMC Genomics. 2017 Feb 28;18(1):214. doi: 10.1186/s12864-017-3568-y.

4.

Increased DNA methylation variability in type 1 diabetes across three immune effector cell types.

Paul DS, Teschendorff AE, Dang MA, Lowe R, Hawa MI, Ecker S, Beyan H, Cunningham S, Fouts AR, Ramelius A, Burden F, Farrow S, Rowlston S, Rehnstrom K, Frontini M, Downes K, Busche S, Cheung WA, Ge B, Simon MM, Bujold D, Kwan T, Bourque G, Datta A, Lowy E, Clarke L, Flicek P, Libertini E, Heath S, Gut M, Gut IG, Ouwehand WH, Pastinen T, Soranzo N, Hofer SE, Karges B, Meissner T, Boehm BO, Cilio C, Elding Larsson H, Lernmark Å, Steck AK, Rakyan VK, Beck S, Leslie RD.

Nat Commun. 2016 Nov 29;7:13555. doi: 10.1038/ncomms13555.

5.

Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells.

Chen L, Ge B, Casale FP, Vasquez L, Kwan T, Garrido-Martín D, Watt S, Yan Y, Kundu K, Ecker S, Datta A, Richardson D, Burden F, Mead D, Mann AL, Fernandez JM, Rowlston S, Wilder SP, Farrow S, Shao X, Lambourne JJ, Redensek A, Albers CA, Amstislavskiy V, Ashford S, Berentsen K, Bomba L, Bourque G, Bujold D, Busche S, Caron M, Chen SH, Cheung W, Delaneau O, Dermitzakis ET, Elding H, Colgiu I, Bagger FO, Flicek P, Habibi E, Iotchkova V, Janssen-Megens E, Kim B, Lehrach H, Lowy E, Mandoli A, Matarese F, Maurano MT, Morris JA, Pancaldi V, Pourfarzad F, Rehnstrom K, Rendon A, Risch T, Sharifi N, Simon MM, Sultan M, Valencia A, Walter K, Wang SY, Frontini M, Antonarakis SE, Clarke L, Yaspo ML, Beck S, Guigo R, Rico D, Martens JHA, Ouwehand WH, Kuijpers TW, Paul DS, Stunnenberg HG, Stegle O, Downes K, Pastinen T, Soranzo N.

Cell. 2016 Nov 17;167(5):1398-1414.e24. doi: 10.1016/j.cell.2016.10.026.

6.

DNA methylome analysis of acute lymphoblastic leukemia cells reveals stochastic de novo DNA methylation in CpG islands.

Wahlberg P, Lundmark A, Nordlund J, Busche S, Raine A, Tandre K, Rönnblom L, Sinnett D, Forestier E, Pastinen T, Lönnerholm G, Syvänen AC.

Epigenomics. 2016 Oct;8(10):1367-1387. Epub 2016 Aug 23.

PMID:
27552300
7.

Population whole-genome bisulfite sequencing across two tissues highlights the environment as the principal source of human methylome variation.

Busche S, Shao X, Caron M, Kwan T, Allum F, Cheung WA, Ge B, Westfall S, Simon MM; Multiple Tissue Human Expression Resource, Barrett A, Bell JT, McCarthy MI, Deloukas P, Blanchette M, Bourque G, Spector TD, Lathrop M, Pastinen T, Grundberg E.

Genome Biol. 2015 Dec 23;16:290. doi: 10.1186/s13059-015-0856-1.

8.

Erratum: Characterization of functional methylomes by next-generation capture sequencing identifies novel disease-associated variants.

Allum F, Shao X, Guénard F, Simon MM, Busche S, Caron M, Lambourne J, Lessard J, Tandre K, Hedman ÅK, Kwan T, Ge B; Multiple Tissue Human Expression Resource Consortium, Rönnblom L, McCarthy MI, Deloukas P, Richmond T, Burgess D, Spector TD, Tchernof A, Marceau S, Lathrop M, Vohl MC, Pastinen T, Grundberg E.

Nat Commun. 2015 Jul 29;6:8016. doi: 10.1038/ncomms9016. No abstract available.

PMID:
26219997
9.

Epigenome data release: a participant-centered approach to privacy protection.

Dyke SO, Cheung WA, Joly Y, Ammerpohl O, Lutsik P, Rothstein MA, Caron M, Busche S, Bourque G, Rönnblom L, Flicek P, Beck S, Hirst M, Stunnenberg H, Siebert R, Walter J, Pastinen T.

Genome Biol. 2015 Jul 17;16:142. doi: 10.1186/s13059-015-0723-0.

10.

Characterization of functional methylomes by next-generation capture sequencing identifies novel disease-associated variants.

Allum F, Shao X, Guénard F, Simon MM, Busche S, Caron M, Lambourne J, Lessard J, Tandre K, Hedman ÅK, Kwan T, Ge B; Multiple Tissue Human Expression Resource Consortium, Rönnblom L, McCarthy MI, Deloukas P, Richmond T, Burgess D, Spector TD, Tchernof A, Marceau S, Lathrop M, Vohl MC, Pastinen T, Grundberg E.

Nat Commun. 2015 May 29;6:7211. doi: 10.1038/ncomms8211. Erratum in: Nat Commun. 2015;6:8016.

11.

An epigenome-wide association study of total serum immunoglobulin E concentration.

Liang L, Willis-Owen SAG, Laprise C, Wong KCC, Davies GA, Hudson TJ, Binia A, Hopkin JM, Yang IV, Grundberg E, Busche S, Hudson M, Rönnblom L, Pastinen TM, Schwartz DA, Lathrop GM, Moffatt MF, Cookson WOCM.

Nature. 2015 Apr 30;520(7549):670-674. doi: 10.1038/nature14125. Epub 2015 Feb 18.

12.

The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts.

Wagner JR, Busche S, Ge B, Kwan T, Pastinen T, Blanchette M.

Genome Biol. 2014 Feb 20;15(2):R37. doi: 10.1186/gb-2014-15-2-r37.

13.

Fusion of TTYH1 with the C19MC microRNA cluster drives expression of a brain-specific DNMT3B isoform in the embryonal brain tumor ETMR.

Kleinman CL, Gerges N, Papillon-Cavanagh S, Sin-Chan P, Pramatarova A, Quang DA, Adoue V, Busche S, Caron M, Djambazian H, Bemmo A, Fontebasso AM, Spence T, Schwartzentruber J, Albrecht S, Hauser P, Garami M, Klekner A, Bognar L, Montes JL, Staffa A, Montpetit A, Berube P, Zakrzewska M, Zakrzewski K, Liberski PP, Dong Z, Siegel PM, Duchaine T, Perotti C, Fleming A, Faury D, Remke M, Gallo M, Dirks P, Taylor MD, Sladek R, Pastinen T, Chan JA, Huang A, Majewski J, Jabado N.

Nat Genet. 2014 Jan;46(1):39-44. doi: 10.1038/ng.2849. Epub 2013 Dec 8.

PMID:
24316981
14.

Global analysis of DNA methylation variation in adipose tissue from twins reveals links to disease-associated variants in distal regulatory elements.

Grundberg E, Meduri E, Sandling JK, Hedman AK, Keildson S, Buil A, Busche S, Yuan W, Nisbet J, Sekowska M, Wilk A, Barrett A, Small KS, Ge B, Caron M, Shin SY; Multiple Tissue Human Expression Resource Consortium, Lathrop M, Dermitzakis ET, McCarthy MI, Spector TD, Bell JT, Deloukas P.

Am J Hum Genet. 2013 Nov 7;93(5):876-90. doi: 10.1016/j.ajhg.2013.10.004. Epub 2013 Oct 31. Erratum in: Am J Hum Genet. 2013 Dec 5;93(6):1158.

15.

Genome-wide signatures of differential DNA methylation in pediatric acute lymphoblastic leukemia.

Nordlund J, Bäcklin CL, Wahlberg P, Busche S, Berglund EC, Eloranta ML, Flaegstad T, Forestier E, Frost BM, Harila-Saari A, Heyman M, Jónsson OG, Larsson R, Palle J, Rönnblom L, Schmiegelow K, Sinnett D, Söderhäll S, Pastinen T, Gustafsson MG, Lönnerholm G, Syvänen AC.

Genome Biol. 2013 Sep 24;14(9):r105. doi: 10.1186/gb-2013-14-9-r105.

16.

Integration of high-resolution methylome and transcriptome analyses to dissect epigenomic changes in childhood acute lymphoblastic leukemia.

Busche S, Ge B, Vidal R, Spinella JF, Saillour V, Richer C, Healy J, Chen SH, Droit A, Sinnett D, Pastinen T.

Cancer Res. 2013 Jul 15;73(14):4323-36. doi: 10.1158/0008-5472.CAN-12-4367. Epub 2013 May 30.

17.

Mutations in SETD2 and genes affecting histone H3K36 methylation target hemispheric high-grade gliomas.

Fontebasso AM, Schwartzentruber J, Khuong-Quang DA, Liu XY, Sturm D, Korshunov A, Jones DT, Witt H, Kool M, Albrecht S, Fleming A, Hadjadj D, Busche S, Lepage P, Montpetit A, Staffa A, Gerges N, Zakrzewska M, Zakrzewski K, Liberski PP, Hauser P, Garami M, Klekner A, Bognar L, Zadeh G, Faury D, Pfister SM, Jabado N, Majewski J.

Acta Neuropathol. 2013 May;125(5):659-69. doi: 10.1007/s00401-013-1095-8. Epub 2013 Feb 16.

18.

Rare allelic forms of PRDM9 associated with childhood leukemogenesis.

Hussin J, Sinnett D, Casals F, Idaghdour Y, Bruat V, Saillour V, Healy J, Grenier JC, de Malliard T, Busche S, Spinella JF, Larivière M, Gibson G, Andersson A, Holmfeldt L, Ma J, Wei L, Zhang J, Andelfinger G, Downing JR, Mullighan CG, Awadalla P.

Genome Res. 2013 Mar;23(3):419-30. doi: 10.1101/gr.144188.112. Epub 2012 Dec 5.

19.

Human genetics in full resolution.

Schiavi A, Light N, Adoue V, Busche S, Pastinen T.

Genome Biol. 2011 Nov 24;12(11):309. doi: 10.1186/gb-2011-12-11-309.

20.

E-cadherin regulates MAL-SRF-mediated transcription in epithelial cells.

Busche S, Kremmer E, Posern G.

J Cell Sci. 2010 Aug 15;123(Pt 16):2803-9. doi: 10.1242/jcs.061887. Epub 2010 Jul 27.

21.

IR absorption and reflectometric interference spectroscopy (RIfS) combined to a new sensing approach for gas analytes absorbed into thin polymer films.

Leopold N, Busche S, Gauglitz G, Lendl B.

Spectrochim Acta A Mol Biomol Spectrosc. 2009 Jun;72(5):994-9. doi: 10.1016/j.saa.2008.12.032. Epub 2008 Dec 25.

PMID:
19233714
22.

Brillouin scattering spectra in high-power single-frequency ytterbium doped fiber amplifiers.

Hildebrandt M, Büsche S, Wessels P, Frede M, Kracht D.

Opt Express. 2008 Sep 29;16(20):15970-9.

PMID:
18825235
23.

Epithelial cell-cell contacts regulate SRF-mediated transcription via Rac-actin-MAL signalling.

Busche S, Descot A, Julien S, Genth H, Posern G.

J Cell Sci. 2008 Apr 1;121(Pt 7):1025-35. doi: 10.1242/jcs.014456. Epub 2008 Mar 11.

24.

Interaction behaviour of a PDMS-calixarene system and polar analytes characterised by microcalorimetry and spectroscopic methods.

Wöllner K, Vollprecht M, Leopold N, Kasper M, Busche S, Gauglitz G.

Anal Bioanal Chem. 2007 Nov;389(6):1879-87. Epub 2007 Oct 5.

PMID:
17917722
25.
26.

Contact-angle, ellipsometric, and spin-diffusion solid-state nuclear magnetic resonance spectroscopic investigations of copolymeric stationary phases immobilized on SiO2 surfaces.

Meyer C, Busche S, Welsch N, Wegmann J, Gauglitz G, Albert K.

Anal Bioanal Chem. 2005 Aug;382(7):1465-71. Epub 2005 Jul 7.

PMID:
16001236
27.

Different approaches to multivariate calibration of nonlinear sensor data.

Dieterle F, Busche S, Gauglitz G.

Anal Bioanal Chem. 2004 Oct;380(3):383-96. Epub 2004 May 20.

PMID:
15156303
28.

Novel role of macrophage migration inhibitory factor in angiotensin II regulation of neuromodulation in rat brain.

Busche S, Gallinat S, Fleegal MA, Raizada MK, Sumners C.

Endocrinology. 2001 Nov;142(11):4623-30.

PMID:
11606427
29.

Beyond blood pressure: new roles for angiotensin II.

Lucius R, Gallinat S, Busche S, Rosenstiel P, Unger T.

Cell Mol Life Sci. 1999 Dec;56(11-12):1008-19. Review.

PMID:
11212319
30.
31.

Expression of angiotensin AT(1) and AT(2) receptors in adult rat cardiomyocytes after myocardial infarction. A single-cell reverse transcriptase-polymerase chain reaction study.

Busche S, Gallinat S, Bohle RM, Reinecke A, Seebeck J, Franke F, Fink L, Zhu M, Sumners C, Unger T.

Am J Pathol. 2000 Aug;157(2):605-11.

32.

The angiotensin II type 2 receptor: an enigma with multiple variations.

Gallinat S, Busche S, Raizada MK, Sumners C.

Am J Physiol Endocrinol Metab. 2000 Mar;278(3):E357-74. Review.

33.

AT2 receptor stimulation induces generation of ceramides in PC12W cells.

Gallinat S, Busche S, Schütze S, Krönke M, Unger T.

FEBS Lett. 1999 Jan 22;443(1):75-9.

34.

[Improved eyedrop administration and compliance in glaucoma patients. A clinical study].

Busche S, Gramer E.

Klin Monbl Augenheilkd. 1997 Oct;211(4):257-62. German.

PMID:
9445914
35.

Efficacy of apraclonidine ophthalmic solution (Iopidine) in presumed silicon oil-induced glaucoma and primary open-angle glaucoma.

Gramer E, Busche S, Kampik A, Parsons D.

Graefes Arch Clin Exp Ophthalmol. 1995 Jan;233(1):13-20.

PMID:
7721118

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