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Items: 1 to 50 of 258

1.

Mediterranean grassland soil C-N compound turnover is dependent on rainfall and depth, and is mediated by genomically divergent microorganisms.

Diamond S, Andeer PF, Li Z, Crits-Christoph A, Burstein D, Anantharaman K, Lane KR, Thomas BC, Pan C, Northen TR, Banfield JF.

Nat Microbiol. 2019 May 20. doi: 10.1038/s41564-019-0449-y. [Epub ahead of print]

PMID:
31110364
2.

Preoperative Clinical and Echocardiographic Factors Associated with Surgical Timing and Outcomes in Primary Repair of Common Atrioventricular Canal Defect.

Burstein DS, Gray PE, Griffis HM, Glatz AC, Cohen MS, Gaynor JW, Goldberg DJ.

Pediatr Cardiol. 2019 Jun;40(5):1057-1063. doi: 10.1007/s00246-019-02116-0. Epub 2019 May 7.

PMID:
31065759
3.

Sodium MRI revisited.

Burstein D, Springer CS Jr.

Magn Reson Med. 2019 Aug;82(2):521-524. doi: 10.1002/mrm.27738. Epub 2019 Mar 29. No abstract available.

PMID:
30927278
4.

Author Correction: Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria.

Matheus Carnevali PB, Schulz F, Castelle CJ, Kantor RS, Shih PM, Sharon I, Santini JM, Olm MR, Amano Y, Thomas BC, Anantharaman K, Burstein D, Becraft ED, Stepanauskas R, Woyke T, Banfield JF.

Nat Commun. 2019 Mar 26;10(1):1451. doi: 10.1038/s41467-019-09423-3.

5.

Cardiopulmonary Exercise Testing-A Valuable Tool, Not Gatekeeper When Referring Patients With Adult Congenital Heart Disease for Transplant Evaluation.

Menachem JN, Reza N, Mazurek JA, Burstein D, Birati EY, Fox A, Kim YY, Molina M, Partington SL, Tanna M, Tobin L, Wald J, Goldberg LR.

World J Pediatr Congenit Heart Surg. 2019 May;10(3):286-291. doi: 10.1177/2150135118825263. Epub 2019 Mar 4.

PMID:
30832541
6.

Beliefs Associated with Pharmacy-Based Naloxone: a Qualitative Study of Pharmacy-Based Naloxone Purchasers and People at Risk for Opioid Overdose.

Donovan E, Case P, Bratberg JP, Baird J, Burstein D, Walley AY, Green TC.

J Urban Health. 2019 Jun;96(3):367-378. doi: 10.1007/s11524-019-00349-1.

PMID:
30747371
7.

A Functional Mini-Integrase in a Two-Protein-type V-C CRISPR System.

Wright AV, Wang JY, Burstein D, Harrington LB, Paez-Espino D, Kyrpides NC, Iavarone AT, Banfield JF, Doudna JA.

Mol Cell. 2019 Feb 21;73(4):727-737.e3. doi: 10.1016/j.molcel.2018.12.015. Epub 2019 Jan 29.

PMID:
30709710
8.

Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria.

Matheus Carnevali PB, Schulz F, Castelle CJ, Kantor RS, Shih PM, Sharon I, Santini JM, Olm MR, Amano Y, Thomas BC, Anantharaman K, Burstein D, Becraft ED, Stepanauskas R, Woyke T, Banfield JF.

Nat Commun. 2019 Jan 28;10(1):463. doi: 10.1038/s41467-018-08246-y. Erratum in: Nat Commun. 2019 Mar 26;10(1):1451.

9.

Pulmonary lung Doppler signals: normative data in a pediatric population compared with adults.

Burstein DS, Hopper RK, McCarthy EK, Hall K, Schatzberger R, Palti Y, Feinstein JA.

J Clin Monit Comput. 2019 Jan 19. doi: 10.1007/s10877-019-00258-3. [Epub ahead of print]

PMID:
30661196
10.

Significant mortality, morbidity and resource utilization associated with advanced heart failure in congenital heart disease in children and young adults.

Burstein DS, Shamszad P, Dai D, Almond CS, Price JF, Lin KY, O'Connor MJ, Shaddy RE, Mascio CE, Rossano JW.

Am Heart J. 2019 Mar;209:9-19. doi: 10.1016/j.ahj.2018.11.010. Epub 2018 Dec 5.

PMID:
30639612
11.

Mortality, Resource Utilization, and Inpatient Costs Vary Among Pediatric Heart Transplant Indications: A Merged Data Set Analysis From the United Network for Organ Sharing and Pediatric Health Information Systems Databases.

Burstein DS, Li Y, Getz KD, Huang YV, Rossano JW, O'Connor MJ, Lin KY, Aplenc R.

J Card Fail. 2019 Jan;25(1):27-35. doi: 10.1016/j.cardfail.2018.11.014. Epub 2018 Nov 25.

PMID:
30485789
12.

Strategically Guiding Research through Careful Consideration of the Path to Impact.

Burstein D, Mitchell R, Gray ML.

Radiology. 2019 Jan;290(1):5-7. doi: 10.1148/radiol.2018181475. Epub 2018 Nov 20. No abstract available.

PMID:
30457476
13.

Programmed DNA destruction by miniature CRISPR-Cas14 enzymes.

Harrington LB, Burstein D, Chen JS, Paez-Espino D, Ma E, Witte IP, Cofsky JC, Kyrpides NC, Banfield JF, Doudna JA.

Science. 2018 Nov 16;362(6416):839-842. doi: 10.1126/science.aav4294. Epub 2018 Oct 18.

PMID:
30337455
14.

Cardiac Profile of Chimeric Antigen Receptor T Cell Therapy in Children: A Single-Institution Experience.

Burstein DS, Maude S, Grupp S, Griffis H, Rossano J, Lin K.

Biol Blood Marrow Transplant. 2018 Aug;24(8):1590-1595. doi: 10.1016/j.bbmt.2018.05.014. Epub 2018 May 14.

PMID:
29772353
15.

Successful merging of data from the United Network for Organ Sharing and the Pediatric Health Information System databases.

Getz KD, He C, Li Y, Huang YV, Burstein DS, Rossano J, Aplenc R.

Pediatr Transplant. 2018 Aug;22(5):e13168. doi: 10.1111/petr.13168. Epub 2018 Apr 10.

PMID:
29635813
16.

Novel Microbial Diversity and Functional Potential in the Marine Mammal Oral Microbiome.

Dudek NK, Sun CL, Burstein D, Kantor RS, Aliaga Goltsman DS, Bik EM, Thomas BC, Banfield JF, Relman DA.

Curr Biol. 2017 Dec 18;27(24):3752-3762.e6. doi: 10.1016/j.cub.2017.10.040. Epub 2017 Nov 16.

17.

Conflating Medical Care With Patient Care.

Burstein DS.

J Grad Med Educ. 2017 Oct;9(5):671. doi: 10.4300/JGME-D-17-00458.1. No abstract available.

18.

RNA Targeting by Functionally Orthogonal Type VI-A CRISPR-Cas Enzymes.

East-Seletsky A, O'Connell MR, Burstein D, Knott GJ, Doudna JA.

Mol Cell. 2017 May 4;66(3):373-383.e3. doi: 10.1016/j.molcel.2017.04.008.

19.

Child Passenger Safety Technician Consultation in the Pediatric Primary Care Setting.

Burstein D, Zonfrillo MR, Baird J, Mello MJ.

Clin Pediatr (Phila). 2017 Sep;56(10):928-933. doi: 10.1177/0009922817706146. Epub 2017 Apr 26.

PMID:
28443338
20.

The Things We Take for Granted.

Burstein DS.

Acad Med. 2017 May;92(5):575. doi: 10.1097/ACM.0000000000001657. No abstract available.

PMID:
28441195
21.

Retroelement-guided protein diversification abounds in vast lineages of Bacteria and Archaea.

Paul BG, Burstein D, Castelle CJ, Handa S, Arambula D, Czornyj E, Thomas BC, Ghosh P, Miller JF, Banfield JF, Valentine DL.

Nat Microbiol. 2017 Apr 3;2:17045. doi: 10.1038/nmicrobiol.2017.45.

22.

Potential for microbial H2 and metal transformations associated with novel bacteria and archaea in deep terrestrial subsurface sediments.

Hernsdorf AW, Amano Y, Miyakawa K, Ise K, Suzuki Y, Anantharaman K, Probst A, Burstein D, Thomas BC, Banfield JF.

ISME J. 2017 Aug;11(8):1915-1929. doi: 10.1038/ismej.2017.39. Epub 2017 Mar 28.

23.

Defining the surgical margins of adenoid cystic carcinoma and their impact on outcome: An international collaborative study.

Amit M, Na'ara S, Trejo-Leider L, Ramer N, Burstein D, Yue M, Miles B, Yang X, Lei D, Bjoerndal K, Godballe C, Mücke T, Wolff KD, Eckardt AM, Copelli C, Sesenna E, Patel S, Ganly I, Gil Z.

Head Neck. 2017 May;39(5):1008-1014. doi: 10.1002/hed.24740. Epub 2017 Mar 2.

24.

Perpetuating stigma or reducing risk? Perspectives from naloxone consumers and pharmacists on pharmacy-based naloxone in 2 states.

Green TC, Case P, Fiske H, Baird J, Cabral S, Burstein D, Schwartz V, Potter N, Walley AY, Bratberg J.

J Am Pharm Assoc (2003). 2017 Mar - Apr;57(2S):S19-S27.e4. doi: 10.1016/j.japh.2017.01.013. Epub 2017 Feb 14.

PMID:
28214219
25.

The Parasternal Short-Axis View Improves Diagnostic Accuracy for Inferior Sinus Venosus Type of Atrial Septal Defects by Transthoracic Echocardiography.

Snarr BS, Liu MY, Zuckerberg JC, Falkensammer CB, Nadaraj S, Burstein D, Ho D, Gardner MA, Butto A, Ewing SG, Pandian NG, Banerjee A.

J Am Soc Echocardiogr. 2017 Mar;30(3):209-215. doi: 10.1016/j.echo.2016.12.007. Epub 2017 Jan 27.

26.

Identical bacterial populations colonize premature infant gut, skin, and oral microbiomes and exhibit different in situ growth rates.

Olm MR, Brown CT, Brooks B, Firek B, Baker R, Burstein D, Soenjoyo K, Thomas BC, Morowitz M, Banfield JF.

Genome Res. 2017 Apr;27(4):601-612. doi: 10.1101/gr.213256.116. Epub 2017 Jan 10.

27.

New CRISPR-Cas systems from uncultivated microbes.

Burstein D, Harrington LB, Strutt SC, Probst AJ, Anantharaman K, Thomas BC, Doudna JA, Banfield JF.

Nature. 2017 Feb 9;542(7640):237-241. doi: 10.1038/nature21059. Epub 2016 Dec 22.

28.

Two distinct RNase activities of CRISPR-C2c2 enable guide-RNA processing and RNA detection.

East-Seletsky A, O'Connell MR, Knight SC, Burstein D, Cate JH, Tjian R, Doudna JA.

Nature. 2016 Oct 13;538(7624):270-273. doi: 10.1038/nature19802. Epub 2016 Sep 26.

29.

Ultrasound guided FNA of thyroid performed by cytopathologists enhances Bethesda diagnostic value.

Wu M, Choi Y, Zhang Z, Si Q, Salem F, Szporn A, Zhang D, Burstein D, Teng M, Miles BA, Genden E.

Diagn Cytopathol. 2016 Oct;44(10):787-91. doi: 10.1002/dc.23544. Epub 2016 Jul 26.

PMID:
27456076
30.

MRSA Causing Infections in Hospitals in Greater Metropolitan New York: Major Shift in the Dominant Clonal Type between 1996 and 2014.

Pardos de la Gandara M, Curry M, Berger J, Burstein D, Della-Latta P, Kopetz V, Quale J, Spitzer E, Tan R, Urban C, Wang G, Whittier S, de Lencastre H, Tomasz A.

PLoS One. 2016 Jun 7;11(6):e0156924. doi: 10.1371/journal.pone.0156924. eCollection 2016.

31.

Genomic resolution of a cold subsurface aquifer community provides metabolic insights for novel microbes adapted to high CO2 concentrations.

Probst AJ, Castelle CJ, Singh A, Brown CT, Anantharaman K, Sharon I, Hug LA, Burstein D, Emerson JB, Thomas BC, Banfield JF.

Environ Microbiol. 2017 Feb;19(2):459-474. doi: 10.1111/1462-2920.13362. Epub 2016 Jul 7.

PMID:
27112493
32.

A Tissue-Penetrating Double Network Restores the Mechanical Properties of Degenerated Articular Cartilage.

Cooper BG, Stewart RC, Burstein D, Snyder BD, Grinstaff MW.

Angew Chem Int Ed Engl. 2016 Mar 18;55(13):4226-30. doi: 10.1002/anie.201511767. Epub 2016 Mar 2.

33.

ZBTB16: a novel sensitive and specific biomarker for yolk sac tumor.

Xiao GQ, Li F, Unger PD, Katerji H, Yang Q, McMahon L, Burstein DE.

Mod Pathol. 2016 Jun;29(6):591-8. doi: 10.1038/modpathol.2016.46. Epub 2016 Feb 26.

34.

Analysis of five complete genome sequences for members of the class Peribacteria in the recently recognized Peregrinibacteria bacterial phylum.

Anantharaman K, Brown CT, Burstein D, Castelle CJ, Probst AJ, Thomas BC, Williams KH, Banfield JF.

PeerJ. 2016 Jan 28;4:e1607. doi: 10.7717/peerj.1607. eCollection 2016.

35.

Major bacterial lineages are essentially devoid of CRISPR-Cas viral defence systems.

Burstein D, Sun CL, Brown CT, Sharon I, Anantharaman K, Probst AJ, Thomas BC, Banfield JF.

Nat Commun. 2016 Feb 3;7:10613. doi: 10.1038/ncomms10613.

36.

Genomic analysis of 38 Legionella species identifies large and diverse effector repertoires.

Burstein D, Amaro F, Zusman T, Lifshitz Z, Cohen O, Gilbert JA, Pupko T, Shuman HA, Segal G.

Nat Genet. 2016 Feb;48(2):167-75. doi: 10.1038/ng.3481. Epub 2016 Jan 11.

37.

Fine-needle aspiration of small pulmonary nodules yields material for reliable molecular analysis of adenocarcinomas.

Grunes D, Yankelevitz D, Beasley MB, Burstein D, Zhang D, Ye F, Szporn A, Si Q, Zhang Z, El Salem F, Wu M.

J Am Soc Cytopathol. 2016 Mar - Apr;5(2):57-63. doi: 10.1016/j.jasc.2015.11.003. Epub 2015 Nov 14.

PMID:
31042492
38.

Many paths to parity for women in science.

Burstein D, Hall-Craggs M, Tempany C.

Science. 2015 Oct 16;350(6258):286. doi: 10.1126/science.350.6258.286-a. No abstract available.

PMID:
26472899
39.

Down-regulation of cytoplasmic PLZF correlates with high tumor grade and tumor aggression in non-small cell lung carcinoma.

Xiao GQ, Li F, Findeis-Hosey J, Hyrien O, Unger PD, Xiao L, Dunne R, Kim ES, Yang Q, McMahon L, Burstein DE.

Hum Pathol. 2015 Nov;46(11):1607-15. doi: 10.1016/j.humpath.2015.06.021. Epub 2015 Jul 8.

PMID:
26297253
40.

Identification of novel Xanthomonas euvesicatoria type III effector proteins by a machine-learning approach.

Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G.

Mol Plant Pathol. 2016 Apr;17(3):398-411. doi: 10.1111/mpp.12288. Epub 2015 Aug 15.

PMID:
26104875
41.

Loss of PLZF expression in prostate cancer by immunohistochemistry correlates with tumor aggressiveness and metastasis.

Xiao GQ, Unger P, Yang Q, Kinoshita Y, Singh K, McMahon L, Nastiuk K, Sha K, Krolewski J, Burstein D.

PLoS One. 2015 Mar 25;10(3):e0121318. doi: 10.1371/journal.pone.0121318. eCollection 2015.

42.

Novel type III effectors in Pseudomonas aeruginosa.

Burstein D, Satanower S, Simovitch M, Belnik Y, Zehavi M, Yerushalmi G, Ben-Aroya S, Pupko T, Banin E.

MBio. 2015 Mar 17;6(2):e00161. doi: 10.1128/mBio.00161-15.

43.

Accurate, multi-kb reads resolve complex populations and detect rare microorganisms.

Sharon I, Kertesz M, Hug LA, Pushkarev D, Blauwkamp TA, Castelle CJ, Amirebrahimi M, Thomas BC, Burstein D, Tringe SG, Williams KH, Banfield JF.

Genome Res. 2015 Apr;25(4):534-43. doi: 10.1101/gr.183012.114. Epub 2015 Feb 9.

44.

Histone H1.5, a novel prostatic cancer marker: an immunohistochemical study.

Khachaturov V, Xiao GQ, Kinoshita Y, Unger PD, Burstein DE.

Hum Pathol. 2014 Oct;45(10):2115-9. doi: 10.1016/j.humpath.2014.06.015. Epub 2014 Jul 3.

PMID:
25130394
45.

Expression of H1.5 and PLZF in granulosa cell tumors and normal ovarian tissues: a short report.

Momeni M, Kalir T, Farag S, Chuang L, Fishman D, Burstein DE.

Cell Oncol (Dordr). 2014 Jun;37(3):229-34. doi: 10.1007/s13402-014-0174-8. Epub 2014 Jul 15.

PMID:
25023763
46.

Identification of novel Coxiella burnetii Icm/Dot effectors and genetic analysis of their involvement in modulating a mitogen-activated protein kinase pathway.

Lifshitz Z, Burstein D, Schwartz K, Shuman HA, Pupko T, Segal G.

Infect Immun. 2014 Sep;82(9):3740-52. doi: 10.1128/IAI.01729-14. Epub 2014 Jun 23.

47.

MR diffusion is sensitive to mechanical loading in human intervertebral disks ex vivo.

Alkalay RN, Burstein D, Westin CF, Meier D, Hackney DB.

J Magn Reson Imaging. 2015 Mar;41(3):654-64. doi: 10.1002/jmri.24624. Epub 2014 Jun 3.

PMID:
24889510
48.

Immunohistochemical detection of promyelocytic leukemia zinc finger and histone 1.5 in uterine leiomyosarcoma and leiomyoma.

Momeni M, Kalir T, Farag S, Kinoshita Y, Roman TY, Chuang L, Fishman DA, Burstein DE.

Reprod Sci. 2014 Sep;21(9):1171-6. doi: 10.1177/1933719114532845. Epub 2014 Apr 30.

49.

Delayed gadolinium-enhanced magnetic resonance imaging of medial tibiofemoral cartilage and its relationship with meniscal pathology: a longitudinal study using 3.0T magnetic resonance imaging.

Crema MD, Hunter DJ, Burstein D, Roemer FW, Li L, Krishnan N, Marra MD, Hellio Le-Graverand MP, Guermazi A.

Arthritis Rheumatol. 2014 Jun;66(6):1517-24. doi: 10.1002/art.38518.

50.

DNA motifs determining the efficiency of adaptation into the Escherichia coli CRISPR array.

Yosef I, Shitrit D, Goren MG, Burstein D, Pupko T, Qimron U.

Proc Natl Acad Sci U S A. 2013 Aug 27;110(35):14396-401. doi: 10.1073/pnas.1300108110. Epub 2013 Aug 12.

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