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Items: 16

1.

Identification of a novel interspecific hybrid yeast from a metagenomic spontaneously inoculated beer sample using Hi-C.

Smukowski Heil C, Burton JN, Liachko I, Friedrich A, Hanson NA, Morris CL, Schacherer J, Shendure J, Thomas JH, Dunham MJ.

Yeast. 2018 Jan;35(1):71-84. doi: 10.1002/yea.3280. Epub 2017 Oct 19.

PMID:
28892574
2.

Off loading wheelchair cushion provides best case reduction in tissue deformation as indicated by MRI.

Call E, Hetzel T, McLean C, Burton JN, Oberg C.

J Tissue Viability. 2017 Aug;26(3):172-179. doi: 10.1016/j.jtv.2017.05.002. Epub 2017 May 18.

PMID:
28532968
3.

Correction: A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota.

Roach DJ, Burton JN, Lee C, Stackhouse B, Butler-Wu SM, Cookson BT, Shendure J, Salipante SJ.

PLoS Genet. 2017 Apr 14;13(4):e1006724. doi: 10.1371/journal.pgen.1006724. eCollection 2017 Apr.

4.

Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome.

Bickhart DM, Rosen BD, Koren S, Sayre BL, Hastie AR, Chan S, Lee J, Lam ET, Liachko I, Sullivan ST, Burton JN, Huson HJ, Nystrom JC, Kelley CM, Hutchison JL, Zhou Y, Sun J, Crisà A, Ponce de León FA, Schwartz JC, Hammond JA, Waldbieser GC, Schroeder SG, Liu GE, Dunham MJ, Shendure J, Sonstegard TS, Phillippy AM, Van Tassell CP, Smith TP.

Nat Genet. 2017 Apr;49(4):643-650. doi: 10.1038/ng.3802. Epub 2017 Mar 6.

5.

Multidisciplinary Management of Salivary Gland Cancers.

Mifsud MJ, Burton JN, Trotti AM, Padhya TA.

Cancer Control. 2016 Jul;23(3):242-8. Review.

PMID:
27556664
6.

A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota.

Roach DJ, Burton JN, Lee C, Stackhouse B, Butler-Wu SM, Cookson BT, Shendure J, Salipante SJ.

PLoS Genet. 2015 Jul 31;11(7):e1005413. doi: 10.1371/journal.pgen.1005413. eCollection 2015 Jul. Erratum in: PLoS Genet. 2017 Apr 14;13(4):e1006724.

7.

Accurate identification of centromere locations in yeast genomes using Hi-C.

Varoquaux N, Liachko I, Ay F, Burton JN, Shendure J, Dunham MJ, Vert JP, Noble WS.

Nucleic Acids Res. 2015 Jun 23;43(11):5331-9. doi: 10.1093/nar/gkv424. Epub 2015 May 4.

8.

In vitro, long-range sequence information for de novo genome assembly via transposase contiguity.

Adey A, Kitzman JO, Burton JN, Daza R, Kumar A, Christiansen L, Ronaghi M, Amini S, Gunderson KL, Steemers FJ, Shendure J.

Genome Res. 2014 Dec;24(12):2041-9. doi: 10.1101/gr.178319.114. Epub 2014 Oct 19.

9.

Species-level deconvolution of metagenome assemblies with Hi-C-based contact probability maps.

Burton JN, Liachko I, Dunham MJ, Shendure J.

G3 (Bethesda). 2014 May 22;4(7):1339-46. doi: 10.1534/g3.114.011825.

10.

Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions.

Burton JN, Adey A, Patwardhan RP, Qiu R, Kitzman JO, Shendure J.

Nat Biotechnol. 2013 Dec;31(12):1119-25. doi: 10.1038/nbt.2727. Epub 2013 Nov 3.

11.

Simultaneous digital quantification and fluorescence-based size characterization of massively parallel sequencing libraries.

Laurie MT, Bertout JA, Taylor SD, Burton JN, Shendure JA, Bielas JH.

Biotechniques. 2013 Aug;55(2):61-7. doi: 10.2144/000114063.

12.

The haplotype-resolved genome and epigenome of the aneuploid HeLa cancer cell line.

Adey A, Burton JN, Kitzman JO, Hiatt JB, Lewis AP, Martin BK, Qiu R, Lee C, Shendure J.

Nature. 2013 Aug 8;500(7461):207-11. doi: 10.1038/nature12064.

13.

Targeted enrichment and high-resolution digital profiling of mitochondrial DNA deletions in human brain.

Taylor SD, Ericson NG, Burton JN, Prolla TA, Silber JR, Shendure J, Bielas JH.

Aging Cell. 2014 Feb;13(1):29-38. doi: 10.1111/acel.12146. Epub 2013 Sep 11.

14.

Use of ultrasonic shears in the harvest of the free osteocutaneous fibula flap.

Burton JN, El-Deiry MW.

Ann Otol Rhinol Laryngol. 2011 Sep;120(9):563-8.

PMID:
22032068
15.

High-quality draft assemblies of mammalian genomes from massively parallel sequence data.

Gnerre S, Maccallum I, Przybylski D, Ribeiro FJ, Burton JN, Walker BJ, Sharpe T, Hall G, Shea TP, Sykes S, Berlin AM, Aird D, Costello M, Daza R, Williams L, Nicol R, Gnirke A, Nusbaum C, Lander ES, Jaffe DB.

Proc Natl Acad Sci U S A. 2011 Jan 25;108(4):1513-8. doi: 10.1073/pnas.1017351108. Epub 2010 Dec 27.

16.

Agreement between prehospital and emergency department glasgow coma scores.

Kerby JD, MacLennan PA, Burton JN, McGwin G Jr, Rue LW 3rd.

J Trauma. 2007 Nov;63(5):1026-31.

PMID:
17993947

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