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Items: 1 to 50 of 304

1.

Breakpoint beware: reliance on historical breakpoints for Enterobacteriaceae leads to discrepancies in interpretation of susceptibility testing for carbapenems and cephalosporins and gaps in detection of carbapenem-resistant organisms.

Yarbrough ML, Wallace MA, Potter RF, D'Souza AW, Dantas G, Burnham CD.

Eur J Clin Microbiol Infect Dis. 2019 Nov 2. doi: 10.1007/s10096-019-03711-y. [Epub ahead of print]

PMID:
31679102
2.

Clinical Impact of Revised Cefepime Breakpoint in Patients With Enterobacteriaceae Bacteremia.

Foong KS, Carlson AL, Munigala S, Burnham CD, Warren DK.

Open Forum Infect Dis. 2019 Jul 28;6(8):ofz341. doi: 10.1093/ofid/ofz341. eCollection 2019 Aug.

3.

Comparison of Urine Antigen Assays for the Diagnosis of Histoplasma capsulatum Infection.

Persaud SP, Lawton T, Burnham CD, Anderson NW.

J Appl Lab Med. 2019 Nov;4(3):370-382. doi: 10.1373/jalm.2018.028910. Epub 2019 Jun 26.

PMID:
31659074
4.

Impact of an electronic hard-stop clinical decision support tool to limit repeat Clostridioides difficile toxin enzyme immunoassay testing on test utilization.

Kwon JH, Reske KA, Hink T, Jackups R, Burnham CD, Dubberke ER.

Infect Control Hosp Epidemiol. 2019 Oct 24:1-4. doi: 10.1017/ice.2019.275. [Epub ahead of print]

PMID:
31647044
5.

Best Practices for Detection of Bloodstream Infection.

Burnham CD, Yarbrough ML.

J Appl Lab Med. 2019 Jan;3(4):740-742. doi: 10.1373/jalm.2018.026260. No abstract available.

PMID:
31639745
6.

Clinical Effect of Expedited Pathogen Identification and Susceptibility Testing for Gram-Negative Bacteremia and Candidemia by Use of the Accelerate PhenoTM System.

Burnham JP, Wallace MA, Fuller BM, Shupe A, Burnham CD, Kollef MH.

J Appl Lab Med. 2019 Jan;3(4):569-579. doi: 10.1373/jalm.2018.027201. Epub 2018 Nov 30.

PMID:
31639726
7.

Pediatric Anaerobic Blood Culture Practices in Industrialized Countries.

Thé T, Curfman A, Burnham CD, Hayes E, Schnadower D; with the Pediatric Emergency Medicine Collaborative Research Committee (PEM-CRC).

J Appl Lab Med. 2019 Jan;3(4):553-558. doi: 10.1373/jalm.2018.027128. Epub 2018 Dec 7.

PMID:
31639724
8.

Lack of Additional Diagnostic Yield of 16s rRNA Gene PCR for Prosthetic Joint Infections.

Lane MA, Ganeshraj N, Gu A, Warren DK, Burnham CD.

J Appl Lab Med. 2019 Sep;4(2):224-228. doi: 10.1373/jalm.2018.027003. Epub 2019 Feb 26.

PMID:
31639667
9.

Multicenter clinical evaluation of ETEST® Meropenem/Vaborbactam (bioMérieux) for susceptibility testing of Enterobacterales (Enterobacteriaceae) and Pseudomonas aeruginosa.

Jean S, Garrett S, Anglade C, Bridon L, Davies L, Garner OB, Richards J, Wallace M, Wootton M, Burnham CA.

J Clin Microbiol. 2019 Oct 16. pii: JCM.01205-19. doi: 10.1128/JCM.01205-19. [Epub ahead of print]

PMID:
31619532
10.

Multicenter Study Demonstrates Standardization Requirements for Mold Identification by MALDI-TOF MS.

Lau AF, Walchak RC, Miller HB, Slechta ES, Kamboj K, Riebe K, Robertson AE, Gilbreath JJ, Mitchell KF, Wallace MA, Bryson AL, Balada-Llasat JM, Bulman A, Buchan BW, Burnham CD, Butler-Wu S, Desai U, Doern CD, Hanson KE, Henderson CM, Kostrzewa M, Ledeboer NA, Maier T, Pancholi P, Schuetz AN, Shi G, Wengenack NL, Zhang SX, Zelazny AM, Frank KM.

Front Microbiol. 2019 Sep 20;10:2098. doi: 10.3389/fmicb.2019.02098. eCollection 2019.

11.

Multicentre evaluation of the new ETEST gradient diffusion method for piperacillin-tazobactam susceptibility testing of Enterobacterales, Pseudomonas aeruginosa and Acinetobacter baumannii complex.

García-Fernandez S, Bala Y, Armstrong T, Garcia-Castillo M, Burnham CA, Wallace MA, Hardy D, Zambardi G, Canton R.

J Clin Microbiol. 2019 Oct 9. pii: JCM.01042-19. doi: 10.1128/JCM.01042-19. [Epub ahead of print]

PMID:
31597745
12.

Spatiotemporal dynamics of multidrug resistant bacteria on intensive care unit surfaces.

D'Souza AW, Potter RF, Wallace M, Shupe A, Patel S, Sun X, Gul D, Kwon JH, Andleeb S, Burnham CD, Dantas G.

Nat Commun. 2019 Oct 8;10(1):4569. doi: 10.1038/s41467-019-12563-1.

13.

Total Laboratory Automation: a Micro-Comic Strip.

Burnham CA, McAdam AJ.

J Clin Microbiol. 2019 Sep 24;57(10). pii: e01036-19. doi: 10.1128/JCM.01036-19. Print 2019 Oct. No abstract available.

PMID:
31551342
14.

Phenotypic and genotypic characterization of linezolid-resistant Enterococcus faecium from the USA and Pakistan.

Wardenburg KE, Potter RF, D'Souza AW, Hussain T, Wallace MA, Andleeb S, Burnham CD, Dantas G.

J Antimicrob Chemother. 2019 Dec 1;74(12):3445-3452. doi: 10.1093/jac/dkz367.

PMID:
31504566
15.

Evaluation of Oxacillin and Cefoxitin Disk Diffusion and Microbroth Dilution Methods for Detecting mecA-mediated β-lactam Resistance in Contemporary Staphylococcus epidermidis Isolates.

Naccache SN, Callan K, Burnham CA, Wallace MA, Westblade LF, Dien Bard J; Staphylococcus Ad Hoc Working Group of the CLSI Antimicrobial Susceptibility Testing Subcommittee.

J Clin Microbiol. 2019 Aug 28. pii: JCM.00961-19. doi: 10.1128/JCM.00961-19. [Epub ahead of print]

PMID:
31462553
16.

In Silico Analysis of Gardnerella Genomospecies Detected in the Setting of Bacterial Vaginosis.

Potter RF, Burnham CD, Dantas G.

Clin Chem. 2019 Nov;65(11):1375-1387. doi: 10.1373/clinchem.2019.305474. Epub 2019 Aug 28.

PMID:
31462445
17.

Comparative Genomics of Antibiotic-Resistant Uropathogens Implicates Three Routes for Recurrence of Urinary Tract Infections.

Thänert R, Reske KA, Hink T, Wallace MA, Wang B, Schwartz DJ, Seiler S, Cass C, Burnham CA, Dubberke ER, Kwon JH, Dantas G.

MBio. 2019 Aug 27;10(4). pii: e01977-19. doi: 10.1128/mBio.01977-19.

18.

Evaluation of telavancin susceptibility in isolates of Staphylococcus aureus with reduced susceptibility to vancomycin.

McMullen AR, Lainhart W, Wallace MA, Shupe A, Burnham CD.

Eur J Clin Microbiol Infect Dis. 2019 Dec;38(12):2323-2330. doi: 10.1007/s10096-019-03683-z. Epub 2019 Aug 24.

PMID:
31446513
19.

Metabolomic networks connect host-microbiome processes to human Clostridioides difficile infections.

Robinson JI, Weir WH, Crowley JR, Hink T, Reske KA, Kwon JH, Burnham CD, Dubberke ER, Mucha PJ, Henderson JP.

J Clin Invest. 2019 Aug 12;130:3792-3806. doi: 10.1172/JCI126905. eCollection 2019 Aug 12.

20.

Incidence and Diagnostic Yield of Repeat Urine Culture in Hospitalized Patients: an Opportunity for Diagnostic Stewardship.

Foong KS, Munigala S, Jackups R Jr, Yarbrough ML, Burnham CA, Warren DK.

J Clin Microbiol. 2019 Sep 24;57(10). pii: e00910-19. doi: 10.1128/JCM.00910-19. Print 2019 Oct.

PMID:
31391227
21.

Genotypic and Phenotypic Characterization of Antimicrobial Resistance in Neisseria gonorrhoeae: a Cross-Sectional Study of Isolates Recovered from Routine Urine Cultures in a High-Incidence Setting.

Bailey AL, Potter RF, Wallace MA, Johnson C, Dantas G, Burnham CA.

mSphere. 2019 Jul 24;4(4). pii: e00373-19. doi: 10.1128/mSphere.00373-19.

22.

Clinical Utility of Advanced Microbiology Testing Tools.

Miller MB, Atrzadeh F, Burnham CA, Cavalieri S, Dunn J, Jones S, Mathews C, McNult P, Meduri J, Newhouse C, Newton D, Oberholzer M, Osiecki J, Pedersen D, Sweeney N, Whitfield N, Campos J; ASM Clinical and Public Health Microbiology Committee and the ASM Corporate Council.

J Clin Microbiol. 2019 Aug 26;57(9). pii: e00495-19. doi: 10.1128/JCM.00495-19. Print 2019 Sep. Review.

23.

Crystal Structure Prediction via Basin-Hopping Global Optimization Employing Tiny Periodic Simulation Cells, with Application to Water-Ice.

Burnham CJ, English NJ.

J Chem Theory Comput. 2019 Jun 11;15(6):3889-3900. doi: 10.1021/acs.jctc.9b00073. Epub 2019 May 14.

PMID:
31084025
24.

Draft Genome Sequence of a bla NDM-1- and bla PME-1-Harboring Pseudomonas aeruginosa Clinical Isolate from Pakistan.

Irum S, Potter RF, Kamran R, Mustafa Z, Wallace MA, Burnham CA, Dantas G, Andleeb S.

Microbiol Resour Announc. 2019 Apr 25;8(17). pii: e00107-19. doi: 10.1128/MRA.00107-19.

25.

Comparative Evaluation of Enteric Bacterial Culture and a Molecular Multiplex Syndromic Panel in Children with Acute Gastroenteritis.

Kellner T, Parsons B, Chui L, Berenger BM, Xie J, Burnham CA, Tarr PI, Lee BE, Nettel-Aguirre A, Szelewicki J, Vanderkooi OG, Pang XL, Zelyas N, Freedman SB.

J Clin Microbiol. 2019 May 24;57(6). pii: e00205-19. doi: 10.1128/JCM.00205-19. Print 2019 Jun.

PMID:
30971465
26.

Culture of Rectal Swab Specimens for Enteric Bacterial Pathogens Decreases Time to Test Result While Preserving Assay Sensitivity Compared to Bulk Fecal Specimens.

Jean S, Yarbrough ML, Anderson NW, Burnham CA.

J Clin Microbiol. 2019 May 24;57(6). pii: e02077-18. doi: 10.1128/JCM.02077-18. Print 2019 Jun.

PMID:
30944186
27.

Human ehrlichiosis at a tertiary-care academic medical center: Clinical associations and outcomes of transplant patients and patients with hemophagocytic lymphohistiocytosis.

Otrock ZK, Eby CS, Burnham CD.

Blood Cells Mol Dis. 2019 Jul;77:17-22. doi: 10.1016/j.bcmd.2019.03.002. Epub 2019 Mar 19.

PMID:
30913447
28.
29.

Effect of changing urine testing orderables and clinician order sets on inpatient urine culture testing: Analysis from a large academic medical center.

Munigala S, Rojek R, Wood H, Yarbrough ML, Jackups RR, Burnham CD, Warren DK.

Infect Control Hosp Epidemiol. 2019 Mar;40(3):281-286. doi: 10.1017/ice.2018.356. Epub 2019 Feb 21.

30.

Controlling ionic conductivity through transprotein electropores in human aquaporin 4: a non-equilibrium molecular-dynamics study.

Bernardi M, Marracino P, Liberti M, Gárate JA, Burnham CJ, Apollonio F, English NJ.

Phys Chem Chem Phys. 2019 Feb 6;21(6):3339-3346. doi: 10.1039/c8cp06643d.

PMID:
30688325
31.

Challenges in assessing the efficacy of systemic corticosteroids for severe wheezing episodes in preschool children.

Guilbert TW, Bacharier LB, Mauger DT, Phipatanakul W, Szefler SJ, Boehmer S, Beigelman A, Fitzpatrick AM, Jackson DJ, Baxi SN, Benson M, Burnham CD, Cabana MD, Castro M, Chmiel JF, Covar R, Daines M, Gaffin JM, Gentile DA, Holguin F, Israel E, Kelly HW, Lazarus SC, Lemanske RF Jr, Ly N, Meade K, Morgan W, Moy J, Olin JT, Peters SP, Pongracic JA, Raissy HH, Ross K, Sheehan WJ, Sorkness C, Teague WG, Thyne S, Martinez FD; National Heart, Lung, and Blood Institute's AsthmaNet.

J Allergy Clin Immunol. 2019 May;143(5):1934-1937.e4. doi: 10.1016/j.jaci.2018.10.071. Epub 2019 Jan 17. No abstract available.

PMID:
30660645
32.

Improved Performance of a Rapid Immunochromatographic Assay for Detection of PBP2a in Non-Staphylococcus aureus Staphylococcal Species.

Canver MC, Gonzalez MD, Ford BA, Arnold AR, Lawhon SD, Burnham CA, Jenkins SG, Burd EM, Westblade LF.

J Clin Microbiol. 2019 Mar 28;57(4). pii: e01417-18. doi: 10.1128/JCM.01417-18. Print 2019 Apr.

33.

Human aquaporin 4 gating dynamics under axially oriented electric-field impulses: A non-equilibrium molecular-dynamics study.

Bernardi M, Marracino P, Ghaani MR, Liberti M, Del Signore F, Burnham CJ, Gárate JA, Apollonio F, English NJ.

J Chem Phys. 2018 Dec 28;149(24):245102. doi: 10.1063/1.5044665.

PMID:
30599740
34.

Population Structure, Antibiotic Resistance, and Uropathogenicity of Klebsiella variicola.

Potter RF, Lainhart W, Twentyman J, Wallace MA, Wang B, Burnham CA, Rosen DA, Dantas G.

MBio. 2018 Dec 18;9(6). pii: e02481-18. doi: 10.1128/mBio.02481-18.

35.

Transprotein-Electropore Characterization: A Molecular Dynamics Investigation on Human AQP4.

Marracino P, Bernardi M, Liberti M, Del Signore F, Trapani E, Gárate JA, Burnham CJ, Apollonio F, English NJ.

ACS Omega. 2018 Nov 30;3(11):15361-15369. doi: 10.1021/acsomega.8b02230. Epub 2018 Nov 13.

36.

Clinical Microbiology Is Growing Up: The Total Laboratory Automation Revolution.

Bailey AL, Ledeboer N, Burnham CD.

Clin Chem. 2019 May;65(5):634-643. doi: 10.1373/clinchem.2017.274522. Epub 2018 Dec 5. Review.

PMID:
30518664
37.

Interplay of personal, pet, and environmental colonization in households affected by community-associated methicillin-resistant Staphylococcus aureus.

Hogan PG, Mork RL, Boyle MG, Muenks CE, Morelli JJ, Thompson RM, Sullivan ML, Gehlert SJ, Merlo JR, McKenzie MG, Wardenburg JB, Rzhetsky A, Burnham CD, Fritz SA.

J Infect. 2019 Mar;78(3):200-207. doi: 10.1016/j.jinf.2018.11.006. Epub 2018 Nov 29.

PMID:
30503843
38.

Does Local Structure Bias How a Crystal Nucleus Evolves?

Hall KW, Zhang Z, Burnham CJ, Guo GJ, Carpendale S, English NJ, Kusalik PG.

J Phys Chem Lett. 2018 Dec 20;9(24):6991-6998. doi: 10.1021/acs.jpclett.8b03115. Epub 2018 Dec 3.

PMID:
30484659
39.

Impact of Amoxicillin-Clavulanate followed by Autologous Fecal Microbiota Transplantation on Fecal Microbiome Structure and Metabolic Potential.

Bulow C, Langdon A, Hink T, Wallace M, Reske KA, Patel S, Sun X, Seiler S, Jones S, Kwon JH, Burnham CA, Dantas G, Dubberke ER.

mSphere. 2018 Nov 21;3(6). pii: e00588-18. doi: 10.1128/mSphereDirect.00588-18.

40.

Diagnostic Interpretation Guidance for Pediatric Enteric Pathogens: A Modified Delphi Consensus Process.

Stang AS, Trudeau M, Vanderkooi OG, Lee BE, Chui L, Pang XL, Allen V, Burnham CD, Goldfarb DM, MacDonald J, Parsons B, Petrich A, Pollari F, Tarr PI, Tipples G, Zhuo R, Freedman SB.

Can J Infect Dis Med Microbiol. 2018 Sep 27;2018:2589826. doi: 10.1155/2018/2589826. eCollection 2018.

41.

Carriage of the Toxic Shock Syndrome Toxin Gene by Contemporary Community-Associated Staphylococcus aureus Isolates.

Parrish KL, Wylie KM, Reich PJ, Hogan PG, Wylie TN, Kennedy CR, Lainhart W, Hunstad DA, Burnham CD, Fritz SA.

J Pediatric Infect Dis Soc. 2019 Nov 6;8(5):470-473. doi: 10.1093/jpids/piy098.

42.

Impact of total laboratory automation on workflow and specimen processing time for culture of urine specimens.

Yarbrough ML, Lainhart W, McMullen AR, Anderson NW, Burnham CD.

Eur J Clin Microbiol Infect Dis. 2018 Dec;37(12):2405-2411. doi: 10.1007/s10096-018-3391-7. Epub 2018 Sep 29.

PMID:
30269180
43.

Clostridium difficile colonization among patients with clinically significant diarrhea and no identifiable cause of diarrhea.

Dubberke ER, Reske KA, Hink T, Kwon JH, Cass C, Bongu J, Burnham CD, Henderson JP.

Infect Control Hosp Epidemiol. 2018 Nov;39(11):1330-1333. doi: 10.1017/ice.2018.225. Epub 2018 Sep 18.

PMID:
30226126
44.

Influence of Molecular Testing on Influenza Diagnosis.

Yarbrough ML, Burnham CD, Anderson NW, Banerjee R, Ginocchio CC, Hanson KE, Uyeki TM.

Clin Chem. 2018 Nov;64(11):1560-1566. doi: 10.1373/clinchem.2018.289363. Epub 2018 Sep 12. No abstract available.

45.

Comparing the Yield of Staphylococcus aureus Recovery with Static versus Agitated Broth Incubation.

Muenks CE, Hogan PG, Burnham CD, Fritz SA.

J Pathog. 2018 Jul 26;2018:1462671. doi: 10.1155/2018/1462671. eCollection 2018.

46.

Comprehensive modeling reveals proximity, seasonality, and hygiene practices as key determinants of MRSA colonization in exposed households.

Mork RL, Hogan PG, Muenks CE, Boyle MG, Thompson RM, Morelli JJ, Sullivan ML, Gehlert SJ, Ross DG, Yn A, Bubeck Wardenburg J, Rzhetsky A, Burnham CD, Fritz SA.

Pediatr Res. 2018 Nov;84(5):668-676. doi: 10.1038/s41390-018-0113-x. Epub 2018 Jul 19.

47.

Diagnostic Performance of Multiplex Nucleic Acid Testing of Bronchoalveolar Lavage and Bronchial Wash Specimens for Respiratory Viral Pathogens.

Munigala S, Burnham CA, Anderson NW, Liang SY, Lawrence SJ, Warren DK.

J Clin Microbiol. 2018 Sep 25;56(10). pii: e00973-18. doi: 10.1128/JCM.00973-18. Print 2018 Oct.

48.

Mechanism of High-Level Daptomycin Resistance in Corynebacterium striatum.

Goldner NK, Bulow C, Cho K, Wallace M, Hsu FF, Patti GJ, Burnham CA, Schlesinger P, Dantas G.

mSphere. 2018 Aug 8;3(4). pii: e00371-18. doi: 10.1128/mSphereDirect.00371-18.

49.

Superficieibacter electus gen. nov., sp. nov., an Extended-Spectrum β-Lactamase Possessing Member of the Enterobacteriaceae Family, Isolated From Intensive Care Unit Surfaces.

Potter RF, D'Souza AW, Wallace MA, Shupe A, Patel S, Gul D, Kwon JH, Beatty W, Andleeb S, Burnham CD, Dantas G.

Front Microbiol. 2018 Jul 20;9:1629. doi: 10.3389/fmicb.2018.01629. eCollection 2018.

50.

Multicenter Evaluation of the Etest Gradient Diffusion Method for Ceftolozane-Tazobactam Susceptibility Testing of Enterobacteriaceae and Pseudomonas aeruginosa.

Bailey AL, Armstrong T, Dwivedi HP, Denys GA, Hindler J, Campeau S, Traczewski M, Humphries R, Burnham CA.

J Clin Microbiol. 2018 Aug 27;56(9). pii: e00717-18. doi: 10.1128/JCM.00717-18. Print 2018 Sep.

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