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Items: 18

1.

The gene regulatory basis of genetic compensation during neural crest induction.

Dooley CM, Wali N, Sealy IM, White RJ, Stemple DL, Collins JE, Busch-Nentwich EM.

PLoS Genet. 2019 Jun 14;15(6):e1008213. doi: 10.1371/journal.pgen.1008213. [Epub ahead of print]

PMID:
31199790
2.

Dicer1 is required for pigment cell and craniofacial development in zebrafish.

Weiner AMJ, Scampoli NL, Steeman TJ, Dooley CM, Busch-Nentwich EM, Kelsh RN, Calcaterra NB.

Biochim Biophys Acta Gene Regul Mech. 2019 Apr;1862(4):472-485. doi: 10.1016/j.bbagrm.2019.02.005. Epub 2019 Mar 3.

PMID:
30840854
3.

Compensatory growth renders Tcf7l1a dispensable for eye formation despite its requirement in eye field specification.

Young RM, Hawkins TA, Cavodeassi F, Stickney HL, Schwarz Q, Lawrence LM, Wierzbicki C, Cheng BY, Luo J, Ambrosio EM, Klosner A, Sealy IM, Rowell J, Trivedi CA, Bianco IH, Allende ML, Busch-Nentwich EM, Gestri G, Wilson SW.

Elife. 2019 Feb 19;8. pii: e40093. doi: 10.7554/eLife.40093.

4.

scRNA-Seq reveals distinct stem cell populations that drive hair cell regeneration after loss of Fgf and Notch signaling.

Lush ME, Diaz DC, Koenecke N, Baek S, Boldt H, St Peter MK, Gaitan-Escudero T, Romero-Carvajal A, Busch-Nentwich EM, Perera AG, Hall KE, Peak A, Haug JS, Piotrowski T.

Elife. 2019 Jan 25;8. pii: e44431. doi: 10.7554/eLife.44431.

5.

Deep phenotyping in zebrafish reveals genetic and diet-induced adiposity changes that may inform disease risk.

Minchin JEN, Scahill CM, Staudt N, Busch-Nentwich EM, Rawls JF.

J Lipid Res. 2018 Aug;59(8):1536-1545. doi: 10.1194/jlr.D084525. Epub 2018 May 23.

PMID:
29794036
6.

The age of heterozygous telomerase mutant parents influences the adult phenotype of their offspring irrespective of genotype in zebrafish.

Scahill CM, Digby Z, Sealy IM, White RJ, Wali N, Collins JE, Stemple DL, Busch-Nentwich EM.

Wellcome Open Res. 2017 Sep 4;2:77. doi: 10.12688/wellcomeopenres.12530.2. eCollection 2017.

7.

Placentation defects are highly prevalent in embryonic lethal mouse mutants.

Perez-Garcia V, Fineberg E, Wilson R, Murray A, Mazzeo CI, Tudor C, Sienerth A, White JK, Tuck E, Ryder EJ, Gleeson D, Siragher E, Wardle-Jones H, Staudt N, Wali N, Collins J, Geyer S, Busch-Nentwich EM, Galli A, Smith JC, Robertson E, Adams DJ, Weninger WJ, Mohun T, Hemberger M.

Nature. 2018 Mar 22;555(7697):463-468. doi: 10.1038/nature26002. Epub 2018 Mar 14.

8.

mRNA processing in mutant zebrafish lines generated by chemical and CRISPR-mediated mutagenesis produces unexpected transcripts that escape nonsense-mediated decay.

Anderson JL, Mulligan TS, Shen MC, Wang H, Scahill CM, Tan FJ, Du SJ, Busch-Nentwich EM, Farber SA.

PLoS Genet. 2017 Nov 21;13(11):e1007105. doi: 10.1371/journal.pgen.1007105. eCollection 2017 Nov.

9.

A high-resolution mRNA expression time course of embryonic development in zebrafish.

White RJ, Collins JE, Sealy IM, Wali N, Dooley CM, Digby Z, Stemple DL, Murphy DN, Billis K, Hourlier T, Füllgrabe A, Davis MP, Enright AJ, Busch-Nentwich EM.

Elife. 2017 Nov 16;6. pii: e30860. doi: 10.7554/eLife.30860.

10.

Genetic Screen for Postembryonic Development in the Zebrafish (Danio rerio): Dominant Mutations Affecting Adult Form.

Henke K, Daane JM, Hawkins MB, Dooley CM, Busch-Nentwich EM, Stemple DL, Harris MP.

Genetics. 2017 Oct;207(2):609-623. doi: 10.1534/genetics.117.300187. Epub 2017 Aug 23.

11.

Loss of the chromatin modifier Kdm2aa causes BrafV600E-independent spontaneous melanoma in zebrafish.

Scahill CM, Digby Z, Sealy IM, Wojciechowska S, White RJ, Collins JE, Stemple DL, Bartke T, Mathers ME, Patton EE, Busch-Nentwich EM.

PLoS Genet. 2017 Aug 14;13(8):e1006959. doi: 10.1371/journal.pgen.1006959. eCollection 2017 Aug.

12.

KDM2A integrates DNA and histone modification signals through a CXXC/PHD module and direct interaction with HP1.

Borgel J, Tyl M, Schiller K, Pusztai Z, Dooley CM, Deng W, Wooding C, White RJ, Warnecke T, Leonhardt H, Busch-Nentwich EM, Bartke T.

Nucleic Acids Res. 2017 Feb 17;45(3):1114-1129. doi: 10.1093/nar/gkw979.

13.

Report of a Meeting on Contemporary Topics in Zebrafish Husbandry and Care.

Osborne N, Paull G, Grierson A, Dunford K, Busch-Nentwich EM, Sneddon LU, Wren N, Higgins J, Hawkins P.

Zebrafish. 2016 Dec;13(6):584-589. Epub 2016 Aug 18.

14.

Efficient identification of CRISPR/Cas9-induced insertions/deletions by direct germline screening in zebrafish.

Brocal I, White RJ, Dooley CM, Carruthers SN, Clark R, Hall A, Busch-Nentwich EM, Stemple DL, Kettleborough RN.

BMC Genomics. 2016 Mar 24;17:259. doi: 10.1186/s12864-016-2563-z.

15.

High-throughput and quantitative genome-wide messenger RNA sequencing for molecular phenotyping.

Collins JE, Wali N, Sealy IM, Morris JA, White RJ, Leonard SR, Jackson DK, Jones MC, Smerdon NC, Zamora J, Dooley CM, Carruthers SN, Barrett JC, Stemple DL, Busch-Nentwich EM.

BMC Genomics. 2015 Aug 5;16:578. doi: 10.1186/s12864-015-1788-6.

16.

Zebrafish models for nemaline myopathy reveal a spectrum of nemaline bodies contributing to reduced muscle function.

Sztal TE, Zhao M, Williams C, Oorschot V, Parslow AC, Giousoh A, Yuen M, Hall TE, Costin A, Ramm G, Bird PI, Busch-Nentwich EM, Stemple DL, Currie PD, Cooper ST, Laing NG, Nowak KJ, Bryson-Richardson RJ.

Acta Neuropathol. 2015 Sep;130(3):389-406. doi: 10.1007/s00401-015-1430-3. Epub 2015 May 1.

17.

Multi-allelic phenotyping--a systematic approach for the simultaneous analysis of multiple induced mutations.

Dooley CM, Scahill C, Fényes F, Kettleborough RN, Stemple DL, Busch-Nentwich EM.

Methods. 2013 Aug 15;62(3):197-206. doi: 10.1016/j.ymeth.2013.04.013. Epub 2013 Apr 23.

18.

A systematic genome-wide analysis of zebrafish protein-coding gene function.

Kettleborough RN, Busch-Nentwich EM, Harvey SA, Dooley CM, de Bruijn E, van Eeden F, Sealy I, White RJ, Herd C, Nijman IJ, Fényes F, Mehroke S, Scahill C, Gibbons R, Wali N, Carruthers S, Hall A, Yen J, Cuppen E, Stemple DL.

Nature. 2013 Apr 25;496(7446):494-7. doi: 10.1038/nature11992. Epub 2013 Apr 17.

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