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Items: 1 to 50 of 59

1.

The Biogeography of Deep Time Phylogenetic Reticulation.

Burbrink FT, Gehara M.

Syst Biol. 2018 Sep 1;67(5):743-744. doi: 10.1093/sysbio/syy019.

PMID:
29534232
2.

Host susceptibility to snake fungal disease is highly dispersed across phylogenetic and functional trait space.

Burbrink FT, Lorch JM, Lips KR.

Sci Adv. 2017 Dec 20;3(12):e1701387. doi: 10.1126/sciadv.1701387. eCollection 2017 Dec.

3.

Climatic suitability, isolation by distance and river resistance explain genetic variation in a Brazilian whiptail lizard.

Oliveira EF, Martinez PA, São-Pedro VA, Gehara M, Burbrink FT, Mesquita DO, Garda AA, Colli GR, Costa GC.

Heredity (Edinb). 2018 Mar;120(3):251-265. doi: 10.1038/s41437-017-0017-2. Epub 2017 Dec 14.

PMID:
29238076
4.

Estimating synchronous demographic changes across populations using hABC and its application for a herpetological community from northeastern Brazil.

Gehara M, Garda AA, Werneck FP, Oliveira EF, da Fonseca EM, Camurugi F, Magalhães FM, Lanna FM, Sites JW Jr, Marques R, Silveira-Filho R, São Pedro VA, Colli GR, Costa GC, Burbrink FT.

Mol Ecol. 2017 Sep;26(18):4756-4771. doi: 10.1111/mec.14239. Epub 2017 Aug 24.

PMID:
28734050
5.

Using phylogenomics to understand the link between biogeographic origins and regional diversification in ratsnakes.

Chen X, Lemmon AR, Lemmon EM, Pyron RA, Burbrink FT.

Mol Phylogenet Evol. 2017 Jun;111:206-218. doi: 10.1016/j.ympev.2017.03.017. Epub 2017 Mar 24.

PMID:
28347887
6.

Asynchronous demographic responses to Pleistocene climate change in Eastern Nearctic vertebrates.

Burbrink FT, Chan YL, Myers EA, Ruane S, Smith BT, Hickerson MJ.

Ecol Lett. 2016 Dec;19(12):1457-1467. doi: 10.1111/ele.12695. Epub 2016 Oct 25.

PMID:
27781365
7.

Ecological divergence in the yellow-bellied kingsnake (Lampropeltis calligaster) at two North American biodiversity hotspots.

McKelvy AD, Burbrink FT.

Mol Phylogenet Evol. 2017 Jan;106:61-72. doi: 10.1016/j.ympev.2016.09.006. Epub 2016 Sep 13.

PMID:
27637990
8.

Complex longitudinal diversification across South China and Vietnam in Stejneger's pit viper, Viridovipera stejnegeri (Schmidt, 1925) (Reptilia: Serpentes: Viperidae).

Guo P, Liu Q, Zhu F, Zhong GH, Chen X, Myers EA, Che J, Zhang L, Ziegler T, Nguyen TQ, Burbrink FT.

Mol Ecol. 2016 Jun;25(12):2920-36. doi: 10.1111/mec.13658. Epub 2016 May 21.

PMID:
27094901
9.

Predicting community structure in snakes on Eastern Nearctic islands using ecological neutral theory and phylogenetic methods.

Burbrink FT, McKelvy AD, Pyron RA, Myers EA.

Proc Biol Sci. 2015 Nov 22;282(1819). pii: 20151700. doi: 10.1098/rspb.2015.1700.

10.

Speciation with gene flow in whiptail lizards from a Neotropical xeric biome.

Oliveira EF, Gehara M, São-Pedro VA, Chen X, Myers EA, Burbrink FT, Mesquita DO, Garda AA, Colli GR, Rodrigues MT, Arias FJ, Zaher H, Santos RM, Costa GC.

Mol Ecol. 2015 Dec;24(23):5957-75. doi: 10.1111/mec.13433. Epub 2015 Nov 25.

PMID:
26502084
11.

Comparing species tree estimation with large anchored phylogenomic and small Sanger-sequenced molecular datasets: an empirical study on Malagasy pseudoxyrhophiine snakes.

Ruane S, Raxworthy CJ, Lemmon AR, Lemmon EM, Burbrink FT.

BMC Evol Biol. 2015 Oct 12;15:221. doi: 10.1186/s12862-015-0503-1.

12.

Independent Demographic Responses to Climate Change among Temperate and Tropical Milksnakes (Colubridae: Genus Lampropeltis).

Ruane S, Torres-Carvajal O, Burbrink FT.

PLoS One. 2015 Jun 17;10(6):e0128543. doi: 10.1371/journal.pone.0128543. eCollection 2015.

13.

Contrasting models of parity-mode evolution in squamate reptiles.

Pyron RA, Burbrink FT.

J Exp Zool B Mol Dev Evol. 2015 Sep;324(6):467-72. doi: 10.1002/jez.b.22593. Epub 2015 Feb 24.

PMID:
25712034
14.

The phylogenetic position and taxonomic status of the Rainbow Tree Snake Gonyophis margaritatus (Peters, 1871) (Squamata: Colubridae) .

Chen X, McKelvy AD, Grismer LL, Matsui M, Nishikawa K, Burbrink FT.

Zootaxa. 2014 Nov 10;3881(6):532-48. doi: 10.11646/zootaxa.3881.6.3.

PMID:
25543651
15.

Phylogenetic niche conservatism and the evolutionary basis of ecological speciation.

Pyron RA, Costa GC, Patten MA, Burbrink FT.

Biol Rev Camb Philos Soc. 2015 Nov;90(4):1248-62. doi: 10.1111/brv.12154. Epub 2014 Nov 26.

PMID:
25428167
16.

Effectiveness of phylogenomic data and coalescent species-tree methods for resolving difficult nodes in the phylogeny of advanced snakes (Serpentes: Caenophidia).

Pyron RA, Hendry CR, Chou VM, Lemmon EM, Lemmon AR, Burbrink FT.

Mol Phylogenet Evol. 2014 Dec;81:221-31. doi: 10.1016/j.ympev.2014.08.023. Epub 2014 Sep 3.

PMID:
25193610
17.

A taxonomic revision of boas (Serpentes: Boidae).

Pyron RA, Reynolds RG, Burbrink FT.

Zootaxa. 2014 Aug 1;3846(2):249-60. doi: 10.11646/zootaxa.3846.2.5. No abstract available.

PMID:
25112250
18.

A hybrid phylogenetic-phylogenomic approach for species tree estimation in African Agama lizards with applications to biogeography, character evolution, and diversification.

Leaché AD, Wagner P, Linkem CW, Böhme W, Papenfuss TJ, Chong RA, Lavin BR, Bauer AM, Nielsen SV, Greenbaum E, Rödel MO, Schmitz A, LeBreton M, Ineich I, Chirio L, Ofori-Boateng C, Eniang EA, Baha El Din S, Lemmon AR, Burbrink FT.

Mol Phylogenet Evol. 2014 Oct;79:215-30. doi: 10.1016/j.ympev.2014.06.013. Epub 2014 Jun 25.

PMID:
24973715
19.

Coalescent species delimitation in milksnakes (genus Lampropeltis) and impacts on phylogenetic comparative analyses.

Ruane S, Bryson RW Jr, Pyron RA, Burbrink FT.

Syst Biol. 2014 Mar;63(2):231-50. doi: 10.1093/sysbio/syt099. Epub 2013 Dec 10.

PMID:
24335429
20.

Phylogenetic estimates of speciation and extinction rates for testing ecological and evolutionary hypotheses.

Pyron RA, Burbrink FT.

Trends Ecol Evol. 2013 Dec;28(12):729-36. doi: 10.1016/j.tree.2013.09.007. Epub 2013 Oct 10. Review.

PMID:
24120478
21.

Multilocus phylogeographic assessment of the California Mountain Kingsnake (Lampropeltis zonata) suggests alternative patterns of diversification for the California Floristic Province.

Myers EA, Rodríguez-Robles JA, Denardo DF, Staub RE, Stropoli A, Ruane S, Burbrink FT.

Mol Ecol. 2013 Nov;22(21):5418-29. doi: 10.1111/mec.12478. Epub 2013 Sep 19.

PMID:
24103054
22.

Assessing species boundaries and the phylogenetic position of the rare Szechwan ratsnake, Euprepiophis perlaceus (Serpentes: Colubridae), using coalescent-based methods.

Chen X, Jiang K, Guo P, Huang S, Rao D, Ding L, Takeuchi H, Che J, Zhang YP, Myers EA, Burbrink FT.

Mol Phylogenet Evol. 2014 Jan;70:130-6. doi: 10.1016/j.ympev.2013.09.003. Epub 2013 Sep 21.

PMID:
24060366
23.

Early origin of viviparity and multiple reversions to oviparity in squamate reptiles.

Pyron RA, Burbrink FT.

Ecol Lett. 2014 Jan;17(1):13-21. doi: 10.1111/ele.12168. Epub 2013 Aug 19.

PMID:
23953272
24.

Phylogeny and tempo of diversification in the superradiation of spiny-rayed fishes.

Near TJ, Dornburg A, Eytan RI, Keck BP, Smith WL, Kuhn KL, Moore JA, Price SA, Burbrink FT, Friedman M, Wainwright PC.

Proc Natl Acad Sci U S A. 2013 Jul 30;110(31):12738-43. doi: 10.1073/pnas.1304661110. Epub 2013 Jul 15.

25.

A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes.

Pyron RA, Burbrink FT, Wiens JJ.

BMC Evol Biol. 2013 Apr 29;13:93. doi: 10.1186/1471-2148-13-93.

26.

Lycodon and Dinodon: one genus or two? Evidence from molecular phylogenetics and morphological comparisons.

Guo P, Zhang L, Liu Q, Li C, Pyron RA, Jiang K, Burbrink FT.

Mol Phylogenet Evol. 2013 Jul;68(1):144-9. doi: 10.1016/j.ympev.2013.03.008. Epub 2013 Mar 22.

PMID:
23523863
27.

Molecular systematics and historical biogeography of tree boas (Corallus spp.).

Colston TJ, Grazziotin FG, Shepard DB, Vitt LJ, Colli GR, Henderson RW, Blair Hedges S, Bonatto S, Zaher H, Noonan BP, Burbrink FT.

Mol Phylogenet Evol. 2013 Mar;66(3):953-9. doi: 10.1016/j.ympev.2012.11.027. Epub 2012 Dec 20.

PMID:
23261714
28.

Genus-level phylogeny of snakes reveals the origins of species richness in Sri Lanka.

Pyron RA, Kandambi HK, Hendry CR, Pushpamal V, Burbrink FT, Somaweera R.

Mol Phylogenet Evol. 2013 Mar;66(3):969-78. doi: 10.1016/j.ympev.2012.12.004. Epub 2012 Dec 20.

PMID:
23261713
29.

Understanding the formation of ancient intertropical disjunct distributions using Asian and Neotropical hinged-teeth snakes (Sibynophis and Scaphiodontophis: Serpentes: Colubridae).

Chen X, Huang S, Guo P, Colli GR, Nieto Montes de Oca A, Vitt LJ, Pyron RA, Burbrink FT.

Mol Phylogenet Evol. 2013 Jan;66(1):254-61. doi: 10.1016/j.ympev.2012.09.032. Epub 2012 Oct 5.

PMID:
23044403
30.

Evidence for determinism in species diversification and contingency in phenotypic evolution during adaptive radiation.

Burbrink FT, Chen X, Myers EA, Brandley MC, Pyron RA.

Proc Biol Sci. 2012 Dec 7;279(1748):4817-26. doi: 10.1098/rspb.2012.1669. Epub 2012 Oct 3.

31.

Coalescent-based species delimitation in an integrative taxonomy.

Fujita MK, Leaché AD, Burbrink FT, McGuire JA, Moritz C.

Trends Ecol Evol. 2012 Sep;27(9):480-8. doi: 10.1016/j.tree.2012.04.012. Epub 2012 May 25.

PMID:
22633974
32.

Out of Asia: natricine snakes support the Cenozoic Beringian Dispersal Hypothesis.

Guo P, Liu Q, Xu Y, Jiang K, Hou M, Ding L, Pyron RA, Burbrink FT.

Mol Phylogenet Evol. 2012 Jun;63(3):825-33. doi: 10.1016/j.ympev.2012.02.021. Epub 2012 Mar 12.

PMID:
22430561
33.

Trait-dependent diversification and the impact of palaeontological data on evolutionary hypothesis testing in New World ratsnakes (tribe Lampropeltini).

Pyron RA, Burbrink FT.

J Evol Biol. 2012 Mar;25(3):497-508. doi: 10.1111/j.1420-9101.2011.02440.x. Epub 2012 Jan 6.

34.

Extinction, ecological opportunity, and the origins of global snake diversity.

Pyron RA, Burbrink FT.

Evolution. 2012 Jan;66(1):163-78. doi: 10.1111/j.1558-5646.2011.01437.x. Epub 2011 Sep 2.

PMID:
22220872
35.

The impact of gene-tree/species-tree discordance on diversification-rate estimation.

Burbrink FT, Pyron RA.

Evolution. 2011 Jul;65(7):1851-61. doi: 10.1111/j.1558-5646.2011.01260.x. Epub 2011 Mar 19. Erratum in: Evolution. 2012 Mar;66(3):942-943. Evolution. 2012 Mar;66(3):943.

PMID:
21729043
36.

Speciation at the Mogollon Rim in the Arizona Mountain Kingsnake (Lampropeltis pyromelana).

Burbrink FT, Yao H, Ingrasci M, Bryson RW Jr, Guiher TJ, Ruane S.

Mol Phylogenet Evol. 2011 Sep;60(3):445-54. doi: 10.1016/j.ympev.2011.05.009. Epub 2011 May 27.

PMID:
21627995
37.

Local-scale environmental variation generates highly divergent lineages associated with stream drainages in a terrestrial salamander, Plethodon caddoensis.

Shepard DB, Burbrink FT.

Mol Phylogenet Evol. 2011 May;59(2):399-411. doi: 10.1016/j.ympev.2011.03.007. Epub 2011 Mar 22.

PMID:
21414415
38.

Historical versus contemporary migration in fragmented populations.

Burbrink FT.

Mol Ecol. 2010 Dec;19(24):5321-3. doi: 10.1111/j.1365-294X.2010.04861.x.

PMID:
21134008
39.

The phylogeny of advanced snakes (Colubroidea), with discovery of a new subfamily and comparison of support methods for likelihood trees.

Pyron RA, Burbrink FT, Colli GR, de Oca AN, Vitt LJ, Kuczynski CA, Wiens JJ.

Mol Phylogenet Evol. 2011 Feb;58(2):329-42. doi: 10.1016/j.ympev.2010.11.006. Epub 2010 Nov 11.

PMID:
21074626
40.

Phylogenetic relationships of the Cretaceous frog Beelzebufo from Madagascar and the placement of fossil constraints based on temporal and phylogenetic evidence.

Ruane S, Pyron RA, Burbrink FT.

J Evol Biol. 2011 Feb;24(2):274-85. doi: 10.1111/j.1420-9101.2010.02164.x. Epub 2010 Nov 2.

41.

Does dispersal across an aquatic geographic barrier obscure phylogeographic structure in the diamond-backed watersnake (Nerodia rhombifer)?

Brandley MC, Guiher TJ, Pyron RA, Winne CT, Burbrink FT.

Mol Phylogenet Evol. 2010 Nov;57(2):552-60. doi: 10.1016/j.ympev.2010.07.015. Epub 2010 Aug 3.

PMID:
20688180
42.

How does ecological opportunity influence rates of speciation, extinction, and morphological diversification in New World ratsnakes (tribe Lampropeltini)?

Burbrink FT, Pyron RA.

Evolution. 2010 Apr 1;64(4):934-43. doi: 10.1111/j.1558-5646.2009.00888.x. Epub 2009 Nov 6.

PMID:
19895554
43.

Body size as a primary determinant of ecomorphological diversification and the evolution of mimicry in the lampropeltinine snakes (Serpentes: Colubridae).

Pyron RA, Burbrink FT.

J Evol Biol. 2009 Oct;22(10):2057-67. doi: 10.1111/j.1420-9101.2009.01820.x. Epub 2009 Aug 20.

44.

Lineage diversification in a widespread species: roles for niche divergence and conservatism in the common kingsnake, Lampropeltis getula.

Alexander Pyron R, Burbrink FT.

Mol Ecol. 2009 Aug;18(16):3443-57. doi: 10.1111/j.1365-294X.2009.04292.x. Epub 2009 Jul 31.

PMID:
19659478
45.

Phylogeographic and demographic effects of Pleistocene climatic fluctuations in a montane salamander, Plethodon fourchensis.

Shepard DB, Burbrink FT.

Mol Ecol. 2009 May;18(10):2243-62. doi: 10.1111/j.1365-294X.2009.04164.x. Epub 2009 Apr 14.

PMID:
19389165
46.

Neogene diversification and taxonomic stability in the snake tribe Lampropeltini (Serpentes: Colubridae).

Pyron RA, Burbrink FT.

Mol Phylogenet Evol. 2009 Aug;52(2):524-9. doi: 10.1016/j.ympev.2009.02.008. Epub 2009 Feb 21. No abstract available.

PMID:
19236930
47.

Lineage diversification and historical demography of a sky island salamander, Plethodon ouachitae, from the Interior Highlands.

Shepard DB, Burbrink FT.

Mol Ecol. 2008 Dec;17(24):5315-35. doi: 10.1111/j.1365-294X.2008.03998.x.

PMID:
19121000
48.

Claims of potential expansion throughout the U.S. by invasive python species are contradicted by ecological niche models.

Pyron RA, Burbrink FT, Guiher TJ.

PLoS One. 2008 Aug 13;3(8):e2931. doi: 10.1371/journal.pone.0002931.

49.

Demographic and phylogeographic histories of two venomous North American snakes of the genus Agkistrodon.

Guiher TJ, Burbrink FT.

Mol Phylogenet Evol. 2008 Aug;48(2):543-53. doi: 10.1016/j.ympev.2008.04.008. Epub 2008 Apr 14.

PMID:
18539486
50.

The taming of the skew: estimating proper confidence intervals for divergence dates.

Burbrink FT, Pyron RA.

Syst Biol. 2008 Apr;57(2):317-28. doi: 10.1080/10635150802040605. No abstract available.

PMID:
18432552

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