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Items: 1 to 50 of 321

1.

Structural Elucidation of Bisulfite Adducts to Pseudouridine That Result in Deletion Signatures during Reverse Transcription of RNA.

Fleming AM, Alenko A, Kitt JP, Orendt AM, Flynn PF, Harris JM, Burrows CJ.

J Am Chem Soc. 2019 Oct 2. doi: 10.1021/jacs.9b08630. [Epub ahead of print]

PMID:
31538776
2.

Human NEIL3 Gene Expression Regulated by Epigenetic-Like Oxidative DNA Modification.

Fleming AM, Zhu J, Howpay Manage SA, Burrows CJ.

J Am Chem Soc. 2019 Jul 17;141(28):11036-11049. doi: 10.1021/jacs.9b01847. Epub 2019 Jul 8.

3.

Impact of Critical Event Checklists on Anaesthetist Performance in Simulated Operating Theatre Emergencies.

Siddiqui A, Ng E, Burrows C, McLuckie D, Everett T.

Cureus. 2019 Apr 3;11(4):e4376. doi: 10.7759/cureus.4376.

4.

Computational Study of the Formation of C8, C5, and C4 Guanine:Lysine Adducts via Oxidation of Guanine by Sulfate Radical Anion.

Thapa B, Hebert SP, Munk BH, Burrows CJ, Schlegel HB.

J Phys Chem A. 2019 Jun 20;123(24):5150-5163. doi: 10.1021/acs.jpca.9b03598. Epub 2019 Jun 6.

PMID:
31140806
5.

Synthesis of Site-Specific Crown Ether Adducts to DNA Abasic Sites: 8-Oxo-7,8-Dihydro-2'-Deoxyguanosine and 2'-Deoxycytidine.

An N, Fleming AM, Rosecrans NC, Liao Y, Burrows CJ.

Methods Mol Biol. 2019;1973:15-25. doi: 10.1007/978-1-4939-9216-4_2.

PMID:
31016693
6.

Comparison of Pulmonary Function Decline in Steroid-Treated and Steroid-Naïve Patients with Duchenne Muscular Dystrophy.

Sawnani H, Horn PS, Wong B, Darmahkasih A, Rybalsky I, Shellenbarger KC, Tian C, Rutter MM, Simakajornboon N, Amin R, Gurbani N, Pascoe J, Burrows C, Khirani S, Amaddeo A, Fauroux B.

J Pediatr. 2019 Jul;210:194-200.e2. doi: 10.1016/j.jpeds.2019.02.037. Epub 2019 Apr 5.

PMID:
30955791
7.

Location dependence of the transcriptional response of a potential G-quadruplex in gene promoters under oxidative stress.

Fleming AM, Zhu J, Ding Y, Burrows CJ.

Nucleic Acids Res. 2019 Jun 4;47(10):5049-5060. doi: 10.1093/nar/gkz207.

8.

Transcriptome-wide profiling of multiple RNA modifications simultaneously at single-base resolution.

Khoddami V, Yerra A, Mosbruger TL, Fleming AM, Burrows CJ, Cairns BR.

Proc Natl Acad Sci U S A. 2019 Apr 2;116(14):6784-6789. doi: 10.1073/pnas.1817334116. Epub 2019 Mar 14. Erratum in: Proc Natl Acad Sci U S A. 2019 Apr 30;116(18):9136.

9.

Colocalization of m6A and G-Quadruplex-Forming Sequences in Viral RNA (HIV, Zika, Hepatitis B, and SV40) Suggests Topological Control of Adenosine N 6-Methylation.

Fleming AM, Nguyen NLB, Burrows CJ.

ACS Cent Sci. 2019 Feb 27;5(2):218-228. doi: 10.1021/acscentsci.8b00963. Epub 2019 Feb 4. Review.

10.

Oxidative Modification of Guanine in a Potential Z-DNA-Forming Sequence of a Gene Promoter Impacts Gene Expression.

Fleming AM, Zhu J, Ding Y, Esders S, Burrows CJ.

Chem Res Toxicol. 2019 May 20;32(5):899-909. doi: 10.1021/acs.chemrestox.9b00041. Epub 2019 Mar 7.

PMID:
30821442
11.

Impact of DNA Oxidation on Toxicology: From Quantification to Genomics.

Wu J, Sturla SJ, Burrows CJ, Fleming AM.

Chem Res Toxicol. 2019 Mar 18;32(3):345-347. doi: 10.1021/acs.chemrestox.9b00046. Epub 2019 Feb 26.

PMID:
30807111
12.

Investigating functional brain network integrity using a traditional and novel categorical scheme for neurodevelopmental disorders.

Dajani DR, Burrows CA, Odriozola P, Baez A, Nebel MB, Mostofsky SH, Uddin LQ.

Neuroimage Clin. 2019;21:101678. doi: 10.1016/j.nicl.2019.101678. Epub 2019 Jan 17.

13.

Oxidative Modification of the Potential G-Quadruplex Sequence in the PCNA Gene Promoter Can Turn on Transcription.

Redstone SCJ, Fleming AM, Burrows CJ.

Chem Res Toxicol. 2019 Mar 18;32(3):437-446. doi: 10.1021/acs.chemrestox.8b00332. Epub 2019 Jan 14.

PMID:
30604962
14.

Atypical frontoamygdala functional connectivity in youth with autism.

Odriozola P, Dajani DR, Burrows CA, Gabard-Durnam LJ, Goodman E, Baez AC, Tottenham N, Uddin LQ, Gee DG.

Dev Cogn Neurosci. 2019 Jun;37:100603. doi: 10.1016/j.dcn.2018.12.001. Epub 2018 Dec 7.

15.

Effect of Oxidative Damage on Charge and Spin Transport in DNA.

Mishra S, Poonia VS, Fontanesi C, Naaman R, Fleming AM, Burrows CJ.

J Am Chem Soc. 2019 Jan 9;141(1):123-126. doi: 10.1021/jacs.8b12014. Epub 2018 Dec 17.

PMID:
30541275
16.

Plasma Fucosylated Glycans and C-Reactive Protein as Biomarkers of HNF1A-MODY in Young Adult-Onset Nonautoimmune Diabetes.

Juszczak A, Pavić T, Vučković F, Bennett AJ, Shah N, Pape Medvidović E, Groves CJ, Šekerija M, Chandler K, Burrows C, Rojnić Putarek N, Vučić Lovrenčić M, Ćuća Knežević J, James TJ, Gloyn AL, Lauc G, McCarthy MI, Owen KR, Gornik O.

Diabetes Care. 2019 Jan;42(1):17-26. doi: 10.2337/dc18-0422. Epub 2018 Nov 19.

PMID:
30455330
17.

Electrophysiological properties of human beta-cell lines EndoC-βH1 and -βH2 conform with human beta-cells.

Hastoy B, Godazgar M, Clark A, Nylander V, Spiliotis I, van de Bunt M, Chibalina MV, Barrett A, Burrows C, Tarasov AI, Scharfmann R, Gloyn AL, Rorsman P.

Sci Rep. 2018 Nov 19;8(1):16994. doi: 10.1038/s41598-018-34743-7.

18.

Characterization of G-Quadruplexes in Chlamydomonas reinhardtii and the Effects of Polyamine and Magnesium Cations on Structure and Stability.

Vinyard WA, Fleming AM, Ma J, Burrows CJ.

Biochemistry. 2018 Nov 27;57(47):6551-6561. doi: 10.1021/acs.biochem.8b00749. Epub 2018 Nov 15.

PMID:
30411886
19.
20.

γ-Hemolysin Nanopore Is Sensitive to Guanine-to-Inosine Substitutions in Double-Stranded DNA at the Single-Molecule Level.

Tan CS, Fleming AM, Ren H, Burrows CJ, White HS.

J Am Chem Soc. 2018 Oct 31;140(43):14224-14234. doi: 10.1021/jacs.8b08153. Epub 2018 Oct 16.

PMID:
30269492
21.

Rapid Screen of Potential i-Motif Forming Sequences in DNA Repair Gene Promoters.

Rogers RA, Fleming AM, Burrows CJ.

ACS Omega. 2018 Aug 31;3(8):9630-9635. doi: 10.1021/acsomega.8b01551. Epub 2018 Aug 21.

22.

The RAD17 Promoter Sequence Contains a Potential Tail-Dependent G-Quadruplex That Downregulates Gene Expression upon Oxidative Modification.

Zhu J, Fleming AM, Burrows CJ.

ACS Chem Biol. 2018 Sep 21;13(9):2577-2584. doi: 10.1021/acschembio.8b00522. Epub 2018 Aug 15.

23.

Unraveling the 4n - 1 rule for DNA i-motif stability: base pairs vs. loop lengths.

Fleming AM, Stewart KM, Eyring GM, Ball TE, Burrows CJ.

Org Biomol Chem. 2018 Jun 20;16(24):4537-4546. doi: 10.1039/c8ob01198b.

PMID:
29873385
24.

A longitudinal study on deep brain stimulation of the medial forebrain bundle for treatment-resistant depression.

Fenoy AJ, Schulz PE, Selvaraj S, Burrows CL, Zunta-Soares G, Durkin K, Zanotti-Fregonara P, Quevedo J, Soares JC.

Transl Psychiatry. 2018 Jun 4;8(1):111. doi: 10.1038/s41398-018-0160-4.

25.

Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes.

Knowles DA, Burrows CK, Blischak JD, Patterson KM, Serie DJ, Norton N, Ober C, Pritchard JK, Gilad Y.

Elife. 2018 May 8;7. pii: e33480. doi: 10.7554/eLife.33480.

26.

The Fifth Domain in the G-Quadruplex-Forming Sequence of the Human NEIL3 Promoter Locks DNA Folding in Response to Oxidative Damage.

Omaga CA, Fleming AM, Burrows CJ.

Biochemistry. 2018 May 22;57(20):2958-2970. doi: 10.1021/acs.biochem.8b00226. Epub 2018 May 10.

27.

Unusual Isothermal Hysteresis in DNA i-Motif pH Transitions: A Study of the RAD17 Promoter Sequence.

Rogers RA, Fleming AM, Burrows CJ.

Biophys J. 2018 Apr 24;114(8):1804-1815. doi: 10.1016/j.bpj.2018.03.012.

28.

Maturity onset diabetes of the young due to HNF1A variants in Croatia.

Pavić T, Juszczak A, Pape Medvidović E, Burrows C, Šekerija M, Bennett AJ, Ćuća Knežević J, Gloyn AL, Lauc G, McCarthy MI, Gornik O, Owen KR.

Biochem Med (Zagreb). 2018 Jun 15;28(2):020703. doi: 10.11613/BM.2018.020703. Epub 2018 Apr 15.

29.

A conserved transcriptional response to intranasal Ebola virus exposure in nonhuman primates prior to onset of fever.

Speranza E, Bixler SL, Altamura LA, Arnold CE, Pratt WD, Taylor-Howell C, Burrows C, Aguilar W, Rossi F, Shamblin JD, Wollen SE, Zelko JM, Minogue T, Nagle E, Palacios G, Goff AJ, Connor JH.

Sci Transl Med. 2018 Mar 28;10(434). pii: eaaq1016. doi: 10.1126/scitranslmed.aaq1016.

PMID:
29593102
30.

Single-Molecule Titration in a Protein Nanoreactor Reveals the Protonation/Deprotonation Mechanism of a C:C Mismatch in DNA.

Ren H, Cheyne CG, Fleming AM, Burrows CJ, White HS.

J Am Chem Soc. 2018 Apr 18;140(15):5153-5160. doi: 10.1021/jacs.8b00593. Epub 2018 Apr 3.

31.

Nanopore Analysis of the 5-Guanidinohydantoin to Iminoallantoin Isomerization in Duplex DNA.

Zeng T, Fleming AM, Ding Y, Ren H, White HS, Burrows CJ.

J Org Chem. 2018 Apr 6;83(7):3973-3978. doi: 10.1021/acs.joc.8b00317. Epub 2018 Mar 8.

32.

In-Game Health Communication: Delivering Low-Fear Health Messages in a Low-Fear Videogame.

Burrows CN, Blanton H.

Games Health J. 2018 Jun;7(3):182-187. doi: 10.1089/g4h.2017.0113. Epub 2018 Feb 8.

PMID:
29420056
33.

Integration of human pancreatic islet genomic data refines regulatory mechanisms at Type 2 Diabetes susceptibility loci.

Thurner M, van de Bunt M, Torres JM, Mahajan A, Nylander V, Bennett AJ, Gaulton KJ, Barrett A, Burrows C, Bell CG, Lowe R, Beck S, Rakyan VK, Gloyn AL, McCarthy MI.

Elife. 2018 Feb 7;7. pii: e31977. doi: 10.7554/eLife.31977.

34.

Accounts: 50 Years of a Great Idea.

Burrows CJ.

Acc Chem Res. 2018 Jan 16;51(1):1-2. doi: 10.1021/acs.accounts.7b00637. No abstract available.

PMID:
29334741
35.

Profiles and Correlates of Parent-Child Agreement on Social Anxiety Symptoms in Youth with Autism Spectrum Disorder.

Burrows CA, Usher LV, Becker-Haimes EM, McMahon CM, Mundy PC, Jensen-Doss A, Henderson HA.

J Autism Dev Disord. 2018 Jun;48(6):2023-2037. doi: 10.1007/s10803-018-3461-9.

PMID:
29332179
36.

Human DNA Repair Genes Possess Potential G-Quadruplex Sequences in Their Promoters and 5'-Untranslated Regions.

Fleming AM, Zhu J, Ding Y, Visser JA, Zhu J, Burrows CJ.

Biochemistry. 2018 Feb 13;57(6):991-1002. doi: 10.1021/acs.biochem.7b01172. Epub 2018 Jan 24.

37.

Impact of regulatory variation across human iPSCs and differentiated cells.

Banovich NE, Li YI, Raj A, Ward MC, Greenside P, Calderon D, Tung PY, Burnett JE, Myrthil M, Thomas SM, Burrows CK, Romero IG, Pavlovic BJ, Kundaje A, Pritchard JK, Gilad Y.

Genome Res. 2018 Jan;28(1):122-131. doi: 10.1101/gr.224436.117. Epub 2017 Dec 5.

38.

Metaperception in Adolescents With and Without Autism Spectrum Disorder.

Usher LV, Burrows CA, Messinger DS, Henderson HA.

J Autism Dev Disord. 2018 Feb;48(2):533-548. doi: 10.1007/s10803-017-3356-1.

39.

Holy Grails in Chemistry, Part II.

Burrows CJ.

Acc Chem Res. 2017 Mar 21;50(3):445. doi: 10.1021/acs.accounts.7b00102. No abstract available.

PMID:
28945398
40.
41.
42.

8-Oxo-7,8-dihydroguanine in the Context of a Gene Promoter G-Quadruplex Is an On-Off Switch for Transcription.

Fleming AM, Zhu J, Ding Y, Burrows CJ.

ACS Chem Biol. 2017 Sep 15;12(9):2417-2426. doi: 10.1021/acschembio.7b00636. Epub 2017 Aug 28.

43.

Sequencing DNA for the Oxidatively Modified Base 8-Oxo-7,8-Dihydroguanine.

Fleming AM, Ding Y, Burrows CJ.

Methods Enzymol. 2017;591:187-210. doi: 10.1016/bs.mie.2017.03.004. Epub 2017 Apr 7.

44.

8-Oxo-7,8-dihydroguanine, friend and foe: Epigenetic-like regulator versus initiator of mutagenesis.

Fleming AM, Burrows CJ.

DNA Repair (Amst). 2017 Aug;56:75-83. doi: 10.1016/j.dnarep.2017.06.009. Epub 2017 Jun 9. Review.

45.

Putative Brain Networks Underlying Repetitive Negative Thinking and Comorbid Internalizing Problems in Autism.

Burrows CA, Timpano KR, Uddin LQ.

Clin Psychol Sci. 2017 May;5(3):522-536. doi: 10.1177/2167702616683506. Epub 2017 Apr 26.

46.

Leaving my father.

Burrows C.

Med J Aust. 2017 Apr 17;206(7):291. No abstract available.

PMID:
28403758
47.

4n-1 Is a "Sweet Spot" in DNA i-Motif Folding of 2'-Deoxycytidine Homopolymers.

Fleming AM, Ding Y, Rogers RA, Zhu J, Zhu J, Burton AD, Carlisle CB, Burrows CJ.

J Am Chem Soc. 2017 Apr 5;139(13):4682-4689. doi: 10.1021/jacs.6b10117. Epub 2017 Mar 21.

PMID:
28290680
48.

Computational Study of Oxidation of Guanine by Singlet Oxygen (1 Δg ) and Formation of Guanine:Lysine Cross-Links.

Thapa B, Munk BH, Burrows CJ, Schlegel HB.

Chemistry. 2017 Apr 27;23(24):5804-5813. doi: 10.1002/chem.201700231. Epub 2017 Apr 5.

PMID:
28249102
49.

Interrogation of Base Pairing of the Spiroiminodihydantoin Diastereomers Using the α-Hemolysin Latch.

Zeng T, Fleming AM, Ding Y, White HS, Burrows CJ.

Biochemistry. 2017 Mar 21;56(11):1596-1603. doi: 10.1021/acs.biochem.6b01175. Epub 2017 Mar 9.

50.

Spatial regularity of InAs-GaAs quantum dots: quantifying the dependence of lateral ordering on growth rate.

Konishi T, Clarke E, Burrows CW, Bomphrey JJ, Murray R, Bell GR.

Sci Rep. 2017 Feb 13;7:42606. doi: 10.1038/srep42606.

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