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Items: 1 to 50 of 168

1.

Utilizing herbarium specimens to quantify historical mycorrhizal communities.

Heberling JM, Burke DJ.

Appl Plant Sci. 2019 Feb 28;7(4):e01223. doi: 10.1002/aps3.1223. eCollection 2019 Apr.

2.

The effects of increased hay-to-grain ratio on behavior, metabolic health measures, and fecal bacterial communities in four Masai giraffe (Giraffa camelopardalis tippelskirchi) at Cleveland Metroparks Zoo.

Monson ML, Dennis PM, Lukas KE, Krynak KL, Carrino-Kyker SR, Burke DJ, Schook MW.

Zoo Biol. 2018 Sep;37(5):320-331. doi: 10.1002/zoo.21434. Epub 2018 Aug 2.

PMID:
30070393
3.

The Burden of Untreated HCV Infection in Hospitalized Inmates: a Hospital Utilization and Cost Analysis.

Wurcel AG, Burke DJ, Wang JJ, Engle B, Noonan K, Knox TA, Kim AY, Linas BP.

J Urban Health. 2018 Aug;95(4):467-473. doi: 10.1007/s11524-018-0277-z.

4.

Gut microbiome composition is associated with cardiac disease in zoo-housed western lowland gorillas (Gorilla gorilla gorilla).

Krynak KL, Burke DJ, Martin RA, Dennis PM.

FEMS Microbiol Lett. 2017 Aug 15;364(15). doi: 10.1093/femsle/fnx149.

PMID:
28859316
5.

Spatial heterogeneity of plant-soil feedbacks increases per capita reproductive biomass of species at an establishment disadvantage.

Burns JH, Brandt AJ, Murphy JE, Kaczowka AM, Burke DJ.

Oecologia. 2017 Apr;183(4):1077-1086. doi: 10.1007/s00442-017-3828-1. Epub 2017 Feb 3.

PMID:
28160090
6.

Litter chemistry and chemical diversity drive ecosystem processes in forest ponds.

Stoler AB, Burke DJ, Relyea RA.

Ecology. 2016 Jul;97(7):1783-1795. doi: 10.1890/15-1786.1.

PMID:
27859152
7.

APC/C and SCF(cyclin F) Constitute a Reciprocal Feedback Circuit Controlling S-Phase Entry.

Choudhury R, Bonacci T, Arceci A, Lahiri D, Mills CA, Kernan JL, Branigan TB, DeCaprio JA, Burke DJ, Emanuele MJ.

Cell Rep. 2016 Sep 20;16(12):3359-3372. doi: 10.1016/j.celrep.2016.08.058.

8.

Classical Genetics with Saccharomyces cerevisiae.

Amberg DC, Burke DJ.

Cold Spring Harb Protoc. 2016 May 2;2016(5). doi: 10.1101/pdb.top077628.

PMID:
27140921
9.

Peroxiredoxin 6 (Prdx6) supports NADPH oxidase1 (Nox1)-based superoxide generation and cell migration.

Kwon J, Wang A, Burke DJ, Boudreau HE, Lekstrom KJ, Korzeniowska A, Sugamata R, Kim YS, Yi L, Ersoy I, Jaeger S, Palaniappan K, Ambruso DR, Jackson SH, Leto TL.

Free Radic Biol Med. 2016 Jul;96:99-115. doi: 10.1016/j.freeradbiomed.2016.04.009. Epub 2016 Apr 14.

10.

Vitronectin-Based, Biomimetic Encapsulating Hydrogel Scaffolds Support Adipogenesis of Adipose Stem Cells.

Clevenger TN, Hinman CR, Ashley Rubin RK, Smither K, Burke DJ, Hawker CJ, Messina D, Van Epps D, Clegg DO.

Tissue Eng Part A. 2016 Apr;22(7-8):597-609. doi: 10.1089/ten.TEA.2015.0550. Epub 2016 Mar 31.

11.

Mycorrhizal fungal communities respond to experimental elevation of soil pH and P availability in temperate hardwood forests.

Carrino-Kyker SR, Kluber LA, Petersen SM, Coyle KP, Hewins CR, DeForest JL, Smemo KA, Burke DJ.

FEMS Microbiol Ecol. 2016 Mar;92(3). pii: fiw024. doi: 10.1093/femsec/fiw024. Epub 2016 Feb 4.

PMID:
26850158
12.

Trapping and desorption of complex organic molecules in water at 20 K.

Burke DJ, Puletti F, Woods PM, Viti S, Slater B, Brown WA.

J Chem Phys. 2015 Oct 28;143(16):164704. doi: 10.1063/1.4934264.

PMID:
26520540
13.

Iron Oxide and Titanium Dioxide Nanoparticle Effects on Plant Performance and Root Associated Microbes.

Burke DJ, Pietrasiak N, Situ SF, Abenojar EC, Porche M, Kraj P, Lakliang Y, Samia AC.

Int J Mol Sci. 2015 Oct 5;16(10):23630-50. doi: 10.3390/ijms161023630.

14.

Larval Environment Alters Amphibian Immune Defenses Differentially across Life Stages and Populations.

Krynak KL, Burke DJ, Benard MF.

PLoS One. 2015 Jun 24;10(6):e0130383. doi: 10.1371/journal.pone.0130383. eCollection 2015.

15.

Adsorption and Thermal Processing of Glycolaldehyde, Methyl Formate, and Acetic Acid on Graphite at 20 K.

Burke DJ, Puletti F, Woods PM, Viti S, Slater B, Brown WA.

J Phys Chem A. 2015 Jul 2;119(26):6837-49. doi: 10.1021/acs.jpca.5b04010. Epub 2015 Jun 22.

PMID:
26057183
16.

Effects of annual and interannual environmental variability on soil fungi associated with an old-growth, temperate hardwood forest.

Burke DJ.

FEMS Microbiol Ecol. 2015 Jun;91(6). pii: fiv053. doi: 10.1093/femsec/fiv053. Epub 2015 May 15.

PMID:
25979478
17.

Connecting the microtubule attachment status of each kinetochore to cell cycle arrest through the spindle assembly checkpoint.

Stukenberg PT, Burke DJ.

Chromosoma. 2015 Dec;124(4):463-80. doi: 10.1007/s00412-015-0515-z. Epub 2015 Apr 28. Review.

PMID:
25917595
18.

Soil microbial community variation correlates most strongly with plant species identity, followed by soil chemistry, spatial location and plant genus.

Burns JH, Anacker BL, Strauss SY, Burke DJ.

AoB Plants. 2015 Mar 27;7. pii: plv030. doi: 10.1093/aobpla/plv030.

19.

Seasonal variation in mycorrhizal fungi colonizing roots of Allium tricoccum (wild leek) in a mature mixed hardwood forest.

Hewins CR, Carrino-Kyker SR, Burke DJ.

Mycorrhiza. 2015 Aug;25(6):469-83. doi: 10.1007/s00572-015-0628-5. Epub 2015 Jan 30.

PMID:
25634800
20.

Wild-type and mutant p53 differentially regulate NADPH oxidase 4 in TGF-β-mediated migration of human lung and breast epithelial cells.

Boudreau HE, Casterline BW, Burke DJ, Leto TL.

Br J Cancer. 2014 May 13;110(10):2569-82. doi: 10.1038/bjc.2014.165. Epub 2014 Apr 8.

21.

Surface science investigations of the role of CO₂ in astrophysical ices.

Edridge JL, Freimann K, Burke DJ, Brown WA.

Philos Trans A Math Phys Eng Sci. 2013 Jun 3;371(1994):20110578. doi: 10.1098/rsta.2011.0578. Print 2013 Jul 13.

PMID:
23734046
22.

Unbiased segregation of yeast chromatids in Saccharomyces cerevisiae.

Burke DJ.

Chromosome Res. 2013 May;21(3):193-202. doi: 10.1007/s10577-013-9348-x. Review.

PMID:
23681653
23.

Shotgun metagenomic analysis of metabolic diversity and microbial community structure in experimental vernal pools subjected to nitrate pulse.

Carrino-Kyker SR, Smemo KA, Burke DJ.

BMC Microbiol. 2013 Apr 10;13:78. doi: 10.1186/1471-2180-13-78.

24.

Belowground biotic complexity drives aboveground dynamics: a test of the soil community feedback model.

Pendergast TH 4th, Burke DJ, Carson WP.

New Phytol. 2013 Mar;197(4):1300-10. doi: 10.1111/nph.12105. Epub 2013 Jan 11. Erratum in: New Phytol. 2019 May;222(3):1662.

25.

Mycorrhizal response to experimental pH and P manipulation in acidic hardwood forests.

Kluber LA, Carrino-Kyker SR, Coyle KP, DeForest JL, Hewins CR, Shaw AN, Smemo KA, Burke DJ.

PLoS One. 2012;7(11):e48946. doi: 10.1371/journal.pone.0048946. Epub 2012 Nov 8.

26.

Bioretention column study of bacteria community response to salt-enriched artificial stormwater.

Endreny T, Burke DJ, Burchhardt KM, Fabian MW, Kretzer AM.

J Environ Qual. 2012 Nov-Dec;41(6):1951-9. doi: 10.2134/jeq2012.0082.

PMID:
23128752
27.

Sister chromatids segregate at mitosis without mother-daughter bias in Saccharomyces cerevisiae.

Keyes BE, Sykes KD, Remington CE, Burke DJ.

Genetics. 2012 Dec;192(4):1553-7. doi: 10.1534/genetics.112.145680. Epub 2012 Oct 10.

28.

A redundant function for the N-terminal tail of Ndc80 in kinetochore-microtubule interaction in Saccharomyces cerevisiae.

Demirel PB, Keyes BE, Chaterjee M, Remington CE, Burke DJ.

Genetics. 2012 Oct;192(2):753-6. doi: 10.1534/genetics.112.143818. Epub 2012 Jul 30.

29.

The effects of pH change and NO3- pulse on microbial community structure and function: a vernal pool microcosm study.

Carrino-Kyker SR, Smemo KA, Burke DJ.

FEMS Microbiol Ecol. 2012 Sep;81(3):660-72. doi: 10.1111/j.1574-6941.2012.01397.x. Epub 2012 May 14.

30.

A conserved role for COMA/CENP-H/I/N kinetochore proteins in the spindle checkpoint.

Matson DR, Demirel PB, Stukenberg PT, Burke DJ.

Genes Dev. 2012 Mar 15;26(6):542-7. doi: 10.1101/gad.184184.111.

31.

Novel interactions between actin and the proteasome revealed by complex haploinsufficiency.

Haarer B, Aggeli D, Viggiano S, Burke DJ, Amberg DC.

PLoS Genet. 2011 Sep;7(9):e1002288. doi: 10.1371/journal.pgen.1002288. Epub 2011 Sep 22.

32.

Use of yeast chemigenomics and COXEN informatics in preclinical evaluation of anticancer agents.

Smith SC, Havaleshko DM, Moon K, Baras AS, Lee J, Bekiranov S, Burke DJ, Theodorescu D.

Neoplasia. 2011 Jan;13(1):72-80.

33.

Ice in space: surface science investigations of the thermal desorption of model interstellar ices on dust grain analogue surfaces.

Burke DJ, Brown WA.

Phys Chem Chem Phys. 2010 Jun 21;12(23):5947-69. doi: 10.1039/b917005g. Epub 2010 Feb 23.

PMID:
20520900
34.
35.

Applications of orthogonal "click" chemistries in the synthesis of functional soft materials.

Iha RK, Wooley KL, Nyström AM, Burke DJ, Kade MJ, Hawker CJ.

Chem Rev. 2009 Nov;109(11):5620-86. doi: 10.1021/cr900138t. Review. No abstract available.

36.

Vegetation and soil environment influence the spatial distribution of root-associated fungi in a mature beech-maple forest.

Burke DJ, López-Gutiérrez JC, Smemo KA, Chan CR.

Appl Environ Microbiol. 2009 Dec;75(24):7639-48. doi: 10.1128/AEM.01648-09. Epub 2009 Oct 23.

37.

Interpreting spatial information and regulating mitosis in response to spindle orientation.

Burke DJ.

Genes Dev. 2009 Jul 15;23(14):1613-8. doi: 10.1101/gad.1826409.

38.

Irc15 Is a microtubule-associated protein that regulates microtubule dynamics in Saccharomyces cerevisiae.

Keyes BE, Burke DJ.

Curr Biol. 2009 Mar 24;19(6):472-8. doi: 10.1016/j.cub.2009.01.068. Epub 2009 Mar 12.

40.

Thermally induced mixing of water dominated interstellar ices.

Burke DJ, Wolff AJ, Edridge JL, Brown WA.

Phys Chem Chem Phys. 2008 Aug 28;10(32):4956-67. doi: 10.1039/b807220e. Epub 2008 Jul 23.

PMID:
18688540
41.

Molecular analysis of bacterial communities associated with the roots of Douglas fir (Pseudotsuga menziesii) colonized by different ectomycorrhizal fungi.

Burke DJ, Dunham SM, Kretzer AM.

FEMS Microbiol Ecol. 2008 Aug;65(2):299-309. doi: 10.1111/j.1574-6941.2008.00491.x. Epub 2008 May 1.

42.

DNA damage activates the SAC in an ATM/ATR-dependent manner, independently of the kinetochore.

Kim EM, Burke DJ.

PLoS Genet. 2008 Feb 29;4(2):e1000015. doi: 10.1371/journal.pgen.1000015.

43.

Linking kinetochore-microtubule binding to the spindle checkpoint.

Burke DJ, Stukenberg PT.

Dev Cell. 2008 Apr;14(4):474-9. doi: 10.1016/j.devcel.2008.03.015. Review.

44.

The immortal strand hypothesis: how could it work?

Lew DJ, Burke DJ, Dutta A.

Cell. 2008 Apr 4;133(1):21-3. doi: 10.1016/j.cell.2008.03.016. No abstract available.

45.

The adsorption and desorption of ethanol ices from a model grain surface.

Burke DJ, Wolff AJ, Edridge JL, Brown WA.

J Chem Phys. 2008 Mar 14;128(10):104702. doi: 10.1063/1.2888556.

PMID:
18345914
46.

Differential regulation of anaphase promoting complex/cyclosome substrates by the spindle assembly checkpoint in Saccharomyces cerevisiae.

Keyes BE, Yellman CM, Burke DJ.

Genetics. 2008 Jan;178(1):589-91. doi: 10.1534/genetics.107.083642.

47.

Analysis of nitrogen-fixing members of the epsilon subclass of Proteobacteria in salt marsh sediments.

Welsh A, Burke DJ, Hahn D.

Appl Environ Microbiol. 2007 Dec;73(23):7747-52. Epub 2007 Oct 5.

48.

Golgi manganese transport is required for rapamycin signaling in Saccharomyces cerevisiae.

Devasahayam G, Burke DJ, Sturgill TW.

Genetics. 2007 Sep;177(1):231-8. Epub 2007 Jul 1.

49.

Fate and effects of heavy metals in salt marsh sediments.

Suntornvongsagul K, Burke DJ, Hamerlynck EP, Hahn D.

Environ Pollut. 2007 Sep;149(1):79-91. Epub 2007 Feb 7.

PMID:
17291650
50.

Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry.

Chi A, Huttenhower C, Geer LY, Coon JJ, Syka JE, Bai DL, Shabanowitz J, Burke DJ, Troyanskaya OG, Hunt DF.

Proc Natl Acad Sci U S A. 2007 Feb 13;104(7):2193-8. Epub 2007 Feb 7.

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