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Items: 1 to 50 of 132

1.

A role for Mog1 in H2Bub1 and H3K4me3 regulation affecting RNAPII transcription and mRNA export.

Oliete-Calvo P, Serrano-Quílez J, Nuño-Cabanes C, Pérez-Martínez ME, Soares LM, Dichtl B, Buratowski S, Pérez-Ortín JE, Rodríguez-Navarro S.

EMBO Rep. 2018 Sep 24. pii: e45992. doi: 10.15252/embr.201845992. [Epub ahead of print]

PMID:
30249596
2.

Rpd3L HDAC links H3K4me3 to transcriptional repression memory.

Lee BB, Choi A, Kim JH, Jun Y, Woo H, Ha SD, Yoon CY, Hwang JT, Steinmetz L, Buratowski S, Lee S, Kim HY, Kim T.

Nucleic Acids Res. 2018 Sep 19;46(16):8261-8274. doi: 10.1093/nar/gky573.

3.

Cell-Cycle Modulation of Transcription Termination Factor Sen1.

Mischo HE, Chun Y, Harlen KM, Smalec BM, Dhir S, Churchman LS, Buratowski S.

Mol Cell. 2018 Apr 19;70(2):312-326.e7. doi: 10.1016/j.molcel.2018.03.010. Epub 2018 Apr 12.

4.

Efficient termination of nuclear lncRNA transcription promotes mitochondrial genome maintenance.

du Mee DJM, Ivanov M, Parker JP, Buratowski S, Marquardt S.

Elife. 2018 Mar 5;7. pii: e31989. doi: 10.7554/eLife.31989.

5.

Downstream promoter interactions of TFIID TAFs facilitate transcription reinitiation.

Joo YJ, Ficarro SB, Soares LM, Chun Y, Marto JA, Buratowski S.

Genes Dev. 2017 Nov 1;31(21):2162-2174. doi: 10.1101/gad.306324.117. Epub 2017 Dec 4.

6.

Erratum: Modulation of mRNA and lncRNA expression dynamics by the Set2-Rpd3S pathway.

Kim JH, Lee BB, Oh YM, Zhu C, Steinmetz LM, Lee Y, Kim WK, Lee SB, Buratowski S, Kim T.

Nat Commun. 2017 Nov 29;8:16122. doi: 10.1038/ncomms16122.

7.

Determinants of Histone H3K4 Methylation Patterns.

Soares LM, He PC, Chun Y, Suh H, Kim T, Buratowski S.

Mol Cell. 2017 Nov 16;68(4):773-785.e6. doi: 10.1016/j.molcel.2017.10.013. Epub 2017 Nov 9.

PMID:
29129639
8.

Microprocessor Recruitment to Elongating RNA Polymerase II Is Required for Differential Expression of MicroRNAs.

Church VA, Pressman S, Isaji M, Truscott M, Cizmecioglu NT, Buratowski S, Frolov MV, Carthew RW.

Cell Rep. 2017 Sep 26;20(13):3123-3134. doi: 10.1016/j.celrep.2017.09.010.

9.

Modulation of gene expression dynamics by co-transcriptional histone methylations.

Woo H, Dam Ha S, Lee SB, Buratowski S, Kim T.

Exp Mol Med. 2017 Apr 28;49(4):e326. doi: 10.1038/emm.2017.19. Review.

10.

Modulation of mRNA and lncRNA expression dynamics by the Set2-Rpd3S pathway.

Kim JH, Lee BB, Oh YM, Zhu C, Steinmetz LM, Lee Y, Kim WK, Lee SB, Buratowski S, Kim T.

Nat Commun. 2016 Nov 28;7:13534. doi: 10.1038/ncomms13534. Erratum in: Nat Commun. 2017 Nov 29;8:16122.

11.

Structural biology: Snapshots of transcription initiation.

Hahn S, Buratowski S.

Nature. 2016 May 19;533(7603):331-2. doi: 10.1038/nature18437. Epub 2016 May 11. No abstract available.

12.

Direct Analysis of Phosphorylation Sites on the Rpb1 C-Terminal Domain of RNA Polymerase II.

Suh H, Ficarro SB, Kang UB, Chun Y, Marto JA, Buratowski S.

Mol Cell. 2016 Jan 21;61(2):297-304. doi: 10.1016/j.molcel.2015.12.021.

13.

A Chromatin-Based Mechanism for Limiting Divergent Noncoding Transcription.

Marquardt S, Escalante-Chong R, Pho N, Wang J, Churchman LS, Springer M, Buratowski S.

Cell. 2014 Jul 17;158(2):462. doi: 10.1016/j.cell.2014.06.038. Epub 2014 Jul 17. No abstract available.

14.

A chromatin-based mechanism for limiting divergent noncoding transcription.

Marquardt S, Escalante-Chong R, Pho N, Wang J, Churchman LS, Springer M, Buratowski S.

Cell. 2014 Jun 19;157(7):1712-23. doi: 10.1016/j.cell.2014.04.036.

15.

Feedback control of Set1 protein levels is important for proper H3K4 methylation patterns.

Soares LM, Radman-Livaja M, Lin SG, Rando OJ, Buratowski S.

Cell Rep. 2014 Mar 27;6(6):961-972. doi: 10.1016/j.celrep.2014.02.017. Epub 2014 Mar 6.

16.

The RNA polymerase II C-terminal domain-interacting domain of yeast Nrd1 contributes to the choice of termination pathway and couples to RNA processing by the nuclear exosome.

Heo DH, Yoo I, Kong J, Lidschreiber M, Mayer A, Choi BY, Hahn Y, Cramer P, Buratowski S, Kim M.

J Biol Chem. 2013 Dec 20;288(51):36676-90. doi: 10.1074/jbc.M113.508267. Epub 2013 Nov 6.

17.

The C-terminal domain of Rpb1 functions on other RNA polymerase II subunits.

Suh H, Hazelbaker DZ, Soares LM, Buratowski S.

Mol Cell. 2013 Sep 26;51(6):850-8. doi: 10.1016/j.molcel.2013.08.015. Epub 2013 Sep 12.

18.

Histone Crosstalk: H2Bub and H3K4 Methylation.

Soares LM, Buratowski S.

Mol Cell. 2013 Mar 28;49(6):1019-20. doi: 10.1016/j.molcel.2013.03.012.

19.

Regulation of primary response genes in B cells.

Fowler T, Suh H, Buratowski S, Roy AL.

J Biol Chem. 2013 May 24;288(21):14906-16. doi: 10.1074/jbc.M113.454355. Epub 2013 Mar 27.

20.

Kinetic competition between RNA Polymerase II and Sen1-dependent transcription termination.

Hazelbaker DZ, Marquardt S, Wlotzka W, Buratowski S.

Mol Cell. 2013 Jan 10;49(1):55-66. doi: 10.1016/j.molcel.2012.10.014. Epub 2012 Nov 21.

21.

Transcription: base J blocks the way.

Hazelbaker DZ, Buratowski S.

Curr Biol. 2012 Nov 20;22(22):R960-2. doi: 10.1016/j.cub.2012.10.010.

22.

Set3 HDAC mediates effects of overlapping noncoding transcription on gene induction kinetics.

Kim T, Xu Z, Clauder-Münster S, Steinmetz LM, Buratowski S.

Cell. 2012 Sep 14;150(6):1158-69. doi: 10.1016/j.cell.2012.08.016. Epub 2012 Sep 6.

23.

Transcription of two long noncoding RNAs mediates mating-type control of gametogenesis in budding yeast.

van Werven FJ, Neuert G, Hendrick N, Lardenois A, Buratowski S, van Oudenaarden A, Primig M, Amon A.

Cell. 2012 Sep 14;150(6):1170-81. doi: 10.1016/j.cell.2012.06.049. Epub 2012 Sep 6.

24.

Systematic dissection of roles for chromatin regulators in a yeast stress response.

Weiner A, Chen HV, Liu CL, Rahat A, Klien A, Soares L, Gudipati M, Pfeffner J, Regev A, Buratowski S, Pleiss JA, Friedman N, Rando OJ.

PLoS Biol. 2012;10(7):e1001369. doi: 10.1371/journal.pbio.1001369. Epub 2012 Jul 31.

25.

Proteomic analysis demonstrates activator- and chromatin-specific recruitment to promoters.

Sikorski TW, Joo YJ, Ficarro SB, Askenazi M, Buratowski S, Marto JA.

J Biol Chem. 2012 Oct 12;287(42):35397-408. doi: 10.1074/jbc.M112.391581. Epub 2012 Aug 17.

26.

A key role for Chd1 in histone H3 dynamics at the 3' ends of long genes in yeast.

Radman-Livaja M, Quan TK, Valenzuela L, Armstrong JA, van Welsem T, Kim T, Lee LJ, Buratowski S, van Leeuwen F, Rando OJ, Hartzog GA.

PLoS Genet. 2012;8(7):e1002811. doi: 10.1371/journal.pgen.1002811. Epub 2012 Jul 12.

27.

Yeast Swd2 is essential because of antagonism between Set1 histone methyltransferase complex and APT (associated with Pta1) termination factor.

Soares LM, Buratowski S.

J Biol Chem. 2012 May 4;287(19):15219-31. doi: 10.1074/jbc.M112.341412. Epub 2012 Mar 19.

28.

Gene expression: transcription initiation unwrapped.

Buratowski S.

Nature. 2012 Mar 14;483(7389):286-7. doi: 10.1038/483286a. No abstract available.

29.

Sub1 and RPA associate with RNA polymerase II at different stages of transcription.

Sikorski TW, Ficarro SB, Holik J, Kim T, Rando OJ, Marto JA, Buratowski S.

Mol Cell. 2011 Nov 4;44(3):397-409. doi: 10.1016/j.molcel.2011.09.013.

30.

Distinct RNA degradation pathways and 3' extensions of yeast non-coding RNA species.

Marquardt S, Hazelbaker DZ, Buratowski S.

Transcription. 2011 May;2(3):145-154.

31.

H3K4 trimethylation by Set1 promotes efficient termination by the Nrd1-Nab3-Sen1 pathway.

Terzi N, Churchman LS, Vasiljeva L, Weissman J, Buratowski S.

Mol Cell Biol. 2011 Sep;31(17):3569-83. doi: 10.1128/MCB.05590-11. Epub 2011 Jun 27.

32.

The specificity and topology of chromatin interaction pathways in yeast.

Lenstra TL, Benschop JJ, Kim T, Schulze JM, Brabers NA, Margaritis T, van de Pasch LA, van Heesch SA, Brok MO, Groot Koerkamp MJ, Ko CW, van Leenen D, Sameith K, van Hooff SR, Lijnzaad P, Kemmeren P, Hentrich T, Kobor MS, Buratowski S, Holstege FC.

Mol Cell. 2011 May 20;42(4):536-49. doi: 10.1016/j.molcel.2011.03.026.

33.

The role of cotranscriptional histone methylations.

Buratowski S, Kim T.

Cold Spring Harb Symp Quant Biol. 2010;75:95-102. doi: 10.1101/sqb.2010.75.036. Epub 2011 Mar 29.

34.

Cooperative interaction of transcription termination factors with the RNA polymerase II C-terminal domain.

Lunde BM, Reichow SL, Kim M, Suh H, Leeper TC, Yang F, Mutschler H, Buratowski S, Meinhart A, Varani G.

Nat Struct Mol Biol. 2010 Oct;17(10):1195-201. doi: 10.1038/nsmb.1893. Epub 2010 Sep 5.

35.

Leo1 subunit of the yeast paf1 complex binds RNA and contributes to complex recruitment.

Dermody JL, Buratowski S.

J Biol Chem. 2010 Oct 29;285(44):33671-9. doi: 10.1074/jbc.M110.140764. Epub 2010 Aug 23.

36.

RNA polymerase mapping during stress responses reveals widespread nonproductive transcription in yeast.

Kim TS, Liu CL, Yassour M, Holik J, Friedman N, Buratowski S, Rando OJ.

Genome Biol. 2010;11(7):R75. doi: 10.1186/gb-2010-11-7-r75. Epub 2010 Jul 16.

37.

Progression through the RNA polymerase II CTD cycle.

Buratowski S.

Mol Cell. 2009 Nov 25;36(4):541-6. doi: 10.1016/j.molcel.2009.10.019. Review.

38.

Reconstitution of heterochromatin-dependent transcriptional gene silencing.

Johnson A, Li G, Sikorski TW, Buratowski S, Woodcock CL, Moazed D.

Mol Cell. 2009 Sep 24;35(6):769-81. doi: 10.1016/j.molcel.2009.07.030.

39.

Phosphorylation of the yeast Rpb1 C-terminal domain at serines 2, 5, and 7.

Kim M, Suh H, Cho EJ, Buratowski S.

J Biol Chem. 2009 Sep 25;284(39):26421-6. doi: 10.1074/jbc.M109.028993. Epub 2009 Aug 13.

40.

The basal initiation machinery: beyond the general transcription factors.

Sikorski TW, Buratowski S.

Curr Opin Cell Biol. 2009 Jun;21(3):344-51. doi: 10.1016/j.ceb.2009.03.006. Epub 2009 May 4. Review.

41.

Dimethylation of H3K4 by Set1 recruits the Set3 histone deacetylase complex to 5' transcribed regions.

Kim T, Buratowski S.

Cell. 2009 Apr 17;137(2):259-72. doi: 10.1016/j.cell.2009.02.045.

42.

Ctk1 promotes dissociation of basal transcription factors from elongating RNA polymerase II.

Ahn SH, Keogh MC, Buratowski S.

EMBO J. 2009 Feb 4;28(3):205-12. doi: 10.1038/emboj.2008.280. Epub 2009 Jan 8.

43.

Transcription. Gene expression--where to start?

Buratowski S.

Science. 2008 Dec 19;322(5909):1804-5. doi: 10.1126/science.1168805. No abstract available.

44.

Unphosphorylated SR-like protein Npl3 stimulates RNA polymerase II elongation.

Dermody JL, Dreyfuss JM, Villén J, Ogundipe B, Gygi SP, Park PJ, Ponticelli AS, Moore CL, Buratowski S, Bucheli ME.

PLoS One. 2008 Sep 26;3(9):e3273. doi: 10.1371/journal.pone.0003273.

45.

The Nrd1-Nab3-Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain.

Vasiljeva L, Kim M, Mutschler H, Buratowski S, Meinhart A.

Nat Struct Mol Biol. 2008 Aug;15(8):795-804. doi: 10.1038/nsmb.1468. Epub 2008 Jul 27.

46.

Purification of DNA-binding proteins using biotin/streptavidin affinity systems.

Chodosh LA, Buratowski S.

Curr Protoc Protein Sci. 2001 May;Chapter 9:Unit 9.7. doi: 10.1002/0471140864.ps0907s12.

PMID:
18429216
47.

Transcription termination and RNA degradation contribute to silencing of RNA polymerase II transcription within heterochromatin.

Vasiljeva L, Kim M, Terzi N, Soares LM, Buratowski S.

Mol Cell. 2008 Feb 15;29(3):313-23. doi: 10.1016/j.molcel.2008.01.011.

48.

Mobility shift DNA-binding assay using gel electrophoresis.

Buratowski S, Chodosh LA.

Curr Protoc Mol Biol. 2001 May;Chapter 12:Unit 12.2. doi: 10.1002/0471142727.mb1202s36.

PMID:
18265085
49.

The Rpb4 subunit of RNA polymerase II contributes to cotranscriptional recruitment of 3' processing factors.

Runner VM, Podolny V, Buratowski S.

Mol Cell Biol. 2008 Mar;28(6):1883-91. doi: 10.1128/MCB.01714-07. Epub 2008 Jan 14.

50.

Structure of the yeast SR protein Npl3 and Interaction with mRNA 3'-end processing signals.

Deka P, Bucheli ME, Moore C, Buratowski S, Varani G.

J Mol Biol. 2008 Jan 4;375(1):136-50. Epub 2007 Sep 16.

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